RNA–Protein interactions for RNA: ENST00000357246.3

MAP1LC3C-201, Transcript of microtubule associated protein 1 light chain 3 gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3C, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3C-201ENST00000357246 A6NED7 52 aa4.28□□□□□ -1.72
MAP1LC3C-201ENST00000357246 HRES1P13985 223 aa4.28□□□□□ -1.72
MAP1LC3C-201ENST00000357246 MT-ATP8P03928 68 aa4.27□□□□□ -1.73
MAP1LC3C-201ENST00000357246 ADM2Q7Z4H4 148 aa4.26□□□□□ -1.73
MAP1LC3C-201ENST00000357246 FLGP20930 4061 aaPredicted RBP4.26□□□□□ -1.73
MAP1LC3C-201ENST00000357246 SPINK7P58062 85 aa4.25□□□□□ -1.73
MAP1LC3C-201ENST00000357246 MMP24-AS1A0A0U1RRL7 71 aa4.24□□□□□ -1.73
MAP1LC3C-201ENST00000357246 TMEM254Q8TBM7 123 aa4.24□□□□□ -1.73
MAP1LC3C-201ENST00000357246 K7EQZ3 153 aa4.23□□□□□ -1.73
MAP1LC3C-201ENST00000357246 MRPL34Q9BQ48 92 aaKnown RBP4.23□□□□□ -1.73
MAP1LC3C-201ENST00000357246 UBL5Q9BZL1 73 aa4.23□□□□□ -1.73
MAP1LC3C-201ENST00000357246 hDV103S1A0JD37 113 aa4.22□□□□□ -1.73
MAP1LC3C-201ENST00000357246 COX7CP15954 63 aa4.21□□□□□ -1.74
MAP1LC3C-201ENST00000357246 LINC00846Q9NV44 126 aa4.21□□□□□ -1.74
MAP1LC3C-201ENST00000357246 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
MAP1LC3C-201ENST00000357246 LINC00643Q86TS7 51 aa4.19□□□□□ -1.74
MAP1LC3C-201ENST00000357246 A6NN06 94 aa4.17□□□□□ -1.74
MAP1LC3C-201ENST00000357246 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
MAP1LC3C-201ENST00000357246 WFDC13Q8IUB5 93 aa4.17□□□□□ -1.74
MAP1LC3C-201ENST00000357246 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
MAP1LC3C-201ENST00000357246 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
MAP1LC3C-201ENST00000357246 ATP5EP2Q5VTU8 51 aa4.16□□□□□ -1.74
MAP1LC3C-201ENST00000357246 CASC2Q6XLA1 102 aa4.16□□□□□ -1.74
MAP1LC3C-201ENST00000357246 Q8N9L7 120 aa4.16□□□□□ -1.74
MAP1LC3C-201ENST00000357246 Q5W150 140 aa4.15□□□□□ -1.75
MAP1LC3C-201ENST00000357246 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
MAP1LC3C-201ENST00000357246 MT2AP02795 61 aa4.13□□□□□ -1.75
MAP1LC3C-201ENST00000357246 SPANXA2-OT1Q8N9U9 137 aa4.13□□□□□ -1.75
MAP1LC3C-201ENST00000357246 HCG22E2RYF7 251 aa4.12□□□□□ -1.75
MAP1LC3C-201ENST00000357246 C1orf64Q8NEQ6 169 aa4.12□□□□□ -1.75
MAP1LC3C-201ENST00000357246 TRAV7A0A075B6U4 112 aa4.1□□□□□ -1.75
MAP1LC3C-201ENST00000357246 H3BPC8 53 aa4.1□□□□□ -1.75
MAP1LC3C-201ENST00000357246 MT1FP04733 61 aa4.1□□□□□ -1.75
MAP1LC3C-201ENST00000357246 H1FX-AS1Q4G0G2 97 aa4.1□□□□□ -1.75
MAP1LC3C-201ENST00000357246 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.75
MAP1LC3C-201ENST00000357246 IGKV2-30P06310 120 aa4.09□□□□□ -1.75
MAP1LC3C-201ENST00000357246 KRTAP10-10P60014 251 aa4.09□□□□□ -1.75
MAP1LC3C-201ENST00000357246 ATOX1O00244 68 aa4.08□□□□□ -1.76
MAP1LC3C-201ENST00000357246 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
MAP1LC3C-201ENST00000357246 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
MAP1LC3C-201ENST00000357246 TP53AIP1Q9HCN2 124 aa4.07□□□□□ -1.76
MAP1LC3C-201ENST00000357246 ROMO1P60602 79 aa4.06□□□□□ -1.76
MAP1LC3C-201ENST00000357246 Q1T7F1 81 aa4.03□□□□□ -1.76
MAP1LC3C-201ENST00000357246 A0A087WVE0 104 aa4.01□□□□□ -1.77
MAP1LC3C-201ENST00000357246 USH2AO75445 5202 aa4□□□□□ -1.77
MAP1LC3C-201ENST00000357246 KRTAP15-1Q3LI76 137 aa4□□□□□ -1.77
MAP1LC3C-201ENST00000357246 SSPOA2VEC9 5147 aa4□□□□□ -1.77
MAP1LC3C-201ENST00000357246 SERP2Q8N6R1 65 aa3.99□□□□□ -1.77
MAP1LC3C-201ENST00000357246 CYP4F30PQ9H0H9 118 aa3.98□□□□□ -1.77
MAP1LC3C-201ENST00000357246 NDUFC1O43677 76 aa3.97□□□□□ -1.77
MAP1LC3C-201ENST00000357246 A0A1B0GU33 70 aa3.96□□□□□ -1.78
MAP1LC3C-201ENST00000357246 TRAV22A0A0B4J277 110 aa3.95□□□□□ -1.78
MAP1LC3C-201ENST00000357246 LOC101927531A0A1B0GV80 90 aa3.94□□□□□ -1.78
MAP1LC3C-201ENST00000357246 CSAG1Q6PB30 78 aa3.94□□□□□ -1.78
MAP1LC3C-201ENST00000357246 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
MAP1LC3C-201ENST00000357246 S4R3F8 94 aa3.94□□□□□ -1.78
MAP1LC3C-201ENST00000357246 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
MAP1LC3C-201ENST00000357246 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
MAP1LC3C-201ENST00000357246 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
MAP1LC3C-201ENST00000357246 KRTAP19-6Q3LI70 58 aa3.9□□□□□ -1.79
MAP1LC3C-201ENST00000357246 MACF1Q9UPN3 7388 aaKnown RBP3.9□□□□□ -1.79
MAP1LC3C-201ENST00000357246 H0Y9P7 68 aa3.89□□□□□ -1.79
MAP1LC3C-201ENST00000357246 SPTSSBQ8NFR3 76 aa3.89□□□□□ -1.79
MAP1LC3C-201ENST00000357246 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
MAP1LC3C-201ENST00000357246 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
MAP1LC3C-201ENST00000357246 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
MAP1LC3C-201ENST00000357246 CDC42SE1Q9NRR8 79 aa3.87□□□□□ -1.79
MAP1LC3C-201ENST00000357246 LINC00208Q96KT6 92 aa3.85□□□□□ -1.79
MAP1LC3C-201ENST00000357246 CYSTM1Q9H1C7 97 aa3.85□□□□□ -1.79
MAP1LC3C-201ENST00000357246 H7BZZ5 65 aa3.84□□□□□ -1.79
MAP1LC3C-201ENST00000357246 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
MAP1LC3C-201ENST00000357246 P0C880 135 aa3.83□□□□□ -1.8
MAP1LC3C-201ENST00000357246 C20orf197Q8N268 126 aa3.83□□□□□ -1.8
MAP1LC3C-201ENST00000357246 KLKP1Q107X0 134 aa3.82□□□□□ -1.8
MAP1LC3C-201ENST00000357246 KRTAP19-8Q3LI54 63 aa3.81□□□□□ -1.8
MAP1LC3C-201ENST00000357246 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
MAP1LC3C-201ENST00000357246 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
MAP1LC3C-201ENST00000357246 CRIPTQ9P021 101 aa3.8□□□□□ -1.8
MAP1LC3C-201ENST00000357246 H0YAA0 97 aa3.79□□□□□ -1.8
MAP1LC3C-201ENST00000357246 SNURFQ9Y675 71 aa3.79□□□□□ -1.8
MAP1LC3C-201ENST00000357246 MT1BP07438 61 aa3.78□□□□□ -1.8
MAP1LC3C-201ENST00000357246 Q5VV11 94 aa3.78□□□□□ -1.8
MAP1LC3C-201ENST00000357246 R4GN34 69 aa3.74□□□□□ -1.81
MAP1LC3C-201ENST00000357246 CHKB-CPT1BH3BT56 60 aa3.73□□□□□ -1.81
MAP1LC3C-201ENST00000357246 DMAC1Q96GE9 116 aa3.73□□□□□ -1.81
MAP1LC3C-201ENST00000357246 PRO2289Q9P1D8 64 aa3.72□□□□□ -1.81
MAP1LC3C-201ENST00000357246 NEBP20929 6669 aa3.72□□□□□ -1.81
MAP1LC3C-201ENST00000357246 KRTAP10-5P60370 271 aa3.7□□□□□ -1.82
MAP1LC3C-201ENST00000357246 ACYP2P14621 99 aa3.69□□□□□ -1.82
MAP1LC3C-201ENST00000357246 A8MU10 97 aa3.63□□□□□ -1.83
MAP1LC3C-201ENST00000357246 MUC12Q9UKN1 5478 aa3.62□□□□□ -1.83
MAP1LC3C-201ENST00000357246 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
MAP1LC3C-201ENST00000357246 PLAC4Q8WY50 150 aa3.59□□□□□ -1.83
MAP1LC3C-201ENST00000357246 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
MAP1LC3C-201ENST00000357246 M0QZ58 72 aa3.58□□□□□ -1.84
MAP1LC3C-201ENST00000357246 COA5Q86WW8 74 aa3.58□□□□□ -1.84
MAP1LC3C-201ENST00000357246 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
MAP1LC3C-201ENST00000357246 MT1XP80297 61 aa3.56□□□□□ -1.84
MAP1LC3C-201ENST00000357246 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
MAP1LC3C-201ENST00000357246 KMT2DO14686 5537 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms