RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 SPINK6Q6UWN8 80 aa9.12□□□□□ -0.95
CDK11B-201ENST00000340677 PKHD1P08F94 4074 aa9.1□□□□□ -0.95
CDK11B-201ENST00000340677 PCLOQ9Y6V0 5065 aa9.08□□□□□ -0.96
CDK11B-201ENST00000340677 KRTAP1-4P0C5Y4 121 aa9.07□□□□□ -0.96
CDK11B-201ENST00000340677 KRTAP10-4P60372 401 aaPredicted RBP9.05□□□□□ -0.96
CDK11B-201ENST00000340677 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.97
CDK11B-201ENST00000340677 SMR3BP02814 79 aaPredicted RBP9.02□□□□□ -0.97
CDK11B-201ENST00000340677 KRTAP13-2Q52LG2 175 aa9.02□□□□□ -0.97
CDK11B-201ENST00000340677 VPS13BQ7Z7G8 4022 aa9.01□□□□□ -0.97
CDK11B-201ENST00000340677 RPL37P61927 97 aaKnown RBP9□□□□□ -0.97
CDK11B-201ENST00000340677 COX6B2Q6YFQ2 88 aa8.97□□□□□ -0.97
CDK11B-201ENST00000340677 KIAA1109Q2LD37 5005 aa8.94□□□□□ -0.98
CDK11B-201ENST00000340677 Q8N1X5 172 aa8.94□□□□□ -0.98
CDK11B-201ENST00000340677 RYR1P21817 5038 aa8.9□□□□□ -0.98
CDK11B-201ENST00000340677 RPS29P62273 56 aaKnown RBP8.9□□□□□ -0.99
CDK11B-201ENST00000340677 PKHD1L1Q86WI1 4243 aa8.89□□□□□ -0.99
CDK11B-201ENST00000340677 Q5VSD8 79 aa8.86□□□□□ -0.99
CDK11B-201ENST00000340677 PRO2289Q9P1D8 64 aa8.85□□□□□ -0.99
CDK11B-201ENST00000340677 PLAC4Q8WY50 150 aa8.83□□□□□ -1
CDK11B-201ENST00000340677 KRTAP4-5Q9BYR2 181 aa8.83□□□□□ -1
CDK11B-201ENST00000340677 DMBT1Q9UGM3 2413 aaPredicted RBP8.81□□□□□ -1
CDK11B-201ENST00000340677 FAT1Q14517 4588 aa8.79□□□□□ -1
CDK11B-201ENST00000340677 HSPG2P98160 4391 aa8.78□□□□□ -1
CDK11B-201ENST00000340677 ABCA13Q86UQ4 5058 aa8.77□□□□□ -1.01
CDK11B-201ENST00000340677 A0A0D9SG42 100 aa8.76□□□□□ -1.01
CDK11B-201ENST00000340677 KRTAP10-8P60410 259 aa8.72□□□□□ -1.01
CDK11B-201ENST00000340677 XP32Q5T750 250 aa8.72□□□□□ -1.01
CDK11B-201ENST00000340677 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
CDK11B-201ENST00000340677 R4GN34 69 aa8.68□□□□□ -1.02
CDK11B-201ENST00000340677 KRTAP13-4Q3LI77 160 aa8.67□□□□□ -1.02
CDK11B-201ENST00000340677 S4R3F8 94 aa8.63□□□□□ -1.03
CDK11B-201ENST00000340677 MT1HL1P0DM35 61 aa8.55□□□□□ -1.04
CDK11B-201ENST00000340677 TNXBP22105 4242 aa8.53□□□□□ -1.04
CDK11B-201ENST00000340677 FAT3Q8TDW7 4589 aa8.52□□□□□ -1.05
CDK11B-201ENST00000340677 KRTAP12-2P59991 146 aa8.51□□□□□ -1.05
CDK11B-201ENST00000340677 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
CDK11B-201ENST00000340677 KRTAP10-6P60371 365 aaPredicted RBP8.47□□□□□ -1.05
CDK11B-201ENST00000340677 LRP1Q07954 4544 aaKnown RBP8.46□□□□□ -1.06
CDK11B-201ENST00000340677 HERC1Q15751 4861 aa8.44□□□□□ -1.06
CDK11B-201ENST00000340677 KRTAP23-1A1A580 65 aa8.38□□□□□ -1.07
CDK11B-201ENST00000340677 C9orf92A6NGG3 77 aa8.35□□□□□ -1.07
CDK11B-201ENST00000340677 KRTAP12-1P59990 96 aa8.31□□□□□ -1.08
CDK11B-201ENST00000340677 MYCBP2O75592 4640 aa8.3□□□□□ -1.08
CDK11B-201ENST00000340677 INE1O15225 51 aa8.25□□□□□ -1.09
CDK11B-201ENST00000340677 HMCN2Q8NDA2 5059 aa8.09□□□□□ -1.11
CDK11B-201ENST00000340677 UBR4Q5T4S7 5183 aa8.03□□□□□ -1.12
CDK11B-201ENST00000340677 KRTAP3-3Q9BYR6 98 aa8.02□□□□□ -1.12
CDK11B-201ENST00000340677 SPRR5A0A1B0GTR4 108 aa7.97□□□□□ -1.13
CDK11B-201ENST00000340677 LRP2P98164 4655 aa7.84□□□□□ -1.15
CDK11B-201ENST00000340677 PP632Q6XCG6 107 aa7.82□□□□□ -1.16
CDK11B-201ENST00000340677 LPAP08519 4548 aa7.82□□□□□ -1.16
CDK11B-201ENST00000340677 MUC17Q685J3 4493 aa7.77□□□□□ -1.17
CDK11B-201ENST00000340677 RNF213Q63HN8 5207 aa7.71□□□□□ -1.17
CDK11B-201ENST00000340677 M0QZ58 72 aa7.71□□□□□ -1.18
CDK11B-201ENST00000340677 KRTAP4-1Q9BYQ7 146 aa7.69□□□□□ -1.18
CDK11B-201ENST00000340677 KRTAP9-2Q9BYQ4 174 aa7.63□□□□□ -1.19
CDK11B-201ENST00000340677 KRTAP19-2Q3LHN2 52 aa7.57□□□□□ -1.2
CDK11B-201ENST00000340677 KRTAP9-6A0A140TA67 174 aa7.55□□□□□ -1.2
CDK11B-201ENST00000340677 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
CDK11B-201ENST00000340677 LCE2CQ5TA81 110 aa7.35□□□□□ -1.23
CDK11B-201ENST00000340677 FAT4Q6V0I7 4981 aa7.32□□□□□ -1.24
CDK11B-201ENST00000340677 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
CDK11B-201ENST00000340677 LCE2DQ5TA82 110 aaPredicted RBP7.26□□□□□ -1.25
CDK11B-201ENST00000340677 LORP23490 312 aaPredicted RBP7.25□□□□□ -1.25
CDK11B-201ENST00000340677 MUC2Q02817 5179 aa7.21□□□□□ -1.26
CDK11B-201ENST00000340677 MT1HP80294 61 aa7.18□□□□□ -1.26
CDK11B-201ENST00000340677 CRCT1Q9UGL9 99 aa7.16□□□□□ -1.26
CDK11B-201ENST00000340677 M0R2T5 61 aa7.06□□□□□ -1.28
CDK11B-201ENST00000340677 TNP1P09430 55 aa6.95□□□□□ -1.3
CDK11B-201ENST00000340677 KRTAP10-10P60014 251 aa6.95□□□□□ -1.3
CDK11B-201ENST00000340677 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
CDK11B-201ENST00000340677 MT2AP02795 61 aa6.92□□□□□ -1.3
CDK11B-201ENST00000340677 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
CDK11B-201ENST00000340677 MT1FP04733 61 aa6.86□□□□□ -1.31
CDK11B-201ENST00000340677 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
CDK11B-201ENST00000340677 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
CDK11B-201ENST00000340677 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.33
CDK11B-201ENST00000340677 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
CDK11B-201ENST00000340677 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
CDK11B-201ENST00000340677 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
CDK11B-201ENST00000340677 MT1BP07438 61 aa6.54□□□□□ -1.36
CDK11B-201ENST00000340677 LCE2BO14633 110 aa6.46□□□□□ -1.38
CDK11B-201ENST00000340677 LCE3AQ5TA76 89 aa6.46□□□□□ -1.38
CDK11B-201ENST00000340677 KRTAP10-12P60413 245 aa6.44□□□□□ -1.38
CDK11B-201ENST00000340677 KRTAP2-2Q9BYT5 123 aa6.41□□□□□ -1.38
CDK11B-201ENST00000340677 MT1XP80297 61 aa6.33□□□□□ -1.4
CDK11B-201ENST00000340677 KRTAP10-5P60370 271 aa6.32□□□□□ -1.4
CDK11B-201ENST00000340677 SSPOA2VEC9 5147 aa6.27□□□□□ -1.41
CDK11B-201ENST00000340677 USH2AO75445 5202 aa6.26□□□□□ -1.41
CDK11B-201ENST00000340677 FCGBPQ9Y6R7 5405 aaPredicted RBP6.25□□□□□ -1.41
CDK11B-201ENST00000340677 KRTAP8-1Q8IUC2 63 aa6.24□□□□□ -1.41
CDK11B-201ENST00000340677 KRTAP6-3Q3LI67 103 aa6.18□□□□□ -1.42
CDK11B-201ENST00000340677 KRTAP19-6Q3LI70 58 aa6.16□□□□□ -1.42
CDK11B-201ENST00000340677 LCE1AQ5T7P2 110 aa6.1□□□□□ -1.43
CDK11B-201ENST00000340677 KRTAP2-3P0C7H8 128 aa6.09□□□□□ -1.43
CDK11B-201ENST00000340677 KRTAP2-4Q9BYR9 128 aa6.09□□□□□ -1.43
CDK11B-201ENST00000340677 KRTAP2-1Q9BYU5 128 aa6.09□□□□□ -1.43
CDK11B-201ENST00000340677 MACF1Q9UPN3 7388 aaKnown RBP6.07□□□□□ -1.44
CDK11B-201ENST00000340677 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
CDK11B-201ENST00000340677 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms