RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 KRTAP3-1Q9BYR8 98 aa2.19□□□□□ -2.06
SYNE2-203ENST00000357395 SMG1Q96Q15 3661 aaKnown RBP2.19□□□□□ -2.06
SYNE2-203ENST00000357395 CUBNO60494 3623 aa2.18□□□□□ -2.06
SYNE2-203ENST00000357395 RELNP78509 3460 aa2.15□□□□□ -2.07
SYNE2-203ENST00000357395 LYSTQ99698 3801 aa2.13□□□□□ -2.07
SYNE2-203ENST00000357395 KRTAP3-2Q9BYR7 98 aa2.11□□□□□ -2.07
SYNE2-203ENST00000357395 CSMD1Q96PZ7 3565 aa2.11□□□□□ -2.07
SYNE2-203ENST00000357395 VPS13DQ5THJ4 4388 aa2.1□□□□□ -2.07
SYNE2-203ENST00000357395 KRTAP10-10P60014 251 aa2.09□□□□□ -2.07
SYNE2-203ENST00000357395 KRTAP10-12P60413 245 aa2.09□□□□□ -2.07
SYNE2-203ENST00000357395 ANK3Q12955 4377 aaKnown RBP2.09□□□□□ -2.08
SYNE2-203ENST00000357395 DYNC2H1Q8NCM8 4307 aaKnown RBP2.09□□□□□ -2.08
SYNE2-203ENST00000357395 DNAH17Q9UFH2 4485 aa2.09□□□□□ -2.08
SYNE2-203ENST00000357395 CSMD3Q7Z407 3707 aa2.07□□□□□ -2.08
SYNE2-203ENST00000357395 DNAH8Q96JB1 4490 aa2.07□□□□□ -2.08
SYNE2-203ENST00000357395 DNAH9Q9NYC9 4486 aa2.05□□□□□ -2.08
SYNE2-203ENST00000357395 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
SYNE2-203ENST00000357395 KRTAP3-3Q9BYR6 98 aa2.04□□□□□ -2.08
SYNE2-203ENST00000357395 CSMD2Q7Z408 3487 aa2.04□□□□□ -2.08
SYNE2-203ENST00000357395 SVEP1Q4LDE5 3571 aa2.03□□□□□ -2.08
SYNE2-203ENST00000357395 PLECQ15149 4684 aaKnown RBP2.01□□□□□ -2.09
SYNE2-203ENST00000357395 A0A1B0GVY2 172 aa2.01□□□□□ -2.09
SYNE2-203ENST00000357395 PKHD1P08F94 4074 aa2□□□□□ -2.09
SYNE2-203ENST00000357395 DNAH5Q8TE73 4624 aa1.99□□□□□ -2.09
SYNE2-203ENST00000357395 PKD1P98161 4303 aa1.99□□□□□ -2.09
SYNE2-203ENST00000357395 SACSQ9NZJ4 4579 aa1.99□□□□□ -2.09
SYNE2-203ENST00000357395 SPRR5A0A1B0GTR4 108 aa1.97□□□□□ -2.09
SYNE2-203ENST00000357395 APOBP04114 4563 aaKnown RBP1.97□□□□□ -2.09
SYNE2-203ENST00000357395 LORP23490 312 aaPredicted RBP1.97□□□□□ -2.09
SYNE2-203ENST00000357395 DYNC1H1Q14204 4646 aaKnown RBP1.95□□□□□ -2.1
SYNE2-203ENST00000357395 HSPG2P98160 4391 aa1.94□□□□□ -2.1
SYNE2-203ENST00000357395 PKHD1L1Q86WI1 4243 aa1.93□□□□□ -2.1
SYNE2-203ENST00000357395 FAT3Q8TDW7 4589 aa1.91□□□□□ -2.1
SYNE2-203ENST00000357395 FAT2Q9NYQ8 4349 aa1.91□□□□□ -2.1
SYNE2-203ENST00000357395 LRP1Q07954 4544 aaKnown RBP1.91□□□□□ -2.1
SYNE2-203ENST00000357395 SPRR2GQ9BYE4 73 aa1.91□□□□□ -2.1
SYNE2-203ENST00000357395 KRTAP8-1Q8IUC2 63 aa1.9□□□□□ -2.11
SYNE2-203ENST00000357395 TNXBP22105 4242 aa1.88□□□□□ -2.11
SYNE2-203ENST00000357395 LCE3AQ5TA76 89 aa1.86□□□□□ -2.11
SYNE2-203ENST00000357395 MYCBP2O75592 4640 aa1.85□□□□□ -2.11
SYNE2-203ENST00000357395 LCE3CQ5T5A8 94 aa1.84□□□□□ -2.11
SYNE2-203ENST00000357395 LRP1BQ9NZR2 4599 aa1.84□□□□□ -2.11
SYNE2-203ENST00000357395 RYR1P21817 5038 aa1.83□□□□□ -2.12
SYNE2-203ENST00000357395 FAT1Q14517 4588 aa1.8□□□□□ -2.12
SYNE2-203ENST00000357395 MT1HL1P0DM35 61 aa1.78□□□□□ -2.12
SYNE2-203ENST00000357395 KRTAP10-4P60372 401 aaPredicted RBP1.78□□□□□ -2.12
SYNE2-203ENST00000357395 KRTAP10-5P60370 271 aa1.77□□□□□ -2.13
SYNE2-203ENST00000357395 STARD9Q9P2P6 4700 aa1.71□□□□□ -2.14
SYNE2-203ENST00000357395 KRTAP12-4P60329 112 aa1.69□□□□□ -2.14
SYNE2-203ENST00000357395 CRCT1Q9UGL9 99 aa1.67□□□□□ -2.14
SYNE2-203ENST00000357395 KRTAP10-7P60409 375 aaPredicted RBP1.67□□□□□ -2.14
SYNE2-203ENST00000357395 KRTAP19-8Q3LI54 63 aa1.66□□□□□ -2.14
SYNE2-203ENST00000357395 RYR2Q92736 4967 aa1.65□□□□□ -2.15
SYNE2-203ENST00000357395 KRTAP19-5Q3LI72 72 aa1.64□□□□□ -2.15
SYNE2-203ENST00000357395 LCE3EQ5T5B0 92 aa1.64□□□□□ -2.15
SYNE2-203ENST00000357395 DNHD1Q96M86 4753 aa1.63□□□□□ -2.15
SYNE2-203ENST00000357395 LCE3DQ9BYE3 92 aa1.63□□□□□ -2.15
SYNE2-203ENST00000357395 SPRR2AP35326 72 aa1.62□□□□□ -2.15
SYNE2-203ENST00000357395 RYR3Q15413 4870 aa1.61□□□□□ -2.15
SYNE2-203ENST00000357395 MT1LQ93083 61 aa1.6□□□□□ -2.15
SYNE2-203ENST00000357395 HERC2O95714 4834 aa1.6□□□□□ -2.15
SYNE2-203ENST00000357395 BIRC6Q9NR09 4857 aa1.6□□□□□ -2.15
SYNE2-203ENST00000357395 MT1GP13640 62 aa1.6□□□□□ -2.15
SYNE2-203ENST00000357395 MUC17Q685J3 4493 aa1.59□□□□□ -2.15
SYNE2-203ENST00000357395 MT1AP04731 61 aa1.59□□□□□ -2.16
SYNE2-203ENST00000357395 MT1EP04732 61 aa1.58□□□□□ -2.16
SYNE2-203ENST00000357395 SPRR2BP35325 72 aa1.57□□□□□ -2.16
SYNE2-203ENST00000357395 MT1FP04733 61 aa1.55□□□□□ -2.16
SYNE2-203ENST00000357395 KRTAP2-3P0C7H8 128 aa1.55□□□□□ -2.16
SYNE2-203ENST00000357395 KRTAP2-4Q9BYR9 128 aa1.55□□□□□ -2.16
SYNE2-203ENST00000357395 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
SYNE2-203ENST00000357395 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
SYNE2-203ENST00000357395 MT1HP80294 61 aa1.54□□□□□ -2.16
SYNE2-203ENST00000357395 LRP2P98164 4655 aa1.54□□□□□ -2.16
SYNE2-203ENST00000357395 MT2AP02795 61 aa1.53□□□□□ -2.16
SYNE2-203ENST00000357395 MT1XP80297 61 aa1.53□□□□□ -2.16
SYNE2-203ENST00000357395 HYDINQ4G0P3 5121 aa1.53□□□□□ -2.17
SYNE2-203ENST00000357395 KRTAP19-1Q8IUB9 90 aa1.51□□□□□ -2.17
SYNE2-203ENST00000357395 KRTAP4-5Q9BYR2 181 aa1.5□□□□□ -2.17
SYNE2-203ENST00000357395 KMT2CQ8NEZ4 4911 aaKnown RBP1.5□□□□□ -2.17
SYNE2-203ENST00000357395 SPRR2FQ96RM1 72 aa1.5□□□□□ -2.17
SYNE2-203ENST00000357395 SPRR2DP22532 72 aa1.49□□□□□ -2.17
SYNE2-203ENST00000357395 PCLOQ9Y6V0 5065 aa1.49□□□□□ -2.17
SYNE2-203ENST00000357395 HERC1Q15751 4861 aa1.47□□□□□ -2.17
SYNE2-203ENST00000357395 LCE3BQ5TA77 95 aa1.46□□□□□ -2.18
SYNE2-203ENST00000357395 MT1MQ8N339 61 aa1.46□□□□□ -2.18
SYNE2-203ENST00000357395 KRTAP19-3Q7Z4W3 81 aa1.46□□□□□ -2.18
SYNE2-203ENST00000357395 MDN1Q9NU22 5596 aa1.45□□□□□ -2.18
SYNE2-203ENST00000357395 LPAP08519 4548 aa1.43□□□□□ -2.18
SYNE2-203ENST00000357395 PRM1P04553 51 aa1.43□□□□□ -2.18
SYNE2-203ENST00000357395 EPPK1P58107 5090 aaKnown RBP1.42□□□□□ -2.18
SYNE2-203ENST00000357395 HMCN2Q8NDA2 5059 aa1.42□□□□□ -2.18
SYNE2-203ENST00000357395 LCE2BO14633 110 aa1.42□□□□□ -2.18
SYNE2-203ENST00000357395 MT1BP07438 61 aa1.41□□□□□ -2.18
SYNE2-203ENST00000357395 KRTAP9-8Q9BYQ0 159 aa1.4□□□□□ -2.19
SYNE2-203ENST00000357395 SPRR2EP22531 72 aa1.39□□□□□ -2.19
SYNE2-203ENST00000357395 LCE2CQ5TA81 110 aa1.39□□□□□ -2.19
SYNE2-203ENST00000357395 UBR4Q5T4S7 5183 aa1.39□□□□□ -2.19
SYNE2-203ENST00000357395 KRTAP9-3Q9BYQ3 159 aa1.38□□□□□ -2.19
SYNE2-203ENST00000357395 RNF213Q63HN8 5207 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms