RNA–Protein interactions for RNA: ENST00000356489.9

BCKDHB-202, Transcript of branched chain keto acid dehydrogenase E1 subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCKDHB, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHB-202ENST00000356489 MT1FP04733 61 aa11.16□□□□□ -0.62
BCKDHB-202ENST00000356489 SPANXA2-OT1Q8N9U9 137 aa11.15□□□□□ -0.62
BCKDHB-202ENST00000356489 CYSTM1Q9H1C7 97 aa11.15□□□□□ -0.62
BCKDHB-202ENST00000356489 NDUFC1O43677 76 aa11.11□□□□□ -0.63
BCKDHB-202ENST00000356489 LCE2DQ5TA82 110 aaPredicted RBP11.11□□□□□ -0.63
BCKDHB-202ENST00000356489 ACYP2P14621 99 aa11.08□□□□□ -0.64
BCKDHB-202ENST00000356489 H7BZZ5 65 aa11.07□□□□□ -0.64
BCKDHB-202ENST00000356489 KRTAP10-10P60014 251 aa11.07□□□□□ -0.64
BCKDHB-202ENST00000356489 CCDC179H3BU77 68 aa11.06□□□□□ -0.64
BCKDHB-202ENST00000356489 KRTAP9-2Q9BYQ4 174 aa11.04□□□□□ -0.64
BCKDHB-202ENST00000356489 KRTAP9-3Q9BYQ3 159 aa10.96□□□□□ -0.65
BCKDHB-202ENST00000356489 H0YAA0 97 aa10.89□□□□□ -0.67
BCKDHB-202ENST00000356489 CHKB-CPT1BH3BT56 60 aa10.87□□□□□ -0.67
BCKDHB-202ENST00000356489 COA5Q86WW8 74 aa10.81□□□□□ -0.68
BCKDHB-202ENST00000356489 SPTSSBQ8NFR3 76 aa10.79□□□□□ -0.68
BCKDHB-202ENST00000356489 LCE2BO14633 110 aa10.79□□□□□ -0.68
BCKDHB-202ENST00000356489 USH2AO75445 5202 aa10.78□□□□□ -0.68
BCKDHB-202ENST00000356489 ADM2Q7Z4H4 148 aa10.78□□□□□ -0.68
BCKDHB-202ENST00000356489 FSIP2Q5CZC0 6907 aa10.78□□□□□ -0.68
BCKDHB-202ENST00000356489 KRTAP19-1Q8IUB9 90 aa10.7□□□□□ -0.7
BCKDHB-202ENST00000356489 ATP5EP56381 51 aaPredicted RBP10.68□□□□□ -0.7
BCKDHB-202ENST00000356489 KRTAP3-2Q9BYR7 98 aa10.68□□□□□ -0.7
BCKDHB-202ENST00000356489 P0C880 135 aa10.65□□□□□ -0.7
BCKDHB-202ENST00000356489 TMEM258P61165 79 aa10.65□□□□□ -0.7
BCKDHB-202ENST00000356489 CRIPTQ9P021 101 aa10.65□□□□□ -0.7
BCKDHB-202ENST00000356489 SPRR2GQ9BYE4 73 aa10.64□□□□□ -0.71
BCKDHB-202ENST00000356489 SSPOA2VEC9 5147 aa10.59□□□□□ -0.71
BCKDHB-202ENST00000356489 CRCT1Q9UGL9 99 aa10.53□□□□□ -0.72
BCKDHB-202ENST00000356489 PCP4P48539 62 aa10.5□□□□□ -0.73
BCKDHB-202ENST00000356489 KRTAP19-8Q3LI54 63 aa10.48□□□□□ -0.73
BCKDHB-202ENST00000356489 KRTAP9-6A0A140TA67 174 aa10.44□□□□□ -0.74
BCKDHB-202ENST00000356489 R4GN34 69 aa10.44□□□□□ -0.74
BCKDHB-202ENST00000356489 MT1BP07438 61 aa10.41□□□□□ -0.74
BCKDHB-202ENST00000356489 M0QZ58 72 aa10.39□□□□□ -0.75
BCKDHB-202ENST00000356489 Q5VV11 94 aa10.38□□□□□ -0.75
BCKDHB-202ENST00000356489 SEC61GP60059 68 aa10.33□□□□□ -0.76
BCKDHB-202ENST00000356489 SERP1Q9Y6X1 66 aa10.31□□□□□ -0.76
BCKDHB-202ENST00000356489 KRTAP19-6Q3LI70 58 aa10.28□□□□□ -0.76
BCKDHB-202ENST00000356489 KRTAP13-4Q3LI77 160 aa10.23□□□□□ -0.77
BCKDHB-202ENST00000356489 A0A1B0GU69 56 aa10.22□□□□□ -0.77
BCKDHB-202ENST00000356489 FCGBPQ9Y6R7 5405 aaPredicted RBP10.21□□□□□ -0.78
BCKDHB-202ENST00000356489 LINC01554Q52M75 96 aa10.2□□□□□ -0.78
BCKDHB-202ENST00000356489 LINC01558Q9Y6Z2 57 aa10.17□□□□□ -0.78
BCKDHB-202ENST00000356489 A0A1B0GU33 70 aa10.13□□□□□ -0.79
BCKDHB-202ENST00000356489 PLAC4Q8WY50 150 aa10.07□□□□□ -0.8
BCKDHB-202ENST00000356489 PRR15LQ9BU68 103 aa10.06□□□□□ -0.8
BCKDHB-202ENST00000356489 SPATA8Q6RVD6 105 aa10.05□□□□□ -0.8
BCKDHB-202ENST00000356489 A6NN06 94 aa10.02□□□□□ -0.81
BCKDHB-202ENST00000356489 KRTAP10-5P60370 271 aa10.02□□□□□ -0.81
BCKDHB-202ENST00000356489 RPS28P62857 69 aaKnown RBP9.97□□□□□ -0.81
BCKDHB-202ENST00000356489 SMIM26A0A096LP01 95 aa9.92□□□□□ -0.82
BCKDHB-202ENST00000356489 Q1T7F1 81 aa9.92□□□□□ -0.82
BCKDHB-202ENST00000356489 A0A0D9SG42 100 aa9.92□□□□□ -0.82
BCKDHB-202ENST00000356489 MT1XP80297 61 aa9.92□□□□□ -0.82
BCKDHB-202ENST00000356489 V9GYY9 64 aa9.91□□□□□ -0.82
BCKDHB-202ENST00000356489 PRO2289Q9P1D8 64 aa9.83□□□□□ -0.84
BCKDHB-202ENST00000356489 A8MU10 97 aa9.81□□□□□ -0.84
BCKDHB-202ENST00000356489 MACF1Q9UPN3 7388 aaKnown RBP9.81□□□□□ -0.84
BCKDHB-202ENST00000356489 PSPHP1O15172 72 aa9.8□□□□□ -0.84
BCKDHB-202ENST00000356489 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.79□□□□□ -0.84
BCKDHB-202ENST00000356489 UQCR11O14957 56 aa9.77□□□□□ -0.84
BCKDHB-202ENST00000356489 KRTAP12-1P59990 96 aa9.77□□□□□ -0.85
BCKDHB-202ENST00000356489 KRTAP12-2P59991 146 aa9.72□□□□□ -0.85
BCKDHB-202ENST00000356489 SPINT4Q6UDR6 99 aa9.72□□□□□ -0.85
BCKDHB-202ENST00000356489 CAMK2N1Q7Z7J9 78 aa9.67□□□□□ -0.86
BCKDHB-202ENST00000356489 SYNE2Q8WXH0 6885 aaKnown RBP9.61□□□□□ -0.87
BCKDHB-202ENST00000356489 MIR22HGQ0VDD5 57 aa9.61□□□□□ -0.87
BCKDHB-202ENST00000356489 KMT2DO14686 5537 aa9.49□□□□□ -0.89
BCKDHB-202ENST00000356489 A6NED7 52 aa9.48□□□□□ -0.89
BCKDHB-202ENST00000356489 KRTAP10-7P60409 375 aaPredicted RBP9.47□□□□□ -0.89
BCKDHB-202ENST00000356489 KRTAP9-7A8MTY7 169 aa9.46□□□□□ -0.89
BCKDHB-202ENST00000356489 KRTAP10-12P60413 245 aa9.41□□□□□ -0.9
BCKDHB-202ENST00000356489 KRTAP6-3Q3LI67 103 aa9.34□□□□□ -0.91
BCKDHB-202ENST00000356489 KRTAP4-8A0A0G2JLE6 195 aa9.29□□□□□ -0.92
BCKDHB-202ENST00000356489 KRTAP4-8Q9BYQ9 185 aa9.29□□□□□ -0.92
BCKDHB-202ENST00000356489 C10orf95Q9H7T3 257 aa9.29□□□□□ -0.92
BCKDHB-202ENST00000356489 K7ERS5 55 aa9.26□□□□□ -0.93
BCKDHB-202ENST00000356489 CDC42SE1Q9NRR8 79 aa9.22□□□□□ -0.93
BCKDHB-202ENST00000356489 KRTAP5-9P26371 169 aa9.21□□□□□ -0.94
BCKDHB-202ENST00000356489 KRTAP8-1Q8IUC2 63 aa9.21□□□□□ -0.94
BCKDHB-202ENST00000356489 MUC12Q9UKN1 5478 aa9.14□□□□□ -0.95
BCKDHB-202ENST00000356489 TNP1P09430 55 aa9.09□□□□□ -0.95
BCKDHB-202ENST00000356489 SPRR2FQ96RM1 72 aa9.05□□□□□ -0.96
BCKDHB-202ENST00000356489 MDN1Q9NU22 5596 aa8.96□□□□□ -0.97
BCKDHB-202ENST00000356489 NEBP20929 6669 aa8.92□□□□□ -0.98
BCKDHB-202ENST00000356489 KRTAP25-1Q3LHN0 102 aa8.9□□□□□ -0.99
BCKDHB-202ENST00000356489 LCE3AQ5TA76 89 aa8.89□□□□□ -0.99
BCKDHB-202ENST00000356489 KRTAP19-7Q3SYF9 63 aa8.86□□□□□ -0.99
BCKDHB-202ENST00000356489 BRK1Q8WUW1 75 aa8.85□□□□□ -0.99
BCKDHB-202ENST00000356489 ROMO1P60602 79 aa8.8□□□□□ -1
BCKDHB-202ENST00000356489 KRTAP19-5Q3LI72 72 aa8.78□□□□□ -1
BCKDHB-202ENST00000356489 LCE1AQ5T7P2 110 aa8.76□□□□□ -1.01
BCKDHB-202ENST00000356489 SPRR2EP22531 72 aa8.75□□□□□ -1.01
BCKDHB-202ENST00000356489 SPRR2BP35325 72 aa8.75□□□□□ -1.01
BCKDHB-202ENST00000356489 SPRR2AP35326 72 aa8.75□□□□□ -1.01
BCKDHB-202ENST00000356489 MT1EP04732 61 aa8.74□□□□□ -1.01
BCKDHB-202ENST00000356489 KRTAP23-1A1A580 65 aa8.6□□□□□ -1.03
BCKDHB-202ENST00000356489 KRTAP12-3P60328 96 aa8.54□□□□□ -1.04
BCKDHB-202ENST00000356489 KRTAP19-3Q7Z4W3 81 aa8.52□□□□□ -1.05
BCKDHB-202ENST00000356489 LOC100996750A0A140TA64 210 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms