RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 LRP2P98164 4655 aa7.3□□□□□ -1.24
CDK5RAP1-202ENST00000346416 HERC2O95714 4834 aa7.3□□□□□ -1.24
CDK5RAP1-202ENST00000346416 LPAP08519 4548 aa7.28□□□□□ -1.24
CDK5RAP1-202ENST00000346416 BIRC6Q9NR09 4857 aa7.27□□□□□ -1.25
CDK5RAP1-202ENST00000346416 J3QL48 77 aa7.27□□□□□ -1.25
CDK5RAP1-202ENST00000346416 UQCR11O14957 56 aa7.26□□□□□ -1.25
CDK5RAP1-202ENST00000346416 A6NN06 94 aa7.25□□□□□ -1.25
CDK5RAP1-202ENST00000346416 SPATA8Q6RVD6 105 aa7.23□□□□□ -1.25
CDK5RAP1-202ENST00000346416 MIR22HGQ0VDD5 57 aa7.21□□□□□ -1.25
CDK5RAP1-202ENST00000346416 KTN1-AS1Q86SY8 53 aa7.21□□□□□ -1.26
CDK5RAP1-202ENST00000346416 KRTAP3-3Q9BYR6 98 aa7.12□□□□□ -1.27
CDK5RAP1-202ENST00000346416 S4R3F8 94 aa7.1□□□□□ -1.27
CDK5RAP1-202ENST00000346416 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
CDK5RAP1-202ENST00000346416 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
CDK5RAP1-202ENST00000346416 RBM12B-AS1Q9P1G2 102 aa7.08□□□□□ -1.28
CDK5RAP1-202ENST00000346416 PCLOQ9Y6V0 5065 aa7.04□□□□□ -1.28
CDK5RAP1-202ENST00000346416 A0A1B0GU33 70 aa7.03□□□□□ -1.28
CDK5RAP1-202ENST00000346416 H0YAA0 97 aa6.99□□□□□ -1.29
CDK5RAP1-202ENST00000346416 MUC17Q685J3 4493 aa6.98□□□□□ -1.29
CDK5RAP1-202ENST00000346416 KRTAP4-1Q9BYQ7 146 aa6.98□□□□□ -1.29
CDK5RAP1-202ENST00000346416 HERC1Q15751 4861 aa6.96□□□□□ -1.29
CDK5RAP1-202ENST00000346416 KRTAP10-6P60371 365 aaPredicted RBP6.95□□□□□ -1.3
CDK5RAP1-202ENST00000346416 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
CDK5RAP1-202ENST00000346416 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
CDK5RAP1-202ENST00000346416 HMCN2Q8NDA2 5059 aa6.87□□□□□ -1.31
CDK5RAP1-202ENST00000346416 P0C880 135 aa6.86□□□□□ -1.31
CDK5RAP1-202ENST00000346416 MUC2Q02817 5179 aa6.86□□□□□ -1.31
CDK5RAP1-202ENST00000346416 ADM2Q7Z4H4 148 aa6.85□□□□□ -1.31
CDK5RAP1-202ENST00000346416 PRAC1Q96KF2 57 aa6.85□□□□□ -1.31
CDK5RAP1-202ENST00000346416 K7ERS5 55 aa6.83□□□□□ -1.32
CDK5RAP1-202ENST00000346416 KRTAP19-2Q3LHN2 52 aa6.82□□□□□ -1.32
CDK5RAP1-202ENST00000346416 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
CDK5RAP1-202ENST00000346416 H3BS24 57 aa6.8□□□□□ -1.32
CDK5RAP1-202ENST00000346416 A0A0D9SG42 100 aa6.72□□□□□ -1.33
CDK5RAP1-202ENST00000346416 FLGP20930 4061 aaPredicted RBP6.69□□□□□ -1.34
CDK5RAP1-202ENST00000346416 M0QZ58 72 aa6.65□□□□□ -1.34
CDK5RAP1-202ENST00000346416 LINC01554Q52M75 96 aa6.64□□□□□ -1.35
CDK5RAP1-202ENST00000346416 UBR4Q5T4S7 5183 aa6.6□□□□□ -1.35
CDK5RAP1-202ENST00000346416 ROMO1P60602 79 aa6.59□□□□□ -1.35
CDK5RAP1-202ENST00000346416 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
CDK5RAP1-202ENST00000346416 R4GN34 69 aa6.58□□□□□ -1.36
CDK5RAP1-202ENST00000346416 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
CDK5RAP1-202ENST00000346416 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
CDK5RAP1-202ENST00000346416 RNF213Q63HN8 5207 aa6.55□□□□□ -1.36
CDK5RAP1-202ENST00000346416 LCE2CQ5TA81 110 aa6.55□□□□□ -1.36
CDK5RAP1-202ENST00000346416 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
CDK5RAP1-202ENST00000346416 SPINT4Q6UDR6 99 aa6.53□□□□□ -1.36
CDK5RAP1-202ENST00000346416 FAT4Q6V0I7 4981 aa6.53□□□□□ -1.36
CDK5RAP1-202ENST00000346416 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
CDK5RAP1-202ENST00000346416 MT1HP80294 61 aa6.4□□□□□ -1.38
CDK5RAP1-202ENST00000346416 M0R2T5 61 aa6.39□□□□□ -1.39
CDK5RAP1-202ENST00000346416 C10orf95Q9H7T3 257 aa6.26□□□□□ -1.41
CDK5RAP1-202ENST00000346416 MT2AP02795 61 aa6.21□□□□□ -1.42
CDK5RAP1-202ENST00000346416 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
CDK5RAP1-202ENST00000346416 SPRR2GQ9BYE4 73 aa6.2□□□□□ -1.42
CDK5RAP1-202ENST00000346416 CAMK2N1Q7Z7J9 78 aa6.2□□□□□ -1.42
CDK5RAP1-202ENST00000346416 MT1FP04733 61 aa6.19□□□□□ -1.42
CDK5RAP1-202ENST00000346416 KRTAP10-10P60014 251 aa6.19□□□□□ -1.42
CDK5RAP1-202ENST00000346416 KRTAP19-1Q8IUB9 90 aa6.19□□□□□ -1.42
CDK5RAP1-202ENST00000346416 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
CDK5RAP1-202ENST00000346416 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
CDK5RAP1-202ENST00000346416 KRTAP19-8Q3LI54 63 aa5.98□□□□□ -1.45
CDK5RAP1-202ENST00000346416 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.45
CDK5RAP1-202ENST00000346416 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
CDK5RAP1-202ENST00000346416 LCE2AQ5TA79 106 aaPredicted RBP5.95□□□□□ -1.46
CDK5RAP1-202ENST00000346416 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
CDK5RAP1-202ENST00000346416 TNP1P09430 55 aa5.92□□□□□ -1.46
CDK5RAP1-202ENST00000346416 MT1BP07438 61 aa5.91□□□□□ -1.46
CDK5RAP1-202ENST00000346416 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
CDK5RAP1-202ENST00000346416 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
CDK5RAP1-202ENST00000346416 MT1XP80297 61 aa5.78□□□□□ -1.48
CDK5RAP1-202ENST00000346416 LCE2BO14633 110 aa5.78□□□□□ -1.48
CDK5RAP1-202ENST00000346416 NDUFAF8A1L188 74 aa5.71□□□□□ -1.5
CDK5RAP1-202ENST00000346416 USH2AO75445 5202 aa5.67□□□□□ -1.5
CDK5RAP1-202ENST00000346416 LCE3AQ5TA76 89 aa5.65□□□□□ -1.5
CDK5RAP1-202ENST00000346416 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
CDK5RAP1-202ENST00000346416 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.52
CDK5RAP1-202ENST00000346416 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
CDK5RAP1-202ENST00000346416 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
CDK5RAP1-202ENST00000346416 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
CDK5RAP1-202ENST00000346416 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
CDK5RAP1-202ENST00000346416 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
CDK5RAP1-202ENST00000346416 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
CDK5RAP1-202ENST00000346416 KMT2DO14686 5537 aa5.38□□□□□ -1.55
CDK5RAP1-202ENST00000346416 FSIP2Q5CZC0 6907 aa5.36□□□□□ -1.55
CDK5RAP1-202ENST00000346416 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
CDK5RAP1-202ENST00000346416 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
CDK5RAP1-202ENST00000346416 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
CDK5RAP1-202ENST00000346416 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
CDK5RAP1-202ENST00000346416 LCE2DQ5TA82 110 aaPredicted RBP5.26□□□□□ -1.57
CDK5RAP1-202ENST00000346416 KRTAP19-7Q3SYF9 63 aa5.17□□□□□ -1.58
CDK5RAP1-202ENST00000346416 FCGBPQ9Y6R7 5405 aaPredicted RBP5.12□□□□□ -1.59
CDK5RAP1-202ENST00000346416 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
CDK5RAP1-202ENST00000346416 MT1EP04732 61 aa5.04□□□□□ -1.6
CDK5RAP1-202ENST00000346416 MT1LQ93083 61 aa4.98□□□□□ -1.61
CDK5RAP1-202ENST00000346416 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
CDK5RAP1-202ENST00000346416 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
CDK5RAP1-202ENST00000346416 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
CDK5RAP1-202ENST00000346416 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
CDK5RAP1-202ENST00000346416 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms