RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 FAT3Q8TDW7 4589 aa12.64□□□□□ -0.39
PTPA-202ENST00000347048 LINC01554Q52M75 96 aa12.61□□□□□ -0.39
PTPA-202ENST00000347048 Q5VSD8 79 aa12.6□□□□□ -0.39
PTPA-202ENST00000347048 RPL37P61927 97 aaKnown RBP12.6□□□□□ -0.39
PTPA-202ENST00000347048 CSAG1Q6PB30 78 aa12.58□□□□□ -0.4
PTPA-202ENST00000347048 TNXBP22105 4242 aa12.55□□□□□ -0.4
PTPA-202ENST00000347048 KRTAP4-5Q9BYR2 181 aa12.52□□□□□ -0.4
PTPA-202ENST00000347048 K7ERS5 55 aa12.47□□□□□ -0.41
PTPA-202ENST00000347048 XP32Q5T750 250 aa12.47□□□□□ -0.41
PTPA-202ENST00000347048 HERC2O95714 4834 aa12.46□□□□□ -0.42
PTPA-202ENST00000347048 KRTAP3-3Q9BYR6 98 aa12.43□□□□□ -0.42
PTPA-202ENST00000347048 LRP1Q07954 4544 aaKnown RBP12.38□□□□□ -0.43
PTPA-202ENST00000347048 S4R3F8 94 aa12.37□□□□□ -0.43
PTPA-202ENST00000347048 KRTAP10-6P60371 365 aaPredicted RBP12.36□□□□□ -0.43
PTPA-202ENST00000347048 KRTAP25-1Q3LHN0 102 aa12.31□□□□□ -0.44
PTPA-202ENST00000347048 ABCA13Q86UQ4 5058 aa12.29□□□□□ -0.44
PTPA-202ENST00000347048 KRTAP3-2Q9BYR7 98 aa12.27□□□□□ -0.44
PTPA-202ENST00000347048 MYCBP2O75592 4640 aa12.25□□□□□ -0.45
PTPA-202ENST00000347048 MT1HL1P0DM35 61 aa12.2□□□□□ -0.46
PTPA-202ENST00000347048 KRTAP13-4Q3LI77 160 aa12.18□□□□□ -0.46
PTPA-202ENST00000347048 ROMO1P60602 79 aa12.15□□□□□ -0.46
PTPA-202ENST00000347048 DMBT1Q9UGM3 2413 aaPredicted RBP12.14□□□□□ -0.47
PTPA-202ENST00000347048 PCLOQ9Y6V0 5065 aa12.07□□□□□ -0.48
PTPA-202ENST00000347048 A0A0D9SG42 100 aa12.06□□□□□ -0.48
PTPA-202ENST00000347048 P0C880 135 aa12.05□□□□□ -0.48
PTPA-202ENST00000347048 TPRXLQ17RH7 258 aa12.05□□□□□ -0.48
PTPA-202ENST00000347048 CRIPTQ9P021 101 aa11.92□□□□□ -0.5
PTPA-202ENST00000347048 J3QL48 77 aa11.9□□□□□ -0.5
PTPA-202ENST00000347048 M0QZ58 72 aa11.84□□□□□ -0.51
PTPA-202ENST00000347048 KRTAP12-2P59991 146 aa11.8□□□□□ -0.52
PTPA-202ENST00000347048 KRTAP12-1P59990 96 aa11.76□□□□□ -0.53
PTPA-202ENST00000347048 LPAP08519 4548 aa11.71□□□□□ -0.53
PTPA-202ENST00000347048 LRP2P98164 4655 aa11.71□□□□□ -0.53
PTPA-202ENST00000347048 SPINT4Q6UDR6 99 aa11.69□□□□□ -0.54
PTPA-202ENST00000347048 HERC1Q15751 4861 aa11.69□□□□□ -0.54
PTPA-202ENST00000347048 SEC61BP60468 96 aaKnown RBP11.61□□□□□ -0.55
PTPA-202ENST00000347048 C10orf95Q9H7T3 257 aa11.56□□□□□ -0.56
PTPA-202ENST00000347048 R4GN34 69 aa11.45□□□□□ -0.58
PTPA-202ENST00000347048 HMCN2Q8NDA2 5059 aa11.41□□□□□ -0.58
PTPA-202ENST00000347048 H3BS24 57 aa11.4□□□□□ -0.58
PTPA-202ENST00000347048 MUC17Q685J3 4493 aa11.38□□□□□ -0.59
PTPA-202ENST00000347048 KRTAP4-1Q9BYQ7 146 aa11.29□□□□□ -0.6
PTPA-202ENST00000347048 KRTAP15-1Q3LI76 137 aa11.22□□□□□ -0.61
PTPA-202ENST00000347048 LORP23490 312 aaPredicted RBP11.19□□□□□ -0.62
PTPA-202ENST00000347048 KRTAP19-2Q3LHN2 52 aa11.18□□□□□ -0.62
PTPA-202ENST00000347048 UBR4Q5T4S7 5183 aa11□□□□□ -0.65
PTPA-202ENST00000347048 CAMK2N1Q7Z7J9 78 aa10.87□□□□□ -0.67
PTPA-202ENST00000347048 MUC2Q02817 5179 aa10.86□□□□□ -0.67
PTPA-202ENST00000347048 NDUFAF8A1L188 74 aa10.86□□□□□ -0.67
PTPA-202ENST00000347048 PP632Q6XCG6 107 aa10.85□□□□□ -0.67
PTPA-202ENST00000347048 RNF213Q63HN8 5207 aa10.79□□□□□ -0.68
PTPA-202ENST00000347048 FLGP20930 4061 aaPredicted RBP10.78□□□□□ -0.68
PTPA-202ENST00000347048 PLAC4Q8WY50 150 aa10.74□□□□□ -0.69
PTPA-202ENST00000347048 KRTAP23-1A1A580 65 aa10.54□□□□□ -0.72
PTPA-202ENST00000347048 TNP1P09430 55 aa10.53□□□□□ -0.72
PTPA-202ENST00000347048 LCE2CQ5TA81 110 aa10.47□□□□□ -0.73
PTPA-202ENST00000347048 FAT4Q6V0I7 4981 aa10.43□□□□□ -0.74
PTPA-202ENST00000347048 SPRR2GQ9BYE4 73 aa10.41□□□□□ -0.74
PTPA-202ENST00000347048 LUZP6Q538Z0 58 aa10.29□□□□□ -0.76
PTPA-202ENST00000347048 KRTAP19-1Q8IUB9 90 aa10.26□□□□□ -0.77
PTPA-202ENST00000347048 M0R2T5 61 aa10.21□□□□□ -0.78
PTPA-202ENST00000347048 MT1HP80294 61 aa10.21□□□□□ -0.78
PTPA-202ENST00000347048 LCE2AQ5TA79 106 aaPredicted RBP10.1□□□□□ -0.79
PTPA-202ENST00000347048 SPRR5A0A1B0GTR4 108 aa10.07□□□□□ -0.8
PTPA-202ENST00000347048 MT2AP02795 61 aa10.05□□□□□ -0.8
PTPA-202ENST00000347048 MT1FP04733 61 aa10.03□□□□□ -0.8
PTPA-202ENST00000347048 KRTAP10-10P60014 251 aa10.03□□□□□ -0.8
PTPA-202ENST00000347048 KRTAP9-8Q9BYQ0 159 aa9.97□□□□□ -0.81
PTPA-202ENST00000347048 KRTAP19-8Q3LI54 63 aa9.95□□□□□ -0.82
PTPA-202ENST00000347048 LCE3AQ5TA76 89 aa9.88□□□□□ -0.83
PTPA-202ENST00000347048 A0A0A0MQY5 61 aa9.79□□□□□ -0.84
PTPA-202ENST00000347048 MT1BP07438 61 aa9.74□□□□□ -0.85
PTPA-202ENST00000347048 KRTAP8-1Q8IUC2 63 aa9.74□□□□□ -0.85
PTPA-202ENST00000347048 KRTAP10-5P60370 271 aa9.69□□□□□ -0.86
PTPA-202ENST00000347048 MT1XP80297 61 aa9.68□□□□□ -0.86
PTPA-202ENST00000347048 KRTAP9-3Q9BYQ3 159 aa9.56□□□□□ -0.88
PTPA-202ENST00000347048 KRTAP10-12P60413 245 aa9.54□□□□□ -0.88
PTPA-202ENST00000347048 KRTAP12-3P60328 96 aa9.45□□□□□ -0.9
PTPA-202ENST00000347048 PRO2289Q9P1D8 64 aa9.43□□□□□ -0.9
PTPA-202ENST00000347048 KRTAP10-7P60409 375 aaPredicted RBP9.36□□□□□ -0.91
PTPA-202ENST00000347048 LCE2BO14633 110 aa9.28□□□□□ -0.92
PTPA-202ENST00000347048 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
PTPA-202ENST00000347048 KRTAP9-2Q9BYQ4 174 aa9.2□□□□□ -0.94
PTPA-202ENST00000347048 FSIP2Q5CZC0 6907 aa9.12□□□□□ -0.95
PTPA-202ENST00000347048 USH2AO75445 5202 aa9.11□□□□□ -0.95
PTPA-202ENST00000347048 KRTAP19-5Q3LI72 72 aa9□□□□□ -0.97
PTPA-202ENST00000347048 INE1O15225 51 aa8.94□□□□□ -0.98
PTPA-202ENST00000347048 LCE3CQ5T5A8 94 aa8.91□□□□□ -0.98
PTPA-202ENST00000347048 SSPOA2VEC9 5147 aa8.91□□□□□ -0.98
PTPA-202ENST00000347048 CRCT1Q9UGL9 99 aa8.79□□□□□ -1
PTPA-202ENST00000347048 KRTAP19-6Q3LI70 58 aa8.73□□□□□ -1.01
PTPA-202ENST00000347048 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.02
PTPA-202ENST00000347048 KRTAP4-8Q9BYQ9 185 aa8.71□□□□□ -1.02
PTPA-202ENST00000347048 KRTAP19-4Q3LI73 84 aa8.66□□□□□ -1.02
PTPA-202ENST00000347048 KRTAP19-7Q3SYF9 63 aa8.62□□□□□ -1.03
PTPA-202ENST00000347048 KRTAP9-6A0A140TA67 174 aa8.61□□□□□ -1.03
PTPA-202ENST00000347048 FCGBPQ9Y6R7 5405 aaPredicted RBP8.59□□□□□ -1.03
PTPA-202ENST00000347048 KMT2DO14686 5537 aa8.52□□□□□ -1.05
PTPA-202ENST00000347048 KRTAP9-6A8MVA2 160 aa8.49□□□□□ -1.05
PTPA-202ENST00000347048 MT1EP04732 61 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms