RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 COA5Q86WW8 74 aa7.11□□□□□ -1.27
NIPAL3-202ENST00000339255 RPS28P62857 69 aaKnown RBP7.1□□□□□ -1.27
NIPAL3-202ENST00000339255 MT1HP80294 61 aa7.09□□□□□ -1.27
NIPAL3-202ENST00000339255 FLGP20930 4061 aaPredicted RBP7.08□□□□□ -1.28
NIPAL3-202ENST00000339255 SPTSSBQ8NFR3 76 aa7.08□□□□□ -1.28
NIPAL3-202ENST00000339255 CSAG1Q6PB30 78 aa7.06□□□□□ -1.28
NIPAL3-202ENST00000339255 SERP1Q9Y6X1 66 aa7.05□□□□□ -1.28
NIPAL3-202ENST00000339255 KRTAP3-3Q9BYR6 98 aa7.04□□□□□ -1.28
NIPAL3-202ENST00000339255 M0R2T5 61 aa7.03□□□□□ -1.28
NIPAL3-202ENST00000339255 FAT4Q6V0I7 4981 aa7.03□□□□□ -1.28
NIPAL3-202ENST00000339255 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
NIPAL3-202ENST00000339255 H0YAA0 97 aa6.9□□□□□ -1.31
NIPAL3-202ENST00000339255 KRTAP10-6P60371 365 aaPredicted RBP6.87□□□□□ -1.31
NIPAL3-202ENST00000339255 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.32
NIPAL3-202ENST00000339255 SMIM26A0A096LP01 95 aa6.83□□□□□ -1.32
NIPAL3-202ENST00000339255 SEC61GP60059 68 aa6.81□□□□□ -1.32
NIPAL3-202ENST00000339255 ADM2Q7Z4H4 148 aa6.8□□□□□ -1.32
NIPAL3-202ENST00000339255 KRTAP9-8Q9BYQ0 159 aa6.79□□□□□ -1.32
NIPAL3-202ENST00000339255 V9GYY9 64 aa6.79□□□□□ -1.32
NIPAL3-202ENST00000339255 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.32
NIPAL3-202ENST00000339255 A0A1B0GU69 56 aa6.76□□□□□ -1.33
NIPAL3-202ENST00000339255 MT2AP02795 61 aa6.76□□□□□ -1.33
NIPAL3-202ENST00000339255 Q1T7F1 81 aa6.75□□□□□ -1.33
NIPAL3-202ENST00000339255 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
NIPAL3-202ENST00000339255 KRTAP3-2Q9BYR7 98 aa6.74□□□□□ -1.33
NIPAL3-202ENST00000339255 PRO0628Q9UI54 55 aa6.71□□□□□ -1.33
NIPAL3-202ENST00000339255 P0C880 135 aa6.71□□□□□ -1.34
NIPAL3-202ENST00000339255 KRTAP10-10P60014 251 aa6.71□□□□□ -1.34
NIPAL3-202ENST00000339255 MT1FP04733 61 aa6.7□□□□□ -1.34
NIPAL3-202ENST00000339255 CRIPTQ9P021 101 aa6.69□□□□□ -1.34
NIPAL3-202ENST00000339255 A0A1B0GU33 70 aa6.61□□□□□ -1.35
NIPAL3-202ENST00000339255 R4GN34 69 aa6.61□□□□□ -1.35
NIPAL3-202ENST00000339255 M0QZ58 72 aa6.61□□□□□ -1.35
NIPAL3-202ENST00000339255 PSPHP1O15172 72 aa6.6□□□□□ -1.35
NIPAL3-202ENST00000339255 SPRR2GQ9BYE4 73 aa6.56□□□□□ -1.36
NIPAL3-202ENST00000339255 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
NIPAL3-202ENST00000339255 Q5VV11 94 aa6.55□□□□□ -1.36
NIPAL3-202ENST00000339255 UQCR11O14957 56 aa6.52□□□□□ -1.37
NIPAL3-202ENST00000339255 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
NIPAL3-202ENST00000339255 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
NIPAL3-202ENST00000339255 SPATA8Q6RVD6 105 aa6.46□□□□□ -1.37
NIPAL3-202ENST00000339255 A6NED7 52 aa6.44□□□□□ -1.38
NIPAL3-202ENST00000339255 LCE2DQ5TA82 110 aaPredicted RBP6.44□□□□□ -1.38
NIPAL3-202ENST00000339255 LINC01554Q52M75 96 aa6.43□□□□□ -1.38
NIPAL3-202ENST00000339255 BRK1Q8WUW1 75 aa6.43□□□□□ -1.38
NIPAL3-202ENST00000339255 MIR22HGQ0VDD5 57 aa6.41□□□□□ -1.38
NIPAL3-202ENST00000339255 KRTAP19-8Q3LI54 63 aa6.4□□□□□ -1.38
NIPAL3-202ENST00000339255 A6NN06 94 aa6.39□□□□□ -1.39
NIPAL3-202ENST00000339255 LCE2BO14633 110 aa6.39□□□□□ -1.39
NIPAL3-202ENST00000339255 A0A0D9SG42 100 aa6.36□□□□□ -1.39
NIPAL3-202ENST00000339255 A8MU10 97 aa6.33□□□□□ -1.4
NIPAL3-202ENST00000339255 PLAC4Q8WY50 150 aa6.3□□□□□ -1.4
NIPAL3-202ENST00000339255 MT1BP07438 61 aa6.3□□□□□ -1.4
NIPAL3-202ENST00000339255 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
NIPAL3-202ENST00000339255 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
NIPAL3-202ENST00000339255 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
NIPAL3-202ENST00000339255 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
NIPAL3-202ENST00000339255 SPINT4Q6UDR6 99 aa6.23□□□□□ -1.41
NIPAL3-202ENST00000339255 K7ERS5 55 aa6.23□□□□□ -1.41
NIPAL3-202ENST00000339255 KRTAP12-2P59991 146 aa6.21□□□□□ -1.42
NIPAL3-202ENST00000339255 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
NIPAL3-202ENST00000339255 USH2AO75445 5202 aa6.16□□□□□ -1.42
NIPAL3-202ENST00000339255 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
NIPAL3-202ENST00000339255 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
NIPAL3-202ENST00000339255 KRTAP19-6Q3LI70 58 aa6.1□□□□□ -1.43
NIPAL3-202ENST00000339255 KRTAP10-5P60370 271 aa6.06□□□□□ -1.44
NIPAL3-202ENST00000339255 MT1XP80297 61 aa6.06□□□□□ -1.44
NIPAL3-202ENST00000339255 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
NIPAL3-202ENST00000339255 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
NIPAL3-202ENST00000339255 SSPOA2VEC9 5147 aa6□□□□□ -1.45
NIPAL3-202ENST00000339255 C10orf95Q9H7T3 257 aa5.91□□□□□ -1.46
NIPAL3-202ENST00000339255 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
NIPAL3-202ENST00000339255 ROMO1P60602 79 aa5.87□□□□□ -1.47
NIPAL3-202ENST00000339255 TNP1P09430 55 aa5.84□□□□□ -1.47
NIPAL3-202ENST00000339255 FCGBPQ9Y6R7 5405 aaPredicted RBP5.83□□□□□ -1.48
NIPAL3-202ENST00000339255 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
NIPAL3-202ENST00000339255 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
NIPAL3-202ENST00000339255 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
NIPAL3-202ENST00000339255 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
NIPAL3-202ENST00000339255 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
NIPAL3-202ENST00000339255 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.52
NIPAL3-202ENST00000339255 PP632Q6XCG6 107 aa5.59□□□□□ -1.52
NIPAL3-202ENST00000339255 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
NIPAL3-202ENST00000339255 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
NIPAL3-202ENST00000339255 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
NIPAL3-202ENST00000339255 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
NIPAL3-202ENST00000339255 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
NIPAL3-202ENST00000339255 KMT2DO14686 5537 aa5.5□□□□□ -1.53
NIPAL3-202ENST00000339255 H3BS24 57 aa5.46□□□□□ -1.54
NIPAL3-202ENST00000339255 KRTAP5-9P26371 169 aa5.42□□□□□ -1.54
NIPAL3-202ENST00000339255 KRTAP6-3Q3LI67 103 aa5.41□□□□□ -1.54
NIPAL3-202ENST00000339255 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
NIPAL3-202ENST00000339255 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.55
NIPAL3-202ENST00000339255 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
NIPAL3-202ENST00000339255 SPRR2FQ96RM1 72 aa5.38□□□□□ -1.55
NIPAL3-202ENST00000339255 KRTAP9-7A8MTY7 169 aa5.35□□□□□ -1.55
NIPAL3-202ENST00000339255 MT1EP04732 61 aa5.33□□□□□ -1.56
NIPAL3-202ENST00000339255 SYNE2Q8WXH0 6885 aaKnown RBP5.31□□□□□ -1.56
NIPAL3-202ENST00000339255 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
NIPAL3-202ENST00000339255 MT1LQ93083 61 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms