RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 DNAH8Q96JB1 4490 aa6.03□□□□□ -1.44
PSEN1-202ENST00000357710 Q8N1X5 172 aa6.02□□□□□ -1.45
PSEN1-202ENST00000357710 RYR3Q15413 4870 aa6.01□□□□□ -1.45
PSEN1-202ENST00000357710 PKHD1P08F94 4074 aa5.96□□□□□ -1.45
PSEN1-202ENST00000357710 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
PSEN1-202ENST00000357710 LRP1BQ9NZR2 4599 aa5.95□□□□□ -1.46
PSEN1-202ENST00000357710 XP32Q5T750 250 aa5.94□□□□□ -1.46
PSEN1-202ENST00000357710 DYNC1H1Q14204 4646 aaKnown RBP5.93□□□□□ -1.46
PSEN1-202ENST00000357710 LCE2AQ5TA79 106 aaPredicted RBP5.93□□□□□ -1.46
PSEN1-202ENST00000357710 SMR3BP02814 79 aaPredicted RBP5.91□□□□□ -1.46
PSEN1-202ENST00000357710 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
PSEN1-202ENST00000357710 S4R3F8 94 aa5.88□□□□□ -1.47
PSEN1-202ENST00000357710 APOBP04114 4563 aaKnown RBP5.87□□□□□ -1.47
PSEN1-202ENST00000357710 EPPK1P58107 5090 aaKnown RBP5.83□□□□□ -1.48
PSEN1-202ENST00000357710 KRTAP10-4P60372 401 aaPredicted RBP5.83□□□□□ -1.48
PSEN1-202ENST00000357710 VPS13BQ7Z7G8 4022 aa5.83□□□□□ -1.48
PSEN1-202ENST00000357710 KRTAP1-4P0C5Y4 121 aa5.83□□□□□ -1.48
PSEN1-202ENST00000357710 Q5VSD8 79 aa5.81□□□□□ -1.48
PSEN1-202ENST00000357710 A0A0D9SG42 100 aa5.8□□□□□ -1.48
PSEN1-202ENST00000357710 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
PSEN1-202ENST00000357710 KRTAP13-2Q52LG2 175 aa5.78□□□□□ -1.48
PSEN1-202ENST00000357710 KRTAP10-6P60371 365 aaPredicted RBP5.78□□□□□ -1.48
PSEN1-202ENST00000357710 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
PSEN1-202ENST00000357710 HSPG2P98160 4391 aa5.75□□□□□ -1.49
PSEN1-202ENST00000357710 FAT1Q14517 4588 aa5.74□□□□□ -1.49
PSEN1-202ENST00000357710 RYR1P21817 5038 aa5.73□□□□□ -1.49
PSEN1-202ENST00000357710 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
PSEN1-202ENST00000357710 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
PSEN1-202ENST00000357710 KIAA1109Q2LD37 5005 aa5.67□□□□□ -1.5
PSEN1-202ENST00000357710 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
PSEN1-202ENST00000357710 KRTAP17-1Q9BYP8 105 aa5.67□□□□□ -1.5
PSEN1-202ENST00000357710 LORP23490 312 aaPredicted RBP5.66□□□□□ -1.5
PSEN1-202ENST00000357710 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
PSEN1-202ENST00000357710 INE1O15225 51 aa5.64□□□□□ -1.51
PSEN1-202ENST00000357710 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
PSEN1-202ENST00000357710 R4GN34 69 aa5.58□□□□□ -1.52
PSEN1-202ENST00000357710 PP632Q6XCG6 107 aa5.57□□□□□ -1.52
PSEN1-202ENST00000357710 BIRC6Q9NR09 4857 aa5.56□□□□□ -1.52
PSEN1-202ENST00000357710 KRTAP4-5Q9BYR2 181 aa5.55□□□□□ -1.52
PSEN1-202ENST00000357710 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
PSEN1-202ENST00000357710 FAT3Q8TDW7 4589 aa5.53□□□□□ -1.52
PSEN1-202ENST00000357710 LRP1Q07954 4544 aaKnown RBP5.52□□□□□ -1.53
PSEN1-202ENST00000357710 TNXBP22105 4242 aa5.52□□□□□ -1.53
PSEN1-202ENST00000357710 M0QZ58 72 aa5.51□□□□□ -1.53
PSEN1-202ENST00000357710 PCLOQ9Y6V0 5065 aa5.5□□□□□ -1.53
PSEN1-202ENST00000357710 HERC2O95714 4834 aa5.47□□□□□ -1.53
PSEN1-202ENST00000357710 MYCBP2O75592 4640 aa5.46□□□□□ -1.54
PSEN1-202ENST00000357710 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
PSEN1-202ENST00000357710 DMBT1Q9UGM3 2413 aaPredicted RBP5.44□□□□□ -1.54
PSEN1-202ENST00000357710 C9orf92A6NGG3 77 aa5.42□□□□□ -1.54
PSEN1-202ENST00000357710 ABCA13Q86UQ4 5058 aa5.41□□□□□ -1.54
PSEN1-202ENST00000357710 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
PSEN1-202ENST00000357710 HERC1Q15751 4861 aa5.31□□□□□ -1.56
PSEN1-202ENST00000357710 LPAP08519 4548 aa5.13□□□□□ -1.59
PSEN1-202ENST00000357710 LRP2P98164 4655 aa5.09□□□□□ -1.6
PSEN1-202ENST00000357710 UBR4Q5T4S7 5183 aa5.07□□□□□ -1.6
PSEN1-202ENST00000357710 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
PSEN1-202ENST00000357710 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
PSEN1-202ENST00000357710 MUC17Q685J3 4493 aa5.02□□□□□ -1.61
PSEN1-202ENST00000357710 KRTAP4-1Q9BYQ7 146 aa4.98□□□□□ -1.61
PSEN1-202ENST00000357710 MUC2Q02817 5179 aa4.92□□□□□ -1.62
PSEN1-202ENST00000357710 TNP1P09430 55 aa4.91□□□□□ -1.62
PSEN1-202ENST00000357710 KRTAP19-2Q3LHN2 52 aa4.83□□□□□ -1.64
PSEN1-202ENST00000357710 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
PSEN1-202ENST00000357710 FAT4Q6V0I7 4981 aa4.69□□□□□ -1.66
PSEN1-202ENST00000357710 MT1HP80294 61 aa4.67□□□□□ -1.66
PSEN1-202ENST00000357710 M0R2T5 61 aa4.66□□□□□ -1.66
PSEN1-202ENST00000357710 KRTAP10-10P60014 251 aa4.65□□□□□ -1.67
PSEN1-202ENST00000357710 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
PSEN1-202ENST00000357710 MT2AP02795 61 aa4.48□□□□□ -1.69
PSEN1-202ENST00000357710 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
PSEN1-202ENST00000357710 MT1FP04733 61 aa4.45□□□□□ -1.7
PSEN1-202ENST00000357710 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
PSEN1-202ENST00000357710 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
PSEN1-202ENST00000357710 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
PSEN1-202ENST00000357710 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
PSEN1-202ENST00000357710 KRTAP19-1Q8IUB9 90 aa4.35□□□□□ -1.71
PSEN1-202ENST00000357710 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
PSEN1-202ENST00000357710 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
PSEN1-202ENST00000357710 KRTAP19-8Q3LI54 63 aa4.27□□□□□ -1.73
PSEN1-202ENST00000357710 USH2AO75445 5202 aa4.22□□□□□ -1.73
PSEN1-202ENST00000357710 KRTAP12-3P60328 96 aa4.21□□□□□ -1.73
PSEN1-202ENST00000357710 MT1BP07438 61 aa4.2□□□□□ -1.74
PSEN1-202ENST00000357710 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
PSEN1-202ENST00000357710 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
PSEN1-202ENST00000357710 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
PSEN1-202ENST00000357710 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
PSEN1-202ENST00000357710 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
PSEN1-202ENST00000357710 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
PSEN1-202ENST00000357710 KRTAP9-2Q9BYQ4 174 aa4.14□□□□□ -1.75
PSEN1-202ENST00000357710 KRTAP9-9Q9BYP9 154 aa4.11□□□□□ -1.75
PSEN1-202ENST00000357710 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
PSEN1-202ENST00000357710 MT1XP80297 61 aa4.07□□□□□ -1.76
PSEN1-202ENST00000357710 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
PSEN1-202ENST00000357710 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
PSEN1-202ENST00000357710 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
PSEN1-202ENST00000357710 KRTAP19-6Q3LI70 58 aa3.97□□□□□ -1.77
PSEN1-202ENST00000357710 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
PSEN1-202ENST00000357710 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
PSEN1-202ENST00000357710 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms