RNA–Protein interactions for RNA: ENST00000339140.4

FOXR2-201, Transcript of forkhead box R2, humanhuman

APPRIS P1 BASIC

Gene FOXR2, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2-201ENST00000339140 C20orf166-AS1Q96NR2 134 aa4.89□□□□□ -1.63
FOXR2-201ENST00000339140 APOBP04114 4563 aaKnown RBP4.87□□□□□ -1.63
FOXR2-201ENST00000339140 KRTAP3-1Q9BYR8 98 aa4.85□□□□□ -1.63
FOXR2-201ENST00000339140 EPPK1P58107 5090 aaKnown RBP4.84□□□□□ -1.63
FOXR2-201ENST00000339140 COX6B2Q6YFQ2 88 aa4.84□□□□□ -1.63
FOXR2-201ENST00000339140 VPS13BQ7Z7G8 4022 aa4.82□□□□□ -1.64
FOXR2-201ENST00000339140 RPL37P61927 97 aaKnown RBP4.8□□□□□ -1.64
FOXR2-201ENST00000339140 C9orf92A6NGG3 77 aa4.8□□□□□ -1.64
FOXR2-201ENST00000339140 FAT1Q14517 4588 aa4.77□□□□□ -1.65
FOXR2-201ENST00000339140 SMR3BP02814 79 aaPredicted RBP4.76□□□□□ -1.65
FOXR2-201ENST00000339140 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
FOXR2-201ENST00000339140 FLG2Q5D862 2391 aaPredicted RBP4.76□□□□□ -1.65
FOXR2-201ENST00000339140 CRIPTQ9P021 101 aa4.76□□□□□ -1.65
FOXR2-201ENST00000339140 HSPG2P98160 4391 aa4.75□□□□□ -1.65
FOXR2-201ENST00000339140 HERC2O95714 4834 aa4.75□□□□□ -1.65
FOXR2-201ENST00000339140 P0C880 135 aa4.74□□□□□ -1.65
FOXR2-201ENST00000339140 KRTAP10-4P60372 401 aaPredicted RBP4.74□□□□□ -1.65
FOXR2-201ENST00000339140 A0A0A0MQY5 61 aa4.73□□□□□ -1.65
FOXR2-201ENST00000339140 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
FOXR2-201ENST00000339140 RYR1P21817 5038 aa4.72□□□□□ -1.65
FOXR2-201ENST00000339140 PCLOQ9Y6V0 5065 aa4.7□□□□□ -1.66
FOXR2-201ENST00000339140 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
FOXR2-201ENST00000339140 TPRXLQ17RH7 258 aa4.67□□□□□ -1.66
FOXR2-201ENST00000339140 Q5VSD8 79 aa4.67□□□□□ -1.66
FOXR2-201ENST00000339140 A0A0D9SG42 100 aa4.66□□□□□ -1.66
FOXR2-201ENST00000339140 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
FOXR2-201ENST00000339140 KIAA1109Q2LD37 5005 aa4.64□□□□□ -1.67
FOXR2-201ENST00000339140 S4R3F8 94 aa4.64□□□□□ -1.67
FOXR2-201ENST00000339140 FAT3Q8TDW7 4589 aa4.61□□□□□ -1.67
FOXR2-201ENST00000339140 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
FOXR2-201ENST00000339140 TNXBP22105 4242 aa4.58□□□□□ -1.68
FOXR2-201ENST00000339140 DMBT1Q9UGM3 2413 aaPredicted RBP4.58□□□□□ -1.68
FOXR2-201ENST00000339140 C10orf95Q9H7T3 257 aa4.58□□□□□ -1.68
FOXR2-201ENST00000339140 LRP1Q07954 4544 aaKnown RBP4.57□□□□□ -1.68
FOXR2-201ENST00000339140 KRTAP10-8P60410 259 aa4.57□□□□□ -1.68
FOXR2-201ENST00000339140 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
FOXR2-201ENST00000339140 XP32Q5T750 250 aa4.56□□□□□ -1.68
FOXR2-201ENST00000339140 KRTAP12-2P59991 146 aa4.54□□□□□ -1.68
FOXR2-201ENST00000339140 M0QZ58 72 aa4.52□□□□□ -1.69
FOXR2-201ENST00000339140 KRTAP12-1P59990 96 aa4.52□□□□□ -1.69
FOXR2-201ENST00000339140 KRTAP4-5Q9BYR2 181 aa4.52□□□□□ -1.69
FOXR2-201ENST00000339140 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
FOXR2-201ENST00000339140 MT1HL1P0DM35 61 aa4.5□□□□□ -1.69
FOXR2-201ENST00000339140 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
FOXR2-201ENST00000339140 ABCA13Q86UQ4 5058 aa4.44□□□□□ -1.7
FOXR2-201ENST00000339140 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
FOXR2-201ENST00000339140 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.36□□□□□ -1.71
FOXR2-201ENST00000339140 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
FOXR2-201ENST00000339140 PLAC4Q8WY50 150 aa4.33□□□□□ -1.72
FOXR2-201ENST00000339140 R4GN34 69 aa4.33□□□□□ -1.72
FOXR2-201ENST00000339140 HERC1Q15751 4861 aa4.3□□□□□ -1.72
FOXR2-201ENST00000339140 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
FOXR2-201ENST00000339140 PP632Q6XCG6 107 aa4.28□□□□□ -1.72
FOXR2-201ENST00000339140 UBR4Q5T4S7 5183 aa4.27□□□□□ -1.73
FOXR2-201ENST00000339140 SEC61BP60468 96 aaKnown RBP4.26□□□□□ -1.73
FOXR2-201ENST00000339140 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
FOXR2-201ENST00000339140 KRTAP4-8A0A0G2JLE6 195 aa4.24□□□□□ -1.73
FOXR2-201ENST00000339140 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
FOXR2-201ENST00000339140 LPAP08519 4548 aa4.23□□□□□ -1.73
FOXR2-201ENST00000339140 LRP2P98164 4655 aa4.21□□□□□ -1.74
FOXR2-201ENST00000339140 MUC17Q685J3 4493 aa4.2□□□□□ -1.74
FOXR2-201ENST00000339140 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
FOXR2-201ENST00000339140 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
FOXR2-201ENST00000339140 HMCN2Q8NDA2 5059 aa4.15□□□□□ -1.74
FOXR2-201ENST00000339140 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.74
FOXR2-201ENST00000339140 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.74
FOXR2-201ENST00000339140 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
FOXR2-201ENST00000339140 CAMK2N1Q7Z7J9 78 aa4.13□□□□□ -1.75
FOXR2-201ENST00000339140 KRTAP5-3Q6L8H2 238 aa4.12□□□□□ -1.75
FOXR2-201ENST00000339140 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
FOXR2-201ENST00000339140 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
FOXR2-201ENST00000339140 TNP1P09430 55 aa4.03□□□□□ -1.76
FOXR2-201ENST00000339140 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
FOXR2-201ENST00000339140 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
FOXR2-201ENST00000339140 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
FOXR2-201ENST00000339140 RNF213Q63HN8 5207 aa3.95□□□□□ -1.78
FOXR2-201ENST00000339140 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
FOXR2-201ENST00000339140 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
FOXR2-201ENST00000339140 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
FOXR2-201ENST00000339140 MUC2Q02817 5179 aa3.89□□□□□ -1.79
FOXR2-201ENST00000339140 FAT4Q6V0I7 4981 aa3.83□□□□□ -1.8
FOXR2-201ENST00000339140 PRO2289Q9P1D8 64 aa3.81□□□□□ -1.8
FOXR2-201ENST00000339140 MT1HP80294 61 aa3.78□□□□□ -1.8
FOXR2-201ENST00000339140 INE1O15225 51 aa3.78□□□□□ -1.81
FOXR2-201ENST00000339140 CRCT1Q9UGL9 99 aa3.76□□□□□ -1.81
FOXR2-201ENST00000339140 SPRR2GQ9BYE4 73 aa3.76□□□□□ -1.81
FOXR2-201ENST00000339140 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
FOXR2-201ENST00000339140 M0R2T5 61 aa3.72□□□□□ -1.81
FOXR2-201ENST00000339140 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
FOXR2-201ENST00000339140 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
FOXR2-201ENST00000339140 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
FOXR2-201ENST00000339140 KRTAP8-1Q8IUC2 63 aa3.67□□□□□ -1.82
FOXR2-201ENST00000339140 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
FOXR2-201ENST00000339140 MT2AP02795 61 aa3.63□□□□□ -1.83
FOXR2-201ENST00000339140 MT1FP04733 61 aa3.6□□□□□ -1.83
FOXR2-201ENST00000339140 KRTAP10-10P60014 251 aa3.59□□□□□ -1.83
FOXR2-201ENST00000339140 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
FOXR2-201ENST00000339140 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
FOXR2-201ENST00000339140 KRTAP19-8Q3LI54 63 aa3.55□□□□□ -1.84
FOXR2-201ENST00000339140 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms