RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 TNXBP22105 4242 aa4.26□□□□□ -1.73
HMGCR-202ENST00000343975 H3BS24 57 aa4.26□□□□□ -1.73
HMGCR-202ENST00000343975 A8MU10 97 aa4.25□□□□□ -1.73
HMGCR-202ENST00000343975 COA5Q86WW8 74 aa4.23□□□□□ -1.73
HMGCR-202ENST00000343975 HRES1P13985 223 aa4.22□□□□□ -1.73
HMGCR-202ENST00000343975 ACYP2P14621 99 aa4.2□□□□□ -1.74
HMGCR-202ENST00000343975 LINC01554Q52M75 96 aa4.2□□□□□ -1.74
HMGCR-202ENST00000343975 HERC1Q15751 4861 aa4.2□□□□□ -1.74
HMGCR-202ENST00000343975 H1FX-AS1Q4G0G2 97 aa4.19□□□□□ -1.74
HMGCR-202ENST00000343975 LINC01558Q9Y6Z2 57 aa4.19□□□□□ -1.74
HMGCR-202ENST00000343975 S4R3F8 94 aa4.16□□□□□ -1.74
HMGCR-202ENST00000343975 CSAG1Q6PB30 78 aa4.15□□□□□ -1.75
HMGCR-202ENST00000343975 LRP2P98164 4655 aa4.14□□□□□ -1.75
HMGCR-202ENST00000343975 HMCN2Q8NDA2 5059 aa4.13□□□□□ -1.75
HMGCR-202ENST00000343975 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
HMGCR-202ENST00000343975 KRTAP4-1Q9BYQ7 146 aa4.1□□□□□ -1.75
HMGCR-202ENST00000343975 DMAC1Q96GE9 116 aa4.09□□□□□ -1.75
HMGCR-202ENST00000343975 LPAP08519 4548 aa4.05□□□□□ -1.76
HMGCR-202ENST00000343975 A0A1B0GU69 56 aa4.05□□□□□ -1.76
HMGCR-202ENST00000343975 UQCR11O14957 56 aa4.03□□□□□ -1.76
HMGCR-202ENST00000343975 ADM2Q7Z4H4 148 aa4.02□□□□□ -1.77
HMGCR-202ENST00000343975 MIR22HGQ0VDD5 57 aa4.02□□□□□ -1.77
HMGCR-202ENST00000343975 SPATA8Q6RVD6 105 aa3.99□□□□□ -1.77
HMGCR-202ENST00000343975 UBR4Q5T4S7 5183 aa3.97□□□□□ -1.77
HMGCR-202ENST00000343975 KRTAP3-1Q9BYR8 98 aa3.97□□□□□ -1.77
HMGCR-202ENST00000343975 MT1HP80294 61 aa3.96□□□□□ -1.78
HMGCR-202ENST00000343975 KRTAP10-10P60014 251 aa3.95□□□□□ -1.78
HMGCR-202ENST00000343975 RNF213Q63HN8 5207 aa3.95□□□□□ -1.78
HMGCR-202ENST00000343975 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
HMGCR-202ENST00000343975 MUC17Q685J3 4493 aa3.94□□□□□ -1.78
HMGCR-202ENST00000343975 R4GN34 69 aa3.91□□□□□ -1.78
HMGCR-202ENST00000343975 LCE2CQ5TA81 110 aa3.91□□□□□ -1.78
HMGCR-202ENST00000343975 ROMO1P60602 79 aa3.89□□□□□ -1.79
HMGCR-202ENST00000343975 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
HMGCR-202ENST00000343975 K7ERS5 55 aa3.87□□□□□ -1.79
HMGCR-202ENST00000343975 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
HMGCR-202ENST00000343975 CRIPTQ9P021 101 aa3.87□□□□□ -1.79
HMGCR-202ENST00000343975 H0YAA0 97 aa3.86□□□□□ -1.79
HMGCR-202ENST00000343975 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
HMGCR-202ENST00000343975 M0QZ58 72 aa3.85□□□□□ -1.79
HMGCR-202ENST00000343975 LCE2AQ5TA79 106 aaPredicted RBP3.84□□□□□ -1.8
HMGCR-202ENST00000343975 FAT4Q6V0I7 4981 aa3.82□□□□□ -1.8
HMGCR-202ENST00000343975 A0A1B0GU33 70 aa3.82□□□□□ -1.8
HMGCR-202ENST00000343975 KRTAP3-3Q9BYR6 98 aa3.82□□□□□ -1.8
HMGCR-202ENST00000343975 LORP23490 312 aaPredicted RBP3.79□□□□□ -1.8
HMGCR-202ENST00000343975 MUC2Q02817 5179 aa3.79□□□□□ -1.8
HMGCR-202ENST00000343975 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
HMGCR-202ENST00000343975 PLAC4Q8WY50 150 aa3.79□□□□□ -1.8
HMGCR-202ENST00000343975 MT2AP02795 61 aa3.78□□□□□ -1.8
HMGCR-202ENST00000343975 P0C880 135 aa3.76□□□□□ -1.81
HMGCR-202ENST00000343975 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
HMGCR-202ENST00000343975 A0A0D9SG42 100 aa3.74□□□□□ -1.81
HMGCR-202ENST00000343975 MT1FP04733 61 aa3.73□□□□□ -1.81
HMGCR-202ENST00000343975 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
HMGCR-202ENST00000343975 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
HMGCR-202ENST00000343975 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
HMGCR-202ENST00000343975 KRTAP3-2Q9BYR7 98 aa3.66□□□□□ -1.82
HMGCR-202ENST00000343975 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
HMGCR-202ENST00000343975 LCE2DQ5TA82 110 aaPredicted RBP3.64□□□□□ -1.83
HMGCR-202ENST00000343975 SPRR2GQ9BYE4 73 aa3.63□□□□□ -1.83
HMGCR-202ENST00000343975 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
HMGCR-202ENST00000343975 KRTAP9-3Q9BYQ3 159 aa3.61□□□□□ -1.83
HMGCR-202ENST00000343975 KRTAP19-1Q8IUB9 90 aa3.57□□□□□ -1.84
HMGCR-202ENST00000343975 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
HMGCR-202ENST00000343975 KRTAP19-8Q3LI54 63 aa3.54□□□□□ -1.84
HMGCR-202ENST00000343975 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
HMGCR-202ENST00000343975 LCE2BO14633 110 aa3.52□□□□□ -1.85
HMGCR-202ENST00000343975 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
HMGCR-202ENST00000343975 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
HMGCR-202ENST00000343975 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
HMGCR-202ENST00000343975 KRTAP12-1P59990 96 aa3.48□□□□□ -1.85
HMGCR-202ENST00000343975 MT1BP07438 61 aa3.46□□□□□ -1.86
HMGCR-202ENST00000343975 C10orf95Q9H7T3 257 aa3.46□□□□□ -1.86
HMGCR-202ENST00000343975 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
HMGCR-202ENST00000343975 TNP1P09430 55 aa3.45□□□□□ -1.86
HMGCR-202ENST00000343975 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
HMGCR-202ENST00000343975 KRTAP19-6Q3LI70 58 aa3.41□□□□□ -1.86
HMGCR-202ENST00000343975 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
HMGCR-202ENST00000343975 USH2AO75445 5202 aa3.32□□□□□ -1.88
HMGCR-202ENST00000343975 MT1XP80297 61 aa3.32□□□□□ -1.88
HMGCR-202ENST00000343975 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
HMGCR-202ENST00000343975 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
HMGCR-202ENST00000343975 PP632Q6XCG6 107 aa3.24□□□□□ -1.89
HMGCR-202ENST00000343975 SSPOA2VEC9 5147 aa3.21□□□□□ -1.9
HMGCR-202ENST00000343975 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
HMGCR-202ENST00000343975 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
HMGCR-202ENST00000343975 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
HMGCR-202ENST00000343975 SPRR2FQ96RM1 72 aa3.16□□□□□ -1.9
HMGCR-202ENST00000343975 KRTAP9-7A8MTY7 169 aa3.15□□□□□ -1.91
HMGCR-202ENST00000343975 KRTAP23-1A1A580 65 aa3.14□□□□□ -1.91
HMGCR-202ENST00000343975 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
HMGCR-202ENST00000343975 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
HMGCR-202ENST00000343975 KRTAP4-8A0A0G2JLE6 195 aa3.1□□□□□ -1.91
HMGCR-202ENST00000343975 KRTAP4-8Q9BYQ9 185 aa3.1□□□□□ -1.91
HMGCR-202ENST00000343975 KRTAP12-3P60328 96 aa3.09□□□□□ -1.92
HMGCR-202ENST00000343975 SPRR2EP22531 72 aa3.05□□□□□ -1.92
HMGCR-202ENST00000343975 SPRR2BP35325 72 aa3.05□□□□□ -1.92
HMGCR-202ENST00000343975 SPRR2AP35326 72 aa3.05□□□□□ -1.92
HMGCR-202ENST00000343975 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
HMGCR-202ENST00000343975 KRTAP19-5Q3LI72 72 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms