RNA–Protein interactions for RNA: ENST00000357881.8

RFX4-202, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 2,565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-202ENST00000357881 UBE2DNLQ8IWF7 75 aa4.96□□□□□ -1.62
RFX4-202ENST00000357881 TPRXLQ17RH7 258 aa4.95□□□□□ -1.62
RFX4-202ENST00000357881 C15orf56Q8N910 161 aa4.95□□□□□ -1.62
RFX4-202ENST00000357881 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
RFX4-202ENST00000357881 HERC1Q15751 4861 aa4.93□□□□□ -1.62
RFX4-202ENST00000357881 DEFB4AO15263 64 aa4.93□□□□□ -1.62
RFX4-202ENST00000357881 SPRR1AP35321 89 aa4.93□□□□□ -1.62
RFX4-202ENST00000357881 Q6ZSA8 131 aa4.92□□□□□ -1.62
RFX4-202ENST00000357881 APOBP04114 4563 aaKnown RBP4.91□□□□□ -1.62
RFX4-202ENST00000357881 MRPL34Q9BQ48 92 aaKnown RBP4.91□□□□□ -1.62
RFX4-202ENST00000357881 LRP1BQ9NZR2 4599 aa4.9□□□□□ -1.63
RFX4-202ENST00000357881 KRTAP13-3Q3SY46 172 aa4.89□□□□□ -1.63
RFX4-202ENST00000357881 CAMK2N1Q7Z7J9 78 aa4.88□□□□□ -1.63
RFX4-202ENST00000357881 PRO0255Q9UI72 69 aa4.87□□□□□ -1.63
RFX4-202ENST00000357881 SPART-AS1P0CW21 52 aa4.86□□□□□ -1.63
RFX4-202ENST00000357881 MYCBP2O75592 4640 aa4.85□□□□□ -1.63
RFX4-202ENST00000357881 C10orf95Q9H7T3 257 aa4.84□□□□□ -1.63
RFX4-202ENST00000357881 LELP1Q5T871 98 aa4.84□□□□□ -1.64
RFX4-202ENST00000357881 UBR4Q5T4S7 5183 aa4.83□□□□□ -1.64
RFX4-202ENST00000357881 HTN3P15516 51 aa4.82□□□□□ -1.64
RFX4-202ENST00000357881 SRRM2Q9UQ35 2752 aaKnown RBP4.82□□□□□ -1.64
RFX4-202ENST00000357881 KRTAP10-2P60368 255 aa4.8□□□□□ -1.64
RFX4-202ENST00000357881 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
RFX4-202ENST00000357881 KRTAP3-1Q9BYR8 98 aa4.8□□□□□ -1.64
RFX4-202ENST00000357881 DNAH5Q8TE73 4624 aa4.8□□□□□ -1.64
RFX4-202ENST00000357881 A0A1B0GU33 70 aa4.79□□□□□ -1.64
RFX4-202ENST00000357881 H3BNG1 76 aa4.79□□□□□ -1.64
RFX4-202ENST00000357881 ANAPC11Q9NYG5 84 aa4.79□□□□□ -1.64
RFX4-202ENST00000357881 A0A096LNI7 61 aa4.78□□□□□ -1.64
RFX4-202ENST00000357881 PRLHP81277 87 aa4.76□□□□□ -1.65
RFX4-202ENST00000357881 Q6ZRN7 208 aaPredicted RBP4.76□□□□□ -1.65
RFX4-202ENST00000357881 SPINK1P00995 79 aa4.75□□□□□ -1.65
RFX4-202ENST00000357881 KRTAP7-1Q8IUC3 87 aa4.75□□□□□ -1.65
RFX4-202ENST00000357881 PKHD1L1Q86WI1 4243 aa4.75□□□□□ -1.65
RFX4-202ENST00000357881 H1FX-AS1Q4G0G2 97 aa4.74□□□□□ -1.65
RFX4-202ENST00000357881 KRTAP10-1P60331 282 aa4.73□□□□□ -1.65
RFX4-202ENST00000357881 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
RFX4-202ENST00000357881 TYMSOSQ8TAI1 123 aa4.71□□□□□ -1.65
RFX4-202ENST00000357881 SPRR1BP22528 89 aa4.7□□□□□ -1.66
RFX4-202ENST00000357881 IGKV2D-30A0A075B6S6 120 aa4.67□□□□□ -1.66
RFX4-202ENST00000357881 SMR3BP02814 79 aaPredicted RBP4.67□□□□□ -1.66
RFX4-202ENST00000357881 KRTAP10-4P60372 401 aaPredicted RBP4.67□□□□□ -1.66
RFX4-202ENST00000357881 C14orf177Q52M58 125 aa4.65□□□□□ -1.66
RFX4-202ENST00000357881 KRTAP1-5Q9BYS1 174 aa4.65□□□□□ -1.66
RFX4-202ENST00000357881 LINC01556Q5JQF7 62 aa4.63□□□□□ -1.67
RFX4-202ENST00000357881 DNAH8Q96JB1 4490 aa4.63□□□□□ -1.67
RFX4-202ENST00000357881 MT1HL1P0DM35 61 aa4.62□□□□□ -1.67
RFX4-202ENST00000357881 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
RFX4-202ENST00000357881 RPL37P61927 97 aaKnown RBP4.62□□□□□ -1.67
RFX4-202ENST00000357881 FAT3Q8TDW7 4589 aa4.61□□□□□ -1.67
RFX4-202ENST00000357881 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
RFX4-202ENST00000357881 COX6B2Q6YFQ2 88 aa4.59□□□□□ -1.67
RFX4-202ENST00000357881 SPACA4Q8TDM5 124 aa4.59□□□□□ -1.67
RFX4-202ENST00000357881 FAT1Q14517 4588 aa4.59□□□□□ -1.68
RFX4-202ENST00000357881 RNF213Q63HN8 5207 aa4.58□□□□□ -1.68
RFX4-202ENST00000357881 TNXBP22105 4242 aa4.57□□□□□ -1.68
RFX4-202ENST00000357881 SPINK6Q6UWN8 80 aa4.57□□□□□ -1.68
RFX4-202ENST00000357881 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
RFX4-202ENST00000357881 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
RFX4-202ENST00000357881 R4GN34 69 aa4.52□□□□□ -1.69
RFX4-202ENST00000357881 FAT4Q6V0I7 4981 aa4.5□□□□□ -1.69
RFX4-202ENST00000357881 A0A0D9SG42 100 aa4.48□□□□□ -1.69
RFX4-202ENST00000357881 KRTAP10-8P60410 259 aa4.48□□□□□ -1.69
RFX4-202ENST00000357881 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
RFX4-202ENST00000357881 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
RFX4-202ENST00000357881 KRTAP13-4Q3LI77 160 aa4.42□□□□□ -1.7
RFX4-202ENST00000357881 S4R3F8 94 aa4.42□□□□□ -1.7
RFX4-202ENST00000357881 LRP1Q07954 4544 aaKnown RBP4.41□□□□□ -1.7
RFX4-202ENST00000357881 KRTAP13-1Q8IUC0 172 aa4.4□□□□□ -1.7
RFX4-202ENST00000357881 LRP2P98164 4655 aa4.39□□□□□ -1.71
RFX4-202ENST00000357881 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
RFX4-202ENST00000357881 KRTAP10-6P60371 365 aaPredicted RBP4.32□□□□□ -1.72
RFX4-202ENST00000357881 KRTAP9-7A8MTY7 169 aa4.31□□□□□ -1.72
RFX4-202ENST00000357881 KRTAP9-3Q9BYQ3 159 aa4.3□□□□□ -1.72
RFX4-202ENST00000357881 INE1O15225 51 aa4.28□□□□□ -1.72
RFX4-202ENST00000357881 MUC2Q02817 5179 aa4.26□□□□□ -1.73
RFX4-202ENST00000357881 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
RFX4-202ENST00000357881 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
RFX4-202ENST00000357881 KRTAP1-4P0C5Y4 121 aa4.1□□□□□ -1.75
RFX4-202ENST00000357881 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
RFX4-202ENST00000357881 LPAP08519 4548 aa4.07□□□□□ -1.76
RFX4-202ENST00000357881 KRTAP13-2Q52LG2 175 aa4.07□□□□□ -1.76
RFX4-202ENST00000357881 PP632Q6XCG6 107 aa4.03□□□□□ -1.77
RFX4-202ENST00000357881 RPS29P62273 56 aaKnown RBP4□□□□□ -1.77
RFX4-202ENST00000357881 MT1HP80294 61 aa3.97□□□□□ -1.77
RFX4-202ENST00000357881 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
RFX4-202ENST00000357881 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
RFX4-202ENST00000357881 M0QZ58 72 aa3.93□□□□□ -1.78
RFX4-202ENST00000357881 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
RFX4-202ENST00000357881 KRTAP19-2Q3LHN2 52 aa3.9□□□□□ -1.78
RFX4-202ENST00000357881 KRTAP4-1Q9BYQ7 146 aa3.86□□□□□ -1.79
RFX4-202ENST00000357881 FSIP2Q5CZC0 6907 aa3.8□□□□□ -1.8
RFX4-202ENST00000357881 M0R2T5 61 aa3.8□□□□□ -1.8
RFX4-202ENST00000357881 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
RFX4-202ENST00000357881 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
RFX4-202ENST00000357881 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
RFX4-202ENST00000357881 USH2AO75445 5202 aa3.72□□□□□ -1.81
RFX4-202ENST00000357881 FCGBPQ9Y6R7 5405 aaPredicted RBP3.69□□□□□ -1.82
RFX4-202ENST00000357881 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
RFX4-202ENST00000357881 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms