RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 Q5VSD8 79 aa5.15□□□□□ -1.58
UBE2D3-203ENST00000343106 KRTAP10-8P60410 259 aa5.13□□□□□ -1.59
UBE2D3-203ENST00000343106 KRTAP3-3Q9BYR6 98 aa5.13□□□□□ -1.59
UBE2D3-203ENST00000343106 KRTAP3-2Q9BYR7 98 aa5.13□□□□□ -1.59
UBE2D3-203ENST00000343106 RYR3Q15413 4870 aa5.13□□□□□ -1.59
UBE2D3-203ENST00000343106 LINC01554Q52M75 96 aa5.13□□□□□ -1.59
UBE2D3-203ENST00000343106 LPAP08519 4548 aa5.11□□□□□ -1.59
UBE2D3-203ENST00000343106 XP32Q5T750 250 aa5.09□□□□□ -1.59
UBE2D3-203ENST00000343106 KRTAP17-1Q9BYP8 105 aa5.09□□□□□ -1.59
UBE2D3-203ENST00000343106 RPL37P61927 97 aaKnown RBP5.09□□□□□ -1.59
UBE2D3-203ENST00000343106 CRIPTQ9P021 101 aa5.09□□□□□ -1.59
UBE2D3-203ENST00000343106 A0A0D9SG42 100 aa5.07□□□□□ -1.6
UBE2D3-203ENST00000343106 RYR1P21817 5038 aa5.06□□□□□ -1.6
UBE2D3-203ENST00000343106 KIAA1109Q2LD37 5005 aa5.05□□□□□ -1.6
UBE2D3-203ENST00000343106 K7ERS5 55 aa5.04□□□□□ -1.6
UBE2D3-203ENST00000343106 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
UBE2D3-203ENST00000343106 S4R3F8 94 aa5.04□□□□□ -1.6
UBE2D3-203ENST00000343106 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
UBE2D3-203ENST00000343106 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
UBE2D3-203ENST00000343106 LRP2P98164 4655 aa5□□□□□ -1.61
UBE2D3-203ENST00000343106 P0C880 135 aa4.99□□□□□ -1.61
UBE2D3-203ENST00000343106 J3QL48 77 aa4.98□□□□□ -1.61
UBE2D3-203ENST00000343106 MT1HL1P0DM35 61 aa4.98□□□□□ -1.61
UBE2D3-203ENST00000343106 EPPK1P58107 5090 aaKnown RBP4.95□□□□□ -1.62
UBE2D3-203ENST00000343106 ABCA13Q86UQ4 5058 aa4.94□□□□□ -1.62
UBE2D3-203ENST00000343106 ROMO1P60602 79 aa4.93□□□□□ -1.62
UBE2D3-203ENST00000343106 SPINT4Q6UDR6 99 aa4.88□□□□□ -1.63
UBE2D3-203ENST00000343106 KRTAP12-2P59991 146 aa4.87□□□□□ -1.63
UBE2D3-203ENST00000343106 C10orf95Q9H7T3 257 aa4.85□□□□□ -1.63
UBE2D3-203ENST00000343106 TPRXLQ17RH7 258 aa4.84□□□□□ -1.64
UBE2D3-203ENST00000343106 KRTAP4-5Q9BYR2 181 aa4.84□□□□□ -1.64
UBE2D3-203ENST00000343106 KRTAP12-1P59990 96 aa4.8□□□□□ -1.64
UBE2D3-203ENST00000343106 MUC2Q02817 5179 aa4.75□□□□□ -1.65
UBE2D3-203ENST00000343106 M0QZ58 72 aa4.74□□□□□ -1.65
UBE2D3-203ENST00000343106 H3BS24 57 aa4.73□□□□□ -1.65
UBE2D3-203ENST00000343106 MUC17Q685J3 4493 aa4.71□□□□□ -1.65
UBE2D3-203ENST00000343106 R4GN34 69 aa4.71□□□□□ -1.65
UBE2D3-203ENST00000343106 KRTAP4-1Q9BYQ7 146 aa4.69□□□□□ -1.66
UBE2D3-203ENST00000343106 LORP23490 312 aaPredicted RBP4.68□□□□□ -1.66
UBE2D3-203ENST00000343106 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
UBE2D3-203ENST00000343106 HERC2O95714 4834 aa4.67□□□□□ -1.66
UBE2D3-203ENST00000343106 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
UBE2D3-203ENST00000343106 KRTAP4-6Q9BYQ5 205 aa4.56□□□□□ -1.68
UBE2D3-203ENST00000343106 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
UBE2D3-203ENST00000343106 HERC1Q15751 4861 aa4.53□□□□□ -1.68
UBE2D3-203ENST00000343106 KRTAP19-2Q3LHN2 52 aa4.53□□□□□ -1.68
UBE2D3-203ENST00000343106 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
UBE2D3-203ENST00000343106 FLGP20930 4061 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-203ENST00000343106 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
UBE2D3-203ENST00000343106 PCLOQ9Y6V0 5065 aa4.49□□□□□ -1.69
UBE2D3-203ENST00000343106 LCE2BO14633 110 aa4.47□□□□□ -1.69
UBE2D3-203ENST00000343106 FAT4Q6V0I7 4981 aa4.46□□□□□ -1.69
UBE2D3-203ENST00000343106 BIRC6Q9NR09 4857 aa4.45□□□□□ -1.7
UBE2D3-203ENST00000343106 HMCN2Q8NDA2 5059 aa4.4□□□□□ -1.71
UBE2D3-203ENST00000343106 PLAC4Q8WY50 150 aa4.39□□□□□ -1.71
UBE2D3-203ENST00000343106 RNF213Q63HN8 5207 aa4.36□□□□□ -1.71
UBE2D3-203ENST00000343106 LCE2CQ5TA81 110 aa4.35□□□□□ -1.71
UBE2D3-203ENST00000343106 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
UBE2D3-203ENST00000343106 UBR4Q5T4S7 5183 aa4.31□□□□□ -1.72
UBE2D3-203ENST00000343106 M0R2T5 61 aa4.29□□□□□ -1.72
UBE2D3-203ENST00000343106 TNP1P09430 55 aa4.27□□□□□ -1.73
UBE2D3-203ENST00000343106 LCE2AQ5TA79 106 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-203ENST00000343106 KRTAP19-1Q8IUB9 90 aa4.19□□□□□ -1.74
UBE2D3-203ENST00000343106 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
UBE2D3-203ENST00000343106 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
UBE2D3-203ENST00000343106 MT1HP80294 61 aa4.17□□□□□ -1.74
UBE2D3-203ENST00000343106 SPRR2GQ9BYE4 73 aa4.17□□□□□ -1.74
UBE2D3-203ENST00000343106 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
UBE2D3-203ENST00000343106 MT1FP04733 61 aa4.13□□□□□ -1.75
UBE2D3-203ENST00000343106 MT2AP02795 61 aa4.11□□□□□ -1.75
UBE2D3-203ENST00000343106 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
UBE2D3-203ENST00000343106 KRTAP9-8Q9BYQ0 159 aa4.07□□□□□ -1.76
UBE2D3-203ENST00000343106 KRTAP4-8Q9BYQ9 185 aa4.05□□□□□ -1.76
UBE2D3-203ENST00000343106 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
UBE2D3-203ENST00000343106 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
UBE2D3-203ENST00000343106 MT1BP07438 61 aa3.97□□□□□ -1.77
UBE2D3-203ENST00000343106 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
UBE2D3-203ENST00000343106 KRTAP19-8Q3LI54 63 aa3.96□□□□□ -1.78
UBE2D3-203ENST00000343106 MT1XP80297 61 aa3.95□□□□□ -1.78
UBE2D3-203ENST00000343106 USH2AO75445 5202 aa3.93□□□□□ -1.78
UBE2D3-203ENST00000343106 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.79
UBE2D3-203ENST00000343106 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
UBE2D3-203ENST00000343106 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
UBE2D3-203ENST00000343106 KRTAP9-3Q9BYQ3 159 aa3.89□□□□□ -1.79
UBE2D3-203ENST00000343106 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
UBE2D3-203ENST00000343106 KRTAP9-6A0A140TA67 174 aa3.87□□□□□ -1.79
UBE2D3-203ENST00000343106 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
UBE2D3-203ENST00000343106 KMT2DO14686 5537 aa3.87□□□□□ -1.79
UBE2D3-203ENST00000343106 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
UBE2D3-203ENST00000343106 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
UBE2D3-203ENST00000343106 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
UBE2D3-203ENST00000343106 PRO2289Q9P1D8 64 aa3.78□□□□□ -1.8
UBE2D3-203ENST00000343106 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
UBE2D3-203ENST00000343106 KRTAP19-5Q3LI72 72 aa3.72□□□□□ -1.81
UBE2D3-203ENST00000343106 KRTAP4-7Q9BYR0 210 aa3.7□□□□□ -1.82
UBE2D3-203ENST00000343106 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
UBE2D3-203ENST00000343106 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
UBE2D3-203ENST00000343106 INE1O15225 51 aa3.63□□□□□ -1.83
UBE2D3-203ENST00000343106 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
UBE2D3-203ENST00000343106 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms