RNA–Protein interactions for RNA: ENST00000337495.9

SCMH1-202, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2 BASIC

Gene SCMH1, Length 3,108 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-202ENST00000337495 Q6ZSA8 131 aa5.46□□□□□ -1.54
SCMH1-202ENST00000337495 Q8N1X5 172 aa5.46□□□□□ -1.54
SCMH1-202ENST00000337495 KRTAP4-5Q9BYR2 181 aa5.44□□□□□ -1.54
SCMH1-202ENST00000337495 FAM229AH3BQW9 127 aa5.43□□□□□ -1.54
SCMH1-202ENST00000337495 HERC1Q15751 4861 aa5.41□□□□□ -1.54
SCMH1-202ENST00000337495 TYMSOSQ8TAI1 123 aa5.41□□□□□ -1.54
SCMH1-202ENST00000337495 FAT3Q8TDW7 4589 aa5.4□□□□□ -1.54
SCMH1-202ENST00000337495 KRTAP16-1A8MUX0 517 aa5.39□□□□□ -1.55
SCMH1-202ENST00000337495 A0A1B0GU33 70 aa5.37□□□□□ -1.55
SCMH1-202ENST00000337495 C20orf166-AS1Q96NR2 134 aa5.34□□□□□ -1.55
SCMH1-202ENST00000337495 Q5VSD8 79 aa5.32□□□□□ -1.56
SCMH1-202ENST00000337495 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
SCMH1-202ENST00000337495 K7ERS5 55 aa5.3□□□□□ -1.56
SCMH1-202ENST00000337495 H1FX-AS1Q4G0G2 97 aa5.29□□□□□ -1.56
SCMH1-202ENST00000337495 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
SCMH1-202ENST00000337495 KRTAP10-4P60372 401 aaPredicted RBP5.27□□□□□ -1.57
SCMH1-202ENST00000337495 PKHD1L1Q86WI1 4243 aa5.27□□□□□ -1.57
SCMH1-202ENST00000337495 KRTAP13-2Q52LG2 175 aa5.24□□□□□ -1.57
SCMH1-202ENST00000337495 A0A0D9SG42 100 aa5.24□□□□□ -1.57
SCMH1-202ENST00000337495 SEC61BP60468 96 aaKnown RBP5.24□□□□□ -1.57
SCMH1-202ENST00000337495 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
SCMH1-202ENST00000337495 COX6B2Q6YFQ2 88 aa5.2□□□□□ -1.58
SCMH1-202ENST00000337495 RNF213Q63HN8 5207 aa5.19□□□□□ -1.58
SCMH1-202ENST00000337495 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
SCMH1-202ENST00000337495 LCE2DQ5TA82 110 aaPredicted RBP5.18□□□□□ -1.58
SCMH1-202ENST00000337495 TNXBP22105 4242 aa5.17□□□□□ -1.58
SCMH1-202ENST00000337495 LRP2P98164 4655 aa5.17□□□□□ -1.58
SCMH1-202ENST00000337495 MUC2Q02817 5179 aa5.13□□□□□ -1.59
SCMH1-202ENST00000337495 KRTAP1-4P0C5Y4 121 aa5.12□□□□□ -1.59
SCMH1-202ENST00000337495 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
SCMH1-202ENST00000337495 RPL37P61927 97 aaKnown RBP5.12□□□□□ -1.59
SCMH1-202ENST00000337495 KRTAP3-1Q9BYR8 98 aa5.12□□□□□ -1.59
SCMH1-202ENST00000337495 LPAP08519 4548 aa5.12□□□□□ -1.59
SCMH1-202ENST00000337495 MT1HL1P0DM35 61 aa5.08□□□□□ -1.6
SCMH1-202ENST00000337495 KRTAP13-4Q3LI77 160 aa5.08□□□□□ -1.6
SCMH1-202ENST00000337495 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
SCMH1-202ENST00000337495 C9orf92A6NGG3 77 aa5.06□□□□□ -1.6
SCMH1-202ENST00000337495 KRTAP10-8P60410 259 aa4.99□□□□□ -1.61
SCMH1-202ENST00000337495 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
SCMH1-202ENST00000337495 KRTAP3-3Q9BYR6 98 aa4.96□□□□□ -1.62
SCMH1-202ENST00000337495 KRTAP3-2Q9BYR7 98 aa4.96□□□□□ -1.62
SCMH1-202ENST00000337495 S4R3F8 94 aa4.96□□□□□ -1.62
SCMH1-202ENST00000337495 KRTAP12-2P59991 146 aa4.96□□□□□ -1.62
SCMH1-202ENST00000337495 FAT4Q6V0I7 4981 aa4.89□□□□□ -1.63
SCMH1-202ENST00000337495 RPS29P62273 56 aaKnown RBP4.87□□□□□ -1.63
SCMH1-202ENST00000337495 XP32Q5T750 250 aa4.82□□□□□ -1.64
SCMH1-202ENST00000337495 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
SCMH1-202ENST00000337495 PLAC4Q8WY50 150 aa4.81□□□□□ -1.64
SCMH1-202ENST00000337495 FSIP2Q5CZC0 6907 aa4.76□□□□□ -1.65
SCMH1-202ENST00000337495 MUC17Q685J3 4493 aa4.65□□□□□ -1.66
SCMH1-202ENST00000337495 M0QZ58 72 aa4.57□□□□□ -1.68
SCMH1-202ENST00000337495 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
SCMH1-202ENST00000337495 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
SCMH1-202ENST00000337495 R4GN34 69 aa4.5□□□□□ -1.69
SCMH1-202ENST00000337495 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
SCMH1-202ENST00000337495 LCE2AQ5TA79 106 aaPredicted RBP4.43□□□□□ -1.7
SCMH1-202ENST00000337495 USH2AO75445 5202 aa4.42□□□□□ -1.7
SCMH1-202ENST00000337495 KRTAP19-2Q3LHN2 52 aa4.41□□□□□ -1.7
SCMH1-202ENST00000337495 M0R2T5 61 aa4.4□□□□□ -1.7
SCMH1-202ENST00000337495 LORP23490 312 aaPredicted RBP4.4□□□□□ -1.7
SCMH1-202ENST00000337495 LCE2BO14633 110 aa4.39□□□□□ -1.71
SCMH1-202ENST00000337495 LCE2CQ5TA81 110 aa4.39□□□□□ -1.71
SCMH1-202ENST00000337495 FLGP20930 4061 aaPredicted RBP4.38□□□□□ -1.71
SCMH1-202ENST00000337495 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
SCMH1-202ENST00000337495 PRO2289Q9P1D8 64 aa4.34□□□□□ -1.71
SCMH1-202ENST00000337495 MT1HP80294 61 aa4.31□□□□□ -1.72
SCMH1-202ENST00000337495 KRTAP9-2Q9BYQ4 174 aa4.23□□□□□ -1.73
SCMH1-202ENST00000337495 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
SCMH1-202ENST00000337495 TNP1P09430 55 aa4.17□□□□□ -1.74
SCMH1-202ENST00000337495 INE1O15225 51 aa4.13□□□□□ -1.75
SCMH1-202ENST00000337495 KRTAP9-8Q9BYQ0 159 aa4.1□□□□□ -1.75
SCMH1-202ENST00000337495 KRTAP10-10P60014 251 aa4.08□□□□□ -1.76
SCMH1-202ENST00000337495 MT2AP02795 61 aa4.04□□□□□ -1.76
SCMH1-202ENST00000337495 SSPOA2VEC9 5147 aa4.04□□□□□ -1.76
SCMH1-202ENST00000337495 KRTAP9-6A0A140TA67 174 aa4.03□□□□□ -1.76
SCMH1-202ENST00000337495 MT1FP04733 61 aa4.03□□□□□ -1.76
SCMH1-202ENST00000337495 CRCT1Q9UGL9 99 aa3.99□□□□□ -1.77
SCMH1-202ENST00000337495 KMT2DO14686 5537 aa3.96□□□□□ -1.77
SCMH1-202ENST00000337495 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
SCMH1-202ENST00000337495 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
SCMH1-202ENST00000337495 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
SCMH1-202ENST00000337495 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
SCMH1-202ENST00000337495 MACF1Q9UPN3 7388 aaKnown RBP3.87□□□□□ -1.79
SCMH1-202ENST00000337495 KRTAP19-1Q8IUB9 90 aa3.81□□□□□ -1.8
SCMH1-202ENST00000337495 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
SCMH1-202ENST00000337495 KRTAP19-6Q3LI70 58 aa3.74□□□□□ -1.81
SCMH1-202ENST00000337495 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
SCMH1-202ENST00000337495 MT1BP07438 61 aa3.72□□□□□ -1.81
SCMH1-202ENST00000337495 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
SCMH1-202ENST00000337495 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
SCMH1-202ENST00000337495 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
SCMH1-202ENST00000337495 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
SCMH1-202ENST00000337495 KRTAP19-8Q3LI54 63 aa3.68□□□□□ -1.82
SCMH1-202ENST00000337495 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
SCMH1-202ENST00000337495 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
SCMH1-202ENST00000337495 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
SCMH1-202ENST00000337495 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
SCMH1-202ENST00000337495 MT1XP80297 61 aa3.6□□□□□ -1.83
SCMH1-202ENST00000337495 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
SCMH1-202ENST00000337495 KRTAP4-8A0A0G2JLE6 195 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms