RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ABCA13Q86UQ4 5058 aa6.8□□□□□ -1.32
LIMK1-201ENST00000336180 RPS29P62273 56 aaKnown RBP6.78□□□□□ -1.32
LIMK1-201ENST00000336180 SPATA8Q6RVD6 105 aa6.76□□□□□ -1.33
LIMK1-201ENST00000336180 LPAP08519 4548 aa6.76□□□□□ -1.33
LIMK1-201ENST00000336180 NDUFAF8A1L188 74 aa6.76□□□□□ -1.33
LIMK1-201ENST00000336180 ACYP2P14621 99 aa6.76□□□□□ -1.33
LIMK1-201ENST00000336180 KRTAP25-1Q3LHN0 102 aa6.75□□□□□ -1.33
LIMK1-201ENST00000336180 DMAC1Q96GE9 116 aa6.74□□□□□ -1.33
LIMK1-201ENST00000336180 MT1HL1P0DM35 61 aa6.73□□□□□ -1.33
LIMK1-201ENST00000336180 A8MUU9 505 aa6.72□□□□□ -1.33
LIMK1-201ENST00000336180 C20orf166-AS1Q96NR2 134 aa6.72□□□□□ -1.33
LIMK1-201ENST00000336180 LRP2P98164 4655 aa6.71□□□□□ -1.34
LIMK1-201ENST00000336180 A0A1B0GU69 56 aa6.69□□□□□ -1.34
LIMK1-201ENST00000336180 CRIPTQ9P021 101 aa6.69□□□□□ -1.34
LIMK1-201ENST00000336180 UQCR11O14957 56 aa6.65□□□□□ -1.34
LIMK1-201ENST00000336180 XP32Q5T750 250 aa6.64□□□□□ -1.35
LIMK1-201ENST00000336180 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
LIMK1-201ENST00000336180 HERC2O95714 4834 aa6.62□□□□□ -1.35
LIMK1-201ENST00000336180 LUZP6Q538Z0 58 aa6.59□□□□□ -1.35
LIMK1-201ENST00000336180 SPINT4Q6UDR6 99 aa6.57□□□□□ -1.36
LIMK1-201ENST00000336180 RPL37P61927 97 aaKnown RBP6.55□□□□□ -1.36
LIMK1-201ENST00000336180 COX6B2Q6YFQ2 88 aa6.48□□□□□ -1.37
LIMK1-201ENST00000336180 MUC2Q02817 5179 aa6.47□□□□□ -1.37
LIMK1-201ENST00000336180 HERC1Q15751 4861 aa6.45□□□□□ -1.38
LIMK1-201ENST00000336180 BIRC6Q9NR09 4857 aa6.44□□□□□ -1.38
LIMK1-201ENST00000336180 PCLOQ9Y6V0 5065 aa6.43□□□□□ -1.38
LIMK1-201ENST00000336180 SEC61BP60468 96 aaKnown RBP6.43□□□□□ -1.38
LIMK1-201ENST00000336180 K7ERS5 55 aa6.38□□□□□ -1.39
LIMK1-201ENST00000336180 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
LIMK1-201ENST00000336180 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
LIMK1-201ENST00000336180 KRTAP3-3Q9BYR6 98 aa6.34□□□□□ -1.39
LIMK1-201ENST00000336180 S4R3F8 94 aa6.33□□□□□ -1.4
LIMK1-201ENST00000336180 KRTAP4-1Q9BYQ7 146 aa6.31□□□□□ -1.4
LIMK1-201ENST00000336180 H0YAA0 97 aa6.29□□□□□ -1.4
LIMK1-201ENST00000336180 A0A1B0GU33 70 aa6.27□□□□□ -1.41
LIMK1-201ENST00000336180 A0A0D9SG42 100 aa6.25□□□□□ -1.41
LIMK1-201ENST00000336180 H1FX-AS1Q4G0G2 97 aa6.23□□□□□ -1.41
LIMK1-201ENST00000336180 MUC17Q685J3 4493 aa6.23□□□□□ -1.41
LIMK1-201ENST00000336180 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
LIMK1-201ENST00000336180 RNF213Q63HN8 5207 aa6.2□□□□□ -1.42
LIMK1-201ENST00000336180 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
LIMK1-201ENST00000336180 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
LIMK1-201ENST00000336180 KRTAP3-2Q9BYR7 98 aa6.17□□□□□ -1.42
LIMK1-201ENST00000336180 HMCN2Q8NDA2 5059 aa6.15□□□□□ -1.42
LIMK1-201ENST00000336180 FAT4Q6V0I7 4981 aa6.15□□□□□ -1.42
LIMK1-201ENST00000336180 UBR4Q5T4S7 5183 aa6.12□□□□□ -1.43
LIMK1-201ENST00000336180 LORP23490 312 aaPredicted RBP6.03□□□□□ -1.44
LIMK1-201ENST00000336180 KRTAP19-2Q3LHN2 52 aa5.97□□□□□ -1.45
LIMK1-201ENST00000336180 M0QZ58 72 aa5.95□□□□□ -1.46
LIMK1-201ENST00000336180 KRTAP12-2P59991 146 aa5.95□□□□□ -1.46
LIMK1-201ENST00000336180 R4GN34 69 aa5.9□□□□□ -1.46
LIMK1-201ENST00000336180 FLGP20930 4061 aaPredicted RBP5.86□□□□□ -1.47
LIMK1-201ENST00000336180 KRTAP12-1P59990 96 aa5.86□□□□□ -1.47
LIMK1-201ENST00000336180 M0R2T5 61 aa5.82□□□□□ -1.48
LIMK1-201ENST00000336180 LCE2CQ5TA81 110 aa5.78□□□□□ -1.48
LIMK1-201ENST00000336180 CAMK2N1Q7Z7J9 78 aa5.77□□□□□ -1.49
LIMK1-201ENST00000336180 LCE2DQ5TA82 110 aaPredicted RBP5.71□□□□□ -1.5
LIMK1-201ENST00000336180 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
LIMK1-201ENST00000336180 MT1HP80294 61 aa5.67□□□□□ -1.5
LIMK1-201ENST00000336180 KRTAP10-10P60014 251 aa5.57□□□□□ -1.52
LIMK1-201ENST00000336180 MT1FP04733 61 aa5.55□□□□□ -1.52
LIMK1-201ENST00000336180 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
LIMK1-201ENST00000336180 MT2AP02795 61 aa5.51□□□□□ -1.53
LIMK1-201ENST00000336180 KRTAP19-1Q8IUB9 90 aa5.48□□□□□ -1.53
LIMK1-201ENST00000336180 KRTAP9-8Q9BYQ0 159 aa5.47□□□□□ -1.53
LIMK1-201ENST00000336180 USH2AO75445 5202 aa5.45□□□□□ -1.54
LIMK1-201ENST00000336180 SPRR2GQ9BYE4 73 aa5.37□□□□□ -1.55
LIMK1-201ENST00000336180 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
LIMK1-201ENST00000336180 TNP1P09430 55 aa5.24□□□□□ -1.57
LIMK1-201ENST00000336180 MT1BP07438 61 aa5.24□□□□□ -1.57
LIMK1-201ENST00000336180 KRTAP9-3Q9BYQ3 159 aa5.23□□□□□ -1.57
LIMK1-201ENST00000336180 KMT2DO14686 5537 aa5.2□□□□□ -1.58
LIMK1-201ENST00000336180 LCE2AQ5TA79 106 aaPredicted RBP5.17□□□□□ -1.58
LIMK1-201ENST00000336180 LCE2BO14633 110 aa5.16□□□□□ -1.58
LIMK1-201ENST00000336180 KRTAP19-8Q3LI54 63 aa5.15□□□□□ -1.59
LIMK1-201ENST00000336180 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
LIMK1-201ENST00000336180 MT1XP80297 61 aa5.14□□□□□ -1.59
LIMK1-201ENST00000336180 KRTAP10-5P60370 271 aa5.13□□□□□ -1.59
LIMK1-201ENST00000336180 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
LIMK1-201ENST00000336180 INE1O15225 51 aa5.12□□□□□ -1.59
LIMK1-201ENST00000336180 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
LIMK1-201ENST00000336180 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
LIMK1-201ENST00000336180 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
LIMK1-201ENST00000336180 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
LIMK1-201ENST00000336180 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
LIMK1-201ENST00000336180 KRTAP4-8A0A0G2JLE6 195 aa4.92□□□□□ -1.62
LIMK1-201ENST00000336180 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
LIMK1-201ENST00000336180 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
LIMK1-201ENST00000336180 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
LIMK1-201ENST00000336180 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
LIMK1-201ENST00000336180 FCGBPQ9Y6R7 5405 aaPredicted RBP4.68□□□□□ -1.66
LIMK1-201ENST00000336180 MUC12Q9UKN1 5478 aa4.66□□□□□ -1.66
LIMK1-201ENST00000336180 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
LIMK1-201ENST00000336180 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
LIMK1-201ENST00000336180 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
LIMK1-201ENST00000336180 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
LIMK1-201ENST00000336180 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
LIMK1-201ENST00000336180 SYNE2Q8WXH0 6885 aaKnown RBP4.5□□□□□ -1.69
LIMK1-201ENST00000336180 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
LIMK1-201ENST00000336180 MT1EP04732 61 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms