RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
TRAF3IP2-201ENST00000340026 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
TRAF3IP2-201ENST00000340026 XP32Q5T750 250 aa5.61□□□□□ -1.51
TRAF3IP2-201ENST00000340026 SEC61BP60468 96 aaKnown RBP5.6□□□□□ -1.51
TRAF3IP2-201ENST00000340026 KRTAP17-1Q9BYP8 105 aa5.59□□□□□ -1.52
TRAF3IP2-201ENST00000340026 RBM12B-AS1Q9P1G2 102 aa5.57□□□□□ -1.52
TRAF3IP2-201ENST00000340026 KIAA1109Q2LD37 5005 aa5.54□□□□□ -1.52
TRAF3IP2-201ENST00000340026 TPRXLQ17RH7 258 aa5.54□□□□□ -1.52
TRAF3IP2-201ENST00000340026 MYCBP2O75592 4640 aa5.5□□□□□ -1.53
TRAF3IP2-201ENST00000340026 H1FX-AS1Q4G0G2 97 aa5.49□□□□□ -1.53
TRAF3IP2-201ENST00000340026 A0A1B0GU33 70 aa5.48□□□□□ -1.53
TRAF3IP2-201ENST00000340026 DMBT1Q9UGM3 2413 aaPredicted RBP5.48□□□□□ -1.53
TRAF3IP2-201ENST00000340026 EPPK1P58107 5090 aaKnown RBP5.47□□□□□ -1.53
TRAF3IP2-201ENST00000340026 H0YAA0 97 aa5.47□□□□□ -1.53
TRAF3IP2-201ENST00000340026 S4R3F8 94 aa5.42□□□□□ -1.54
TRAF3IP2-201ENST00000340026 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
TRAF3IP2-201ENST00000340026 LCE2CQ5TA81 110 aa5.39□□□□□ -1.55
TRAF3IP2-201ENST00000340026 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
TRAF3IP2-201ENST00000340026 LRP2P98164 4655 aa5.35□□□□□ -1.55
TRAF3IP2-201ENST00000340026 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.55
TRAF3IP2-201ENST00000340026 KRTAP4-5Q9BYR2 181 aa5.31□□□□□ -1.56
TRAF3IP2-201ENST00000340026 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
TRAF3IP2-201ENST00000340026 LPAP08519 4548 aa5.3□□□□□ -1.56
TRAF3IP2-201ENST00000340026 LCE2BO14633 110 aa5.3□□□□□ -1.56
TRAF3IP2-201ENST00000340026 K7ERS5 55 aa5.29□□□□□ -1.56
TRAF3IP2-201ENST00000340026 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
TRAF3IP2-201ENST00000340026 CSAG1Q6PB30 78 aa5.27□□□□□ -1.57
TRAF3IP2-201ENST00000340026 HERC2O95714 4834 aa5.26□□□□□ -1.57
TRAF3IP2-201ENST00000340026 ADM2Q7Z4H4 148 aa5.25□□□□□ -1.57
TRAF3IP2-201ENST00000340026 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
TRAF3IP2-201ENST00000340026 KRTAP13-4Q3LI77 160 aa5.24□□□□□ -1.57
TRAF3IP2-201ENST00000340026 BIRC6Q9NR09 4857 aa5.23□□□□□ -1.57
TRAF3IP2-201ENST00000340026 P0C880 135 aa5.22□□□□□ -1.57
TRAF3IP2-201ENST00000340026 M0QZ58 72 aa5.21□□□□□ -1.58
TRAF3IP2-201ENST00000340026 LINC01554Q52M75 96 aa5.21□□□□□ -1.58
TRAF3IP2-201ENST00000340026 ROMO1P60602 79 aa5.15□□□□□ -1.58
TRAF3IP2-201ENST00000340026 KRTAP19-2Q3LHN2 52 aa5.14□□□□□ -1.59
TRAF3IP2-201ENST00000340026 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
TRAF3IP2-201ENST00000340026 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
TRAF3IP2-201ENST00000340026 KRTAP12-1P59990 96 aa5.1□□□□□ -1.59
TRAF3IP2-201ENST00000340026 A0A0D9SG42 100 aa5.08□□□□□ -1.6
TRAF3IP2-201ENST00000340026 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
TRAF3IP2-201ENST00000340026 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
TRAF3IP2-201ENST00000340026 R4GN34 69 aa4.99□□□□□ -1.61
TRAF3IP2-201ENST00000340026 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
TRAF3IP2-201ENST00000340026 HERC1Q15751 4861 aa4.98□□□□□ -1.61
TRAF3IP2-201ENST00000340026 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
TRAF3IP2-201ENST00000340026 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
TRAF3IP2-201ENST00000340026 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.62
TRAF3IP2-201ENST00000340026 CRIPTQ9P021 101 aa4.94□□□□□ -1.62
TRAF3IP2-201ENST00000340026 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
TRAF3IP2-201ENST00000340026 MUC2Q02817 5179 aa4.81□□□□□ -1.64
TRAF3IP2-201ENST00000340026 C10orf95Q9H7T3 257 aa4.8□□□□□ -1.64
TRAF3IP2-201ENST00000340026 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
TRAF3IP2-201ENST00000340026 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
TRAF3IP2-201ENST00000340026 MT1HP80294 61 aa4.7□□□□□ -1.66
TRAF3IP2-201ENST00000340026 CAMK2N1Q7Z7J9 78 aa4.69□□□□□ -1.66
TRAF3IP2-201ENST00000340026 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
TRAF3IP2-201ENST00000340026 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
TRAF3IP2-201ENST00000340026 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.67
TRAF3IP2-201ENST00000340026 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
TRAF3IP2-201ENST00000340026 UBR4Q5T4S7 5183 aa4.6□□□□□ -1.67
TRAF3IP2-201ENST00000340026 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
TRAF3IP2-201ENST00000340026 MT2AP02795 61 aa4.59□□□□□ -1.67
TRAF3IP2-201ENST00000340026 TNP1P09430 55 aa4.58□□□□□ -1.68
TRAF3IP2-201ENST00000340026 NDUFAF8A1L188 74 aa4.58□□□□□ -1.68
TRAF3IP2-201ENST00000340026 M0R2T5 61 aa4.57□□□□□ -1.68
TRAF3IP2-201ENST00000340026 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
TRAF3IP2-201ENST00000340026 PLAC4Q8WY50 150 aa4.56□□□□□ -1.68
TRAF3IP2-201ENST00000340026 MT1FP04733 61 aa4.56□□□□□ -1.68
TRAF3IP2-201ENST00000340026 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
TRAF3IP2-201ENST00000340026 MT1BP07438 61 aa4.42□□□□□ -1.7
TRAF3IP2-201ENST00000340026 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
TRAF3IP2-201ENST00000340026 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
TRAF3IP2-201ENST00000340026 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
TRAF3IP2-201ENST00000340026 MT1XP80297 61 aa4.35□□□□□ -1.71
TRAF3IP2-201ENST00000340026 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
TRAF3IP2-201ENST00000340026 LCE3AQ5TA76 89 aa4.3□□□□□ -1.72
TRAF3IP2-201ENST00000340026 PRO2289Q9P1D8 64 aa4.27□□□□□ -1.73
TRAF3IP2-201ENST00000340026 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
TRAF3IP2-201ENST00000340026 KRTAP10-7P60409 375 aaPredicted RBP4.16□□□□□ -1.74
TRAF3IP2-201ENST00000340026 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
TRAF3IP2-201ENST00000340026 USH2AO75445 5202 aa4.02□□□□□ -1.77
TRAF3IP2-201ENST00000340026 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
TRAF3IP2-201ENST00000340026 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
TRAF3IP2-201ENST00000340026 KRTAP19-6Q3LI70 58 aa3.93□□□□□ -1.78
TRAF3IP2-201ENST00000340026 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
TRAF3IP2-201ENST00000340026 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
TRAF3IP2-201ENST00000340026 FSIP2Q5CZC0 6907 aa3.91□□□□□ -1.78
TRAF3IP2-201ENST00000340026 KRTAP19-7Q3SYF9 63 aa3.9□□□□□ -1.79
TRAF3IP2-201ENST00000340026 KRTAP4-8A0A0G2JLE6 195 aa3.87□□□□□ -1.79
TRAF3IP2-201ENST00000340026 KRTAP4-8Q9BYQ9 185 aa3.87□□□□□ -1.79
TRAF3IP2-201ENST00000340026 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
TRAF3IP2-201ENST00000340026 MT1EP04732 61 aa3.8□□□□□ -1.8
TRAF3IP2-201ENST00000340026 KMT2DO14686 5537 aa3.79□□□□□ -1.8
TRAF3IP2-201ENST00000340026 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
TRAF3IP2-201ENST00000340026 KRTAP9-2Q9BYQ4 174 aa3.79□□□□□ -1.8
TRAF3IP2-201ENST00000340026 MT1LQ93083 61 aa3.77□□□□□ -1.81
TRAF3IP2-201ENST00000340026 INE1O15225 51 aa3.71□□□□□ -1.82
TRAF3IP2-201ENST00000340026 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms