RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 H1FX-AS1Q4G0G2 97 aa11.25□□□□□ -0.61
LIMS2-202ENST00000355119 H0YAA0 97 aa11.21□□□□□ -0.61
LIMS2-202ENST00000355119 RBM12B-AS1Q9P1G2 102 aa11.16□□□□□ -0.62
LIMS2-202ENST00000355119 DMBT1Q9UGM3 2413 aaPredicted RBP11.15□□□□□ -0.62
LIMS2-202ENST00000355119 KIAA1109Q2LD37 5005 aa11.14□□□□□ -0.63
LIMS2-202ENST00000355119 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
LIMS2-202ENST00000355119 S4R3F8 94 aa11.1□□□□□ -0.63
LIMS2-202ENST00000355119 TPRXLQ17RH7 258 aa11.08□□□□□ -0.64
LIMS2-202ENST00000355119 PRAC1Q96KF2 57 aa11.04□□□□□ -0.64
LIMS2-202ENST00000355119 ADM2Q7Z4H4 148 aa11.03□□□□□ -0.64
LIMS2-202ENST00000355119 KRTAP10-6P60371 365 aaPredicted RBP10.96□□□□□ -0.65
LIMS2-202ENST00000355119 BIRC6Q9NR09 4857 aa10.95□□□□□ -0.66
LIMS2-202ENST00000355119 MYCBP2O75592 4640 aa10.93□□□□□ -0.66
LIMS2-202ENST00000355119 KRTAP3-2Q9BYR7 98 aa10.92□□□□□ -0.66
LIMS2-202ENST00000355119 K7ERS5 55 aa10.9□□□□□ -0.66
LIMS2-202ENST00000355119 KRTAP4-5Q9BYR2 181 aa10.85□□□□□ -0.67
LIMS2-202ENST00000355119 CSAG1Q6PB30 78 aa10.79□□□□□ -0.68
LIMS2-202ENST00000355119 KRTAP13-4Q3LI77 160 aa10.77□□□□□ -0.68
LIMS2-202ENST00000355119 P0C880 135 aa10.75□□□□□ -0.69
LIMS2-202ENST00000355119 HERC2O95714 4834 aa10.75□□□□□ -0.69
LIMS2-202ENST00000355119 SEC61BP60468 96 aaKnown RBP10.69□□□□□ -0.7
LIMS2-202ENST00000355119 ABCA13Q86UQ4 5058 aa10.69□□□□□ -0.7
LIMS2-202ENST00000355119 A0A0D9SG42 100 aa10.67□□□□□ -0.7
LIMS2-202ENST00000355119 LRP2P98164 4655 aa10.66□□□□□ -0.7
LIMS2-202ENST00000355119 LINC01554Q52M75 96 aa10.66□□□□□ -0.7
LIMS2-202ENST00000355119 J3QL48 77 aa10.63□□□□□ -0.71
LIMS2-202ENST00000355119 LPAP08519 4548 aa10.59□□□□□ -0.71
LIMS2-202ENST00000355119 KRTAP25-1Q3LHN0 102 aa10.58□□□□□ -0.72
LIMS2-202ENST00000355119 ROMO1P60602 79 aa10.58□□□□□ -0.72
LIMS2-202ENST00000355119 PCLOQ9Y6V0 5065 aa10.56□□□□□ -0.72
LIMS2-202ENST00000355119 M0QZ58 72 aa10.52□□□□□ -0.73
LIMS2-202ENST00000355119 KRTAP12-2P59991 146 aa10.43□□□□□ -0.74
LIMS2-202ENST00000355119 KRTAP4-1Q9BYQ7 146 aa10.42□□□□□ -0.74
LIMS2-202ENST00000355119 KRTAP12-1P59990 96 aa10.41□□□□□ -0.74
LIMS2-202ENST00000355119 SPINT4Q6UDR6 99 aa10.36□□□□□ -0.75
LIMS2-202ENST00000355119 CRIPTQ9P021 101 aa10.36□□□□□ -0.75
LIMS2-202ENST00000355119 MUC17Q685J3 4493 aa10.35□□□□□ -0.75
LIMS2-202ENST00000355119 R4GN34 69 aa10.26□□□□□ -0.77
LIMS2-202ENST00000355119 KRTAP19-2Q3LHN2 52 aa10.25□□□□□ -0.77
LIMS2-202ENST00000355119 HERC1Q15751 4861 aa10.22□□□□□ -0.77
LIMS2-202ENST00000355119 LORP23490 312 aaPredicted RBP10.1□□□□□ -0.79
LIMS2-202ENST00000355119 C10orf95Q9H7T3 257 aa10.07□□□□□ -0.8
LIMS2-202ENST00000355119 HMCN2Q8NDA2 5059 aa9.88□□□□□ -0.83
LIMS2-202ENST00000355119 FLGP20930 4061 aaPredicted RBP9.81□□□□□ -0.84
LIMS2-202ENST00000355119 LCE2CQ5TA81 110 aa9.72□□□□□ -0.85
LIMS2-202ENST00000355119 CAMK2N1Q7Z7J9 78 aa9.72□□□□□ -0.85
LIMS2-202ENST00000355119 UBR4Q5T4S7 5183 aa9.63□□□□□ -0.87
LIMS2-202ENST00000355119 MUC2Q02817 5179 aa9.62□□□□□ -0.87
LIMS2-202ENST00000355119 KRTAP15-1Q3LI76 137 aa9.57□□□□□ -0.88
LIMS2-202ENST00000355119 RNF213Q63HN8 5207 aa9.5□□□□□ -0.89
LIMS2-202ENST00000355119 PP632Q6XCG6 107 aa9.49□□□□□ -0.89
LIMS2-202ENST00000355119 M0R2T5 61 aa9.48□□□□□ -0.89
LIMS2-202ENST00000355119 MT1HP80294 61 aa9.47□□□□□ -0.89
LIMS2-202ENST00000355119 SPRR2GQ9BYE4 73 aa9.46□□□□□ -0.9
LIMS2-202ENST00000355119 KRTAP19-1Q8IUB9 90 aa9.37□□□□□ -0.91
LIMS2-202ENST00000355119 TNP1P09430 55 aa9.36□□□□□ -0.91
LIMS2-202ENST00000355119 PLAC4Q8WY50 150 aa9.35□□□□□ -0.91
LIMS2-202ENST00000355119 H3BS24 57 aa9.33□□□□□ -0.92
LIMS2-202ENST00000355119 MT2AP02795 61 aa9.29□□□□□ -0.92
LIMS2-202ENST00000355119 KRTAP23-1A1A580 65 aa9.27□□□□□ -0.92
LIMS2-202ENST00000355119 MT1FP04733 61 aa9.26□□□□□ -0.93
LIMS2-202ENST00000355119 KRTAP10-10P60014 251 aa9.26□□□□□ -0.93
LIMS2-202ENST00000355119 KRTAP9-8Q9BYQ0 159 aa9.22□□□□□ -0.93
LIMS2-202ENST00000355119 FAT4Q6V0I7 4981 aa9.21□□□□□ -0.93
LIMS2-202ENST00000355119 NDUFAF8A1L188 74 aa9.19□□□□□ -0.94
LIMS2-202ENST00000355119 KRTAP19-8Q3LI54 63 aa9.1□□□□□ -0.95
LIMS2-202ENST00000355119 MT1BP07438 61 aa8.93□□□□□ -0.98
LIMS2-202ENST00000355119 KRTAP9-3Q9BYQ3 159 aa8.87□□□□□ -0.99
LIMS2-202ENST00000355119 LCE3AQ5TA76 89 aa8.83□□□□□ -1
LIMS2-202ENST00000355119 LUZP6Q538Z0 58 aa8.83□□□□□ -1
LIMS2-202ENST00000355119 KRTAP10-5P60370 271 aa8.81□□□□□ -1
LIMS2-202ENST00000355119 MT1XP80297 61 aa8.81□□□□□ -1
LIMS2-202ENST00000355119 SPRR5A0A1B0GTR4 108 aa8.73□□□□□ -1.01
LIMS2-202ENST00000355119 KRTAP8-1Q8IUC2 63 aa8.67□□□□□ -1.02
LIMS2-202ENST00000355119 LCE2AQ5TA79 106 aaPredicted RBP8.66□□□□□ -1.02
LIMS2-202ENST00000355119 PRO2289Q9P1D8 64 aa8.61□□□□□ -1.03
LIMS2-202ENST00000355119 KRTAP10-12P60413 245 aa8.6□□□□□ -1.03
LIMS2-202ENST00000355119 KRTAP10-7P60409 375 aaPredicted RBP8.51□□□□□ -1.05
LIMS2-202ENST00000355119 LCE2BO14633 110 aa8.49□□□□□ -1.05
LIMS2-202ENST00000355119 KRTAP12-3P60328 96 aa8.45□□□□□ -1.06
LIMS2-202ENST00000355119 A0A0A0MQY5 61 aa8.23□□□□□ -1.09
LIMS2-202ENST00000355119 KRTAP19-5Q3LI72 72 aa8.15□□□□□ -1.11
LIMS2-202ENST00000355119 FSIP2Q5CZC0 6907 aa8.09□□□□□ -1.12
LIMS2-202ENST00000355119 USH2AO75445 5202 aa8.02□□□□□ -1.13
LIMS2-202ENST00000355119 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
LIMS2-202ENST00000355119 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
LIMS2-202ENST00000355119 LCE3CQ5T5A8 94 aa7.95□□□□□ -1.14
LIMS2-202ENST00000355119 LCE2DQ5TA82 110 aaPredicted RBP7.9□□□□□ -1.15
LIMS2-202ENST00000355119 KRTAP9-2Q9BYQ4 174 aa7.9□□□□□ -1.15
LIMS2-202ENST00000355119 KRTAP19-7Q3SYF9 63 aa7.84□□□□□ -1.15
LIMS2-202ENST00000355119 KRTAP19-6Q3LI70 58 aa7.78□□□□□ -1.16
LIMS2-202ENST00000355119 SSPOA2VEC9 5147 aa7.77□□□□□ -1.17
LIMS2-202ENST00000355119 KRTAP19-4Q3LI73 84 aa7.76□□□□□ -1.17
LIMS2-202ENST00000355119 KMT2DO14686 5537 aa7.7□□□□□ -1.18
LIMS2-202ENST00000355119 MT1EP04732 61 aa7.66□□□□□ -1.18
LIMS2-202ENST00000355119 MT1LQ93083 61 aa7.62□□□□□ -1.19
LIMS2-202ENST00000355119 KRTAP9-6A8MVA2 160 aa7.56□□□□□ -1.2
LIMS2-202ENST00000355119 INE1O15225 51 aa7.54□□□□□ -1.2
LIMS2-202ENST00000355119 KRTAP4-7Q9BYR0 210 aa7.52□□□□□ -1.2
LIMS2-202ENST00000355119 CRCT1Q9UGL9 99 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms