RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 OCR1Q9BZK8 76 aa7.26□□□□□ -1.25
TSPAN4-201ENST00000346501 NDUFC1O43677 76 aa7.25□□□□□ -1.25
TSPAN4-201ENST00000346501 H3BPC8 53 aa7.24□□□□□ -1.25
TSPAN4-201ENST00000346501 MT-ATP8P03928 68 aa7.24□□□□□ -1.25
TSPAN4-201ENST00000346501 FCGBPQ9Y6R7 5405 aaPredicted RBP7.22□□□□□ -1.25
TSPAN4-201ENST00000346501 IMUPQ9GZP8 106 aa7.21□□□□□ -1.26
TSPAN4-201ENST00000346501 KRTAP19-6Q3LI70 58 aa7.2□□□□□ -1.26
TSPAN4-201ENST00000346501 PCP4P48539 62 aa7.19□□□□□ -1.26
TSPAN4-201ENST00000346501 KLKP1Q107X0 134 aa7.19□□□□□ -1.26
TSPAN4-201ENST00000346501 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
TSPAN4-201ENST00000346501 CRIPTQ9P021 101 aa7.14□□□□□ -1.27
TSPAN4-201ENST00000346501 Q5VV11 94 aa7.13□□□□□ -1.27
TSPAN4-201ENST00000346501 SMIM20Q8N5G0 67 aa7.11□□□□□ -1.27
TSPAN4-201ENST00000346501 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
TSPAN4-201ENST00000346501 H0YAA0 97 aa7.1□□□□□ -1.27
TSPAN4-201ENST00000346501 TRAV7A0A075B6U4 112 aa7.03□□□□□ -1.28
TSPAN4-201ENST00000346501 KRTAP19-8Q3LI54 63 aa7.03□□□□□ -1.28
TSPAN4-201ENST00000346501 ADM2Q7Z4H4 148 aa7.03□□□□□ -1.28
TSPAN4-201ENST00000346501 DMAC1Q96GE9 116 aa7.03□□□□□ -1.28
TSPAN4-201ENST00000346501 SYNE2Q8WXH0 6885 aaKnown RBP7.03□□□□□ -1.28
TSPAN4-201ENST00000346501 MACF1Q9UPN3 7388 aaKnown RBP7.02□□□□□ -1.29
TSPAN4-201ENST00000346501 A6NN06 94 aa7.01□□□□□ -1.29
TSPAN4-201ENST00000346501 C20orf197Q8N268 126 aa7□□□□□ -1.29
TSPAN4-201ENST00000346501 MT1BP07438 61 aa6.99□□□□□ -1.29
TSPAN4-201ENST00000346501 ANAPC13Q9BS18 74 aa6.99□□□□□ -1.29
TSPAN4-201ENST00000346501 ACYP2P14621 99 aa6.97□□□□□ -1.29
TSPAN4-201ENST00000346501 SPTSSBQ8NFR3 76 aa6.93□□□□□ -1.3
TSPAN4-201ENST00000346501 R4GN34 69 aa6.9□□□□□ -1.3
TSPAN4-201ENST00000346501 CHKB-CPT1BH3BT56 60 aa6.88□□□□□ -1.31
TSPAN4-201ENST00000346501 COX7CP15954 63 aa6.86□□□□□ -1.31
TSPAN4-201ENST00000346501 KRTAP10-5P60370 271 aa6.86□□□□□ -1.31
TSPAN4-201ENST00000346501 SERP2Q8N6R1 65 aa6.85□□□□□ -1.31
TSPAN4-201ENST00000346501 SNURFQ9Y675 71 aa6.85□□□□□ -1.31
TSPAN4-201ENST00000346501 CCDC179H3BU77 68 aa6.83□□□□□ -1.32
TSPAN4-201ENST00000346501 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
TSPAN4-201ENST00000346501 M0QZ58 72 aa6.82□□□□□ -1.32
TSPAN4-201ENST00000346501 P0C880 135 aa6.81□□□□□ -1.32
TSPAN4-201ENST00000346501 KRTAP6-3Q3LI67 103 aa6.81□□□□□ -1.32
TSPAN4-201ENST00000346501 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
TSPAN4-201ENST00000346501 SPANXA2-OT1Q8N9U9 137 aa6.78□□□□□ -1.32
TSPAN4-201ENST00000346501 LINC01554Q52M75 96 aa6.73□□□□□ -1.33
TSPAN4-201ENST00000346501 KRTAP3-2Q9BYR7 98 aa6.72□□□□□ -1.33
TSPAN4-201ENST00000346501 TMEM258P61165 79 aa6.65□□□□□ -1.34
TSPAN4-201ENST00000346501 CYSTM1Q9H1C7 97 aa6.63□□□□□ -1.35
TSPAN4-201ENST00000346501 H7BZZ5 65 aa6.59□□□□□ -1.35
TSPAN4-201ENST00000346501 NEBP20929 6669 aa6.58□□□□□ -1.36
TSPAN4-201ENST00000346501 MT1XP80297 61 aa6.58□□□□□ -1.36
TSPAN4-201ENST00000346501 MUC12Q9UKN1 5478 aa6.58□□□□□ -1.36
TSPAN4-201ENST00000346501 SEC61GP60059 68 aa6.57□□□□□ -1.36
TSPAN4-201ENST00000346501 COA5Q86WW8 74 aa6.57□□□□□ -1.36
TSPAN4-201ENST00000346501 ATP5EP56381 51 aaPredicted RBP6.55□□□□□ -1.36
TSPAN4-201ENST00000346501 SERP1Q9Y6X1 66 aa6.53□□□□□ -1.36
TSPAN4-201ENST00000346501 RPS28P62857 69 aaKnown RBP6.5□□□□□ -1.37
TSPAN4-201ENST00000346501 KRTAP5-9P26371 169 aa6.49□□□□□ -1.37
TSPAN4-201ENST00000346501 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
TSPAN4-201ENST00000346501 KRTAP20-1Q3LI63 56 aa6.42□□□□□ -1.38
TSPAN4-201ENST00000346501 KRTAP8-1Q8IUC2 63 aa6.42□□□□□ -1.38
TSPAN4-201ENST00000346501 CAMK2N1Q7Z7J9 78 aa6.4□□□□□ -1.38
TSPAN4-201ENST00000346501 MDN1Q9NU22 5596 aa6.4□□□□□ -1.39
TSPAN4-201ENST00000346501 SPRR2FQ96RM1 72 aa6.39□□□□□ -1.39
TSPAN4-201ENST00000346501 KMT2DO14686 5537 aa6.38□□□□□ -1.39
TSPAN4-201ENST00000346501 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
TSPAN4-201ENST00000346501 A0A1B0GU33 70 aa6.34□□□□□ -1.39
TSPAN4-201ENST00000346501 A0A0D9SG42 100 aa6.3□□□□□ -1.4
TSPAN4-201ENST00000346501 A0A1B0GU69 56 aa6.3□□□□□ -1.4
TSPAN4-201ENST00000346501 SPRR2EP22531 72 aa6.28□□□□□ -1.4
TSPAN4-201ENST00000346501 SPRR2BP35325 72 aa6.28□□□□□ -1.4
TSPAN4-201ENST00000346501 SPRR2AP35326 72 aa6.28□□□□□ -1.4
TSPAN4-201ENST00000346501 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
TSPAN4-201ENST00000346501 SMIM26A0A096LP01 95 aa6.27□□□□□ -1.41
TSPAN4-201ENST00000346501 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
TSPAN4-201ENST00000346501 SPATA8Q6RVD6 105 aa6.26□□□□□ -1.41
TSPAN4-201ENST00000346501 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
TSPAN4-201ENST00000346501 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
TSPAN4-201ENST00000346501 SPINT4Q6UDR6 99 aa6.24□□□□□ -1.41
TSPAN4-201ENST00000346501 KRTAP2-3P0C7H8 128 aa6.21□□□□□ -1.42
TSPAN4-201ENST00000346501 KRTAP2-4Q9BYR9 128 aa6.21□□□□□ -1.42
TSPAN4-201ENST00000346501 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
TSPAN4-201ENST00000346501 LCE1AQ5T7P2 110 aa6.14□□□□□ -1.43
TSPAN4-201ENST00000346501 Q1T7F1 81 aa6.13□□□□□ -1.43
TSPAN4-201ENST00000346501 KRTAP12-1P59990 96 aa6.11□□□□□ -1.43
TSPAN4-201ENST00000346501 V9GYY9 64 aa6.11□□□□□ -1.43
TSPAN4-201ENST00000346501 SPRR2DP22532 72 aa6.07□□□□□ -1.44
TSPAN4-201ENST00000346501 LINC01558Q9Y6Z2 57 aa6.04□□□□□ -1.44
TSPAN4-201ENST00000346501 A8MU10 97 aa6.03□□□□□ -1.44
TSPAN4-201ENST00000346501 KRTAP2-2Q9BYT5 123 aa6□□□□□ -1.45
TSPAN4-201ENST00000346501 KRTAP2-1Q9BYU5 128 aa6□□□□□ -1.45
TSPAN4-201ENST00000346501 UQCR11O14957 56 aa5.95□□□□□ -1.46
TSPAN4-201ENST00000346501 TNP1P09430 55 aa5.91□□□□□ -1.46
TSPAN4-201ENST00000346501 PSPHP1O15172 72 aa5.9□□□□□ -1.46
TSPAN4-201ENST00000346501 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
TSPAN4-201ENST00000346501 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
TSPAN4-201ENST00000346501 MT1EP04732 61 aa5.84□□□□□ -1.47
TSPAN4-201ENST00000346501 PRO0628Q9UI54 55 aa5.83□□□□□ -1.48
TSPAN4-201ENST00000346501 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
TSPAN4-201ENST00000346501 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
TSPAN4-201ENST00000346501 K7ERS5 55 aa5.8□□□□□ -1.48
TSPAN4-201ENST00000346501 MIR22HGQ0VDD5 57 aa5.8□□□□□ -1.48
TSPAN4-201ENST00000346501 KRTAP19-5Q3LI72 72 aa5.79□□□□□ -1.48
TSPAN4-201ENST00000346501 BRK1Q8WUW1 75 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms