RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 COX6B2Q6YFQ2 88 aa4.36□□□□□ -1.71
NLRP3-202ENST00000348069 VPS13BQ7Z7G8 4022 aa4.35□□□□□ -1.71
NLRP3-202ENST00000348069 MYCBP2O75592 4640 aa4.34□□□□□ -1.72
NLRP3-202ENST00000348069 KRTAP4-5Q9BYR2 181 aa4.33□□□□□ -1.72
NLRP3-202ENST00000348069 PKD1P98161 4303 aa4.33□□□□□ -1.72
NLRP3-202ENST00000348069 LRP1Q07954 4544 aaKnown RBP4.32□□□□□ -1.72
NLRP3-202ENST00000348069 RYR1P21817 5038 aa4.32□□□□□ -1.72
NLRP3-202ENST00000348069 FAT2Q9NYQ8 4349 aa4.32□□□□□ -1.72
NLRP3-202ENST00000348069 RYR2Q92736 4967 aa4.31□□□□□ -1.72
NLRP3-202ENST00000348069 APOBP04114 4563 aaKnown RBP4.31□□□□□ -1.72
NLRP3-202ENST00000348069 FAT3Q8TDW7 4589 aa4.31□□□□□ -1.72
NLRP3-202ENST00000348069 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
NLRP3-202ENST00000348069 S4R3F8 94 aa4.28□□□□□ -1.72
NLRP3-202ENST00000348069 RPS29P62273 56 aaKnown RBP4.27□□□□□ -1.73
NLRP3-202ENST00000348069 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
NLRP3-202ENST00000348069 KRTAP10-4P60372 401 aaPredicted RBP4.25□□□□□ -1.73
NLRP3-202ENST00000348069 EPPK1P58107 5090 aaKnown RBP4.25□□□□□ -1.73
NLRP3-202ENST00000348069 KRTAP17-1Q9BYP8 105 aa4.24□□□□□ -1.73
NLRP3-202ENST00000348069 KRTAP3-1Q9BYR8 98 aa4.24□□□□□ -1.73
NLRP3-202ENST00000348069 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
NLRP3-202ENST00000348069 KRTAP10-8P60410 259 aa4.22□□□□□ -1.73
NLRP3-202ENST00000348069 TPRXLQ17RH7 258 aa4.18□□□□□ -1.74
NLRP3-202ENST00000348069 XP32Q5T750 250 aa4.17□□□□□ -1.74
NLRP3-202ENST00000348069 MT1HL1P0DM35 61 aa4.15□□□□□ -1.74
NLRP3-202ENST00000348069 R4GN34 69 aa4.12□□□□□ -1.75
NLRP3-202ENST00000348069 PKHD1L1Q86WI1 4243 aa4.12□□□□□ -1.75
NLRP3-202ENST00000348069 HERC2O95714 4834 aa4.12□□□□□ -1.75
NLRP3-202ENST00000348069 HSPG2P98160 4391 aa4.11□□□□□ -1.75
NLRP3-202ENST00000348069 M0QZ58 72 aa4.11□□□□□ -1.75
NLRP3-202ENST00000348069 KRTAP13-4Q3LI77 160 aa4.11□□□□□ -1.75
NLRP3-202ENST00000348069 SEC61BP60468 96 aaKnown RBP4.11□□□□□ -1.75
NLRP3-202ENST00000348069 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.76
NLRP3-202ENST00000348069 LRP2P98164 4655 aa4.07□□□□□ -1.76
NLRP3-202ENST00000348069 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
NLRP3-202ENST00000348069 M0R2T5 61 aa4.06□□□□□ -1.76
NLRP3-202ENST00000348069 CAMK2N1Q7Z7J9 78 aa4.05□□□□□ -1.76
NLRP3-202ENST00000348069 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
NLRP3-202ENST00000348069 KRTAP3-3Q9BYR6 98 aa4□□□□□ -1.77
NLRP3-202ENST00000348069 LPAP08519 4548 aa4□□□□□ -1.77
NLRP3-202ENST00000348069 KRTAP12-1P59990 96 aa4□□□□□ -1.77
NLRP3-202ENST00000348069 KRTAP3-2Q9BYR7 98 aa4□□□□□ -1.77
NLRP3-202ENST00000348069 HERC1Q15751 4861 aa3.99□□□□□ -1.77
NLRP3-202ENST00000348069 MUC2Q02817 5179 aa3.98□□□□□ -1.77
NLRP3-202ENST00000348069 TNXBP22105 4242 aa3.97□□□□□ -1.77
NLRP3-202ENST00000348069 PLAC4Q8WY50 150 aa3.97□□□□□ -1.77
NLRP3-202ENST00000348069 BIRC6Q9NR09 4857 aa3.93□□□□□ -1.78
NLRP3-202ENST00000348069 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
NLRP3-202ENST00000348069 PCLOQ9Y6V0 5065 aa3.91□□□□□ -1.78
NLRP3-202ENST00000348069 KRTAP4-1Q9BYQ7 146 aa3.85□□□□□ -1.79
NLRP3-202ENST00000348069 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
NLRP3-202ENST00000348069 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
NLRP3-202ENST00000348069 FAT4Q6V0I7 4981 aa3.79□□□□□ -1.8
NLRP3-202ENST00000348069 TNP1P09430 55 aa3.76□□□□□ -1.81
NLRP3-202ENST00000348069 KRTAP10-10P60014 251 aa3.72□□□□□ -1.81
NLRP3-202ENST00000348069 LORP23490 312 aaPredicted RBP3.68□□□□□ -1.82
NLRP3-202ENST00000348069 FSIP2Q5CZC0 6907 aa3.66□□□□□ -1.82
NLRP3-202ENST00000348069 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
NLRP3-202ENST00000348069 HMCN2Q8NDA2 5059 aa3.64□□□□□ -1.83
NLRP3-202ENST00000348069 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
NLRP3-202ENST00000348069 LCE2DQ5TA82 110 aaPredicted RBP3.55□□□□□ -1.84
NLRP3-202ENST00000348069 MT1HP80294 61 aa3.52□□□□□ -1.85
NLRP3-202ENST00000348069 KRTAP23-1A1A580 65 aa3.51□□□□□ -1.85
NLRP3-202ENST00000348069 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
NLRP3-202ENST00000348069 LCE2CQ5TA81 110 aa3.46□□□□□ -1.86
NLRP3-202ENST00000348069 INE1O15225 51 aa3.44□□□□□ -1.86
NLRP3-202ENST00000348069 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
NLRP3-202ENST00000348069 MT1FP04733 61 aa3.43□□□□□ -1.86
NLRP3-202ENST00000348069 USH2AO75445 5202 aa3.43□□□□□ -1.86
NLRP3-202ENST00000348069 MT2AP02795 61 aa3.42□□□□□ -1.86
NLRP3-202ENST00000348069 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
NLRP3-202ENST00000348069 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
NLRP3-202ENST00000348069 KRTAP9-8Q9BYQ0 159 aa3.32□□□□□ -1.88
NLRP3-202ENST00000348069 KRTAP19-1Q8IUB9 90 aa3.32□□□□□ -1.88
NLRP3-202ENST00000348069 SPRR2GQ9BYE4 73 aa3.26□□□□□ -1.89
NLRP3-202ENST00000348069 LCE2BO14633 110 aa3.25□□□□□ -1.89
NLRP3-202ENST00000348069 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
NLRP3-202ENST00000348069 KRTAP10-12P60413 245 aa3.24□□□□□ -1.89
NLRP3-202ENST00000348069 KMT2DO14686 5537 aa3.19□□□□□ -1.9
NLRP3-202ENST00000348069 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
NLRP3-202ENST00000348069 MT1BP07438 61 aa3.17□□□□□ -1.9
NLRP3-202ENST00000348069 KRTAP8-1Q8IUC2 63 aa3.16□□□□□ -1.9
NLRP3-202ENST00000348069 LCE2AQ5TA79 106 aaPredicted RBP3.14□□□□□ -1.91
NLRP3-202ENST00000348069 KRTAP10-7P60409 375 aaPredicted RBP3.12□□□□□ -1.91
NLRP3-202ENST00000348069 MT1XP80297 61 aa3.11□□□□□ -1.91
NLRP3-202ENST00000348069 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.91
NLRP3-202ENST00000348069 KRTAP4-8A0A0G2JLE6 195 aa3.09□□□□□ -1.91
NLRP3-202ENST00000348069 KRTAP10-5P60370 271 aa3.09□□□□□ -1.91
NLRP3-202ENST00000348069 KRTAP4-8Q9BYQ9 185 aa3.09□□□□□ -1.91
NLRP3-202ENST00000348069 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
NLRP3-202ENST00000348069 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.93
NLRP3-202ENST00000348069 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
NLRP3-202ENST00000348069 CRCT1Q9UGL9 99 aa3□□□□□ -1.93
NLRP3-202ENST00000348069 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
NLRP3-202ENST00000348069 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
NLRP3-202ENST00000348069 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
NLRP3-202ENST00000348069 FCGBPQ9Y6R7 5405 aaPredicted RBP2.93□□□□□ -1.94
NLRP3-202ENST00000348069 KRTAP9-2Q9BYQ4 174 aa2.92□□□□□ -1.94
NLRP3-202ENST00000348069 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
NLRP3-202ENST00000348069 SPRR2FQ96RM1 72 aa2.91□□□□□ -1.94
NLRP3-202ENST00000348069 SYNE2Q8WXH0 6885 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms