RNA–Protein interactions for RNA: ENST00000343067.8

EPB41-201, Transcript of erythrocyte membrane protein band 4.1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EPB41, Length 5,956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-201ENST00000343067 TPRXLQ17RH7 258 aa4.22□□□□□ -1.73
EPB41-201ENST00000343067 HYDINQ4G0P3 5121 aa4.2□□□□□ -1.74
EPB41-201ENST00000343067 PKD1P98161 4303 aa4.19□□□□□ -1.74
EPB41-201ENST00000343067 FAT2Q9NYQ8 4349 aa4.17□□□□□ -1.74
EPB41-201ENST00000343067 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.74
EPB41-201ENST00000343067 VPS13BQ7Z7G8 4022 aa4.13□□□□□ -1.75
EPB41-201ENST00000343067 KRTAP3-3Q9BYR6 98 aa4.13□□□□□ -1.75
EPB41-201ENST00000343067 KRTAP3-2Q9BYR7 98 aa4.13□□□□□ -1.75
EPB41-201ENST00000343067 KRTAP13-2Q52LG2 175 aa4.12□□□□□ -1.75
EPB41-201ENST00000343067 KRTAP10-2P60368 255 aa4.1□□□□□ -1.75
EPB41-201ENST00000343067 SMR3BP02814 79 aaPredicted RBP4.09□□□□□ -1.75
EPB41-201ENST00000343067 PKHD1P08F94 4074 aa4.08□□□□□ -1.76
EPB41-201ENST00000343067 KRTAP1-4P0C5Y4 121 aa4.08□□□□□ -1.76
EPB41-201ENST00000343067 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
EPB41-201ENST00000343067 SACSQ9NZJ4 4579 aa4.05□□□□□ -1.76
EPB41-201ENST00000343067 KRTAP10-1P60331 282 aa4.05□□□□□ -1.76
EPB41-201ENST00000343067 DYNC1H1Q14204 4646 aaKnown RBP4.01□□□□□ -1.77
EPB41-201ENST00000343067 FAT1Q14517 4588 aa3.99□□□□□ -1.77
EPB41-201ENST00000343067 PKHD1L1Q86WI1 4243 aa3.99□□□□□ -1.77
EPB41-201ENST00000343067 APOBP04114 4563 aaKnown RBP3.97□□□□□ -1.77
EPB41-201ENST00000343067 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
EPB41-201ENST00000343067 Q5VSD8 79 aa3.96□□□□□ -1.78
EPB41-201ENST00000343067 KMT2CQ8NEZ4 4911 aaKnown RBP3.93□□□□□ -1.78
EPB41-201ENST00000343067 RPS29P62273 56 aaKnown RBP3.92□□□□□ -1.78
EPB41-201ENST00000343067 KRTAP10-4P60372 401 aaPredicted RBP3.89□□□□□ -1.79
EPB41-201ENST00000343067 RYR2Q92736 4967 aa3.89□□□□□ -1.79
EPB41-201ENST00000343067 KRTAP3-1Q9BYR8 98 aa3.88□□□□□ -1.79
EPB41-201ENST00000343067 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
EPB41-201ENST00000343067 FAT3Q8TDW7 4589 aa3.86□□□□□ -1.79
EPB41-201ENST00000343067 LRP1Q07954 4544 aaKnown RBP3.84□□□□□ -1.8
EPB41-201ENST00000343067 HSPG2P98160 4391 aa3.82□□□□□ -1.8
EPB41-201ENST00000343067 A0A1B0GVY2 172 aa3.82□□□□□ -1.8
EPB41-201ENST00000343067 TNXBP22105 4242 aa3.82□□□□□ -1.8
EPB41-201ENST00000343067 RYR3Q15413 4870 aa3.81□□□□□ -1.8
EPB41-201ENST00000343067 MYCBP2O75592 4640 aa3.8□□□□□ -1.8
EPB41-201ENST00000343067 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
EPB41-201ENST00000343067 XP32Q5T750 250 aa3.74□□□□□ -1.81
EPB41-201ENST00000343067 RYR1P21817 5038 aa3.74□□□□□ -1.81
EPB41-201ENST00000343067 KRTAP21-3Q3LHN1 58 aa3.73□□□□□ -1.81
EPB41-201ENST00000343067 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
EPB41-201ENST00000343067 KIAA1109Q2LD37 5005 aa3.69□□□□□ -1.82
EPB41-201ENST00000343067 KRTAP17-1Q9BYP8 105 aa3.67□□□□□ -1.82
EPB41-201ENST00000343067 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
EPB41-201ENST00000343067 MT3P25713 68 aa3.65□□□□□ -1.82
EPB41-201ENST00000343067 EPPK1P58107 5090 aaKnown RBP3.65□□□□□ -1.83
EPB41-201ENST00000343067 LPAP08519 4548 aa3.65□□□□□ -1.83
EPB41-201ENST00000343067 LRP2P98164 4655 aa3.64□□□□□ -1.83
EPB41-201ENST00000343067 ABCA13Q86UQ4 5058 aa3.61□□□□□ -1.83
EPB41-201ENST00000343067 MT1HL1P0DM35 61 aa3.58□□□□□ -1.84
EPB41-201ENST00000343067 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
EPB41-201ENST00000343067 MUC17Q685J3 4493 aa3.47□□□□□ -1.85
EPB41-201ENST00000343067 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
EPB41-201ENST00000343067 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
EPB41-201ENST00000343067 KRTAP4-5Q9BYR2 181 aa3.38□□□□□ -1.87
EPB41-201ENST00000343067 MUC2Q02817 5179 aa3.37□□□□□ -1.87
EPB41-201ENST00000343067 HERC2O95714 4834 aa3.37□□□□□ -1.87
EPB41-201ENST00000343067 KRTAP19-2Q3LHN2 52 aa3.37□□□□□ -1.87
EPB41-201ENST00000343067 KRTAP4-1Q9BYQ7 146 aa3.36□□□□□ -1.87
EPB41-201ENST00000343067 LORP23490 312 aaPredicted RBP3.35□□□□□ -1.87
EPB41-201ENST00000343067 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
EPB41-201ENST00000343067 PCLOQ9Y6V0 5065 aa3.31□□□□□ -1.88
EPB41-201ENST00000343067 BIRC6Q9NR09 4857 aa3.3□□□□□ -1.88
EPB41-201ENST00000343067 FLGP20930 4061 aaPredicted RBP3.3□□□□□ -1.88
EPB41-201ENST00000343067 HERC1Q15751 4861 aa3.29□□□□□ -1.88
EPB41-201ENST00000343067 LCE2CQ5TA81 110 aa3.27□□□□□ -1.89
EPB41-201ENST00000343067 HMCN2Q8NDA2 5059 aa3.23□□□□□ -1.89
EPB41-201ENST00000343067 KRTAP10-12P60413 245 aa3.21□□□□□ -1.9
EPB41-201ENST00000343067 FAT4Q6V0I7 4981 aa3.2□□□□□ -1.9
EPB41-201ENST00000343067 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
EPB41-201ENST00000343067 RNF213Q63HN8 5207 aa3.13□□□□□ -1.91
EPB41-201ENST00000343067 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
EPB41-201ENST00000343067 LCE2DQ5TA82 110 aaPredicted RBP3.11□□□□□ -1.91
EPB41-201ENST00000343067 LCE2BO14633 110 aa3.1□□□□□ -1.91
EPB41-201ENST00000343067 KRTAP19-1Q8IUB9 90 aa3.06□□□□□ -1.92
EPB41-201ENST00000343067 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
EPB41-201ENST00000343067 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
EPB41-201ENST00000343067 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
EPB41-201ENST00000343067 MT1HP80294 61 aa2.97□□□□□ -1.93
EPB41-201ENST00000343067 MT1FP04733 61 aa2.96□□□□□ -1.94
EPB41-201ENST00000343067 MT2AP02795 61 aa2.95□□□□□ -1.94
EPB41-201ENST00000343067 KRTAP9-8Q9BYQ0 159 aa2.95□□□□□ -1.94
EPB41-201ENST00000343067 KRTAP19-8Q3LI54 63 aa2.92□□□□□ -1.94
EPB41-201ENST00000343067 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
EPB41-201ENST00000343067 MT1BP07438 61 aa2.89□□□□□ -1.95
EPB41-201ENST00000343067 KRTAP8-1Q8IUC2 63 aa2.89□□□□□ -1.95
EPB41-201ENST00000343067 LCE2AQ5TA79 106 aaPredicted RBP2.88□□□□□ -1.95
EPB41-201ENST00000343067 MT1XP80297 61 aa2.87□□□□□ -1.95
EPB41-201ENST00000343067 KRTAP9-3Q9BYQ3 159 aa2.81□□□□□ -1.96
EPB41-201ENST00000343067 USH2AO75445 5202 aa2.78□□□□□ -1.96
EPB41-201ENST00000343067 PRM1P04553 51 aa2.73□□□□□ -1.97
EPB41-201ENST00000343067 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
EPB41-201ENST00000343067 KMT2DO14686 5537 aa2.72□□□□□ -1.97
EPB41-201ENST00000343067 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
EPB41-201ENST00000343067 LCE3BQ5TA77 95 aa2.68□□□□□ -1.98
EPB41-201ENST00000343067 KRTAP19-5Q3LI72 72 aa2.67□□□□□ -1.98
EPB41-201ENST00000343067 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
EPB41-201ENST00000343067 KRTAP4-8A0A0G2JLE6 195 aa2.6□□□□□ -1.99
EPB41-201ENST00000343067 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
EPB41-201ENST00000343067 KRTAP4-8Q9BYQ9 185 aa2.6□□□□□ -1.99
EPB41-201ENST00000343067 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms