RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 TRAV22A0A0B4J277 110 aa8.85□□□□□ -0.99
HLA-F-217ENST00000334668 MT1FP04733 61 aa8.83□□□□□ -1
HLA-F-217ENST00000334668 UQCRQO14949 82 aa8.82□□□□□ -1
HLA-F-217ENST00000334668 CYP4F30PQ9H0H9 118 aa8.82□□□□□ -1
HLA-F-217ENST00000334668 LOC101927531A0A1B0GV80 90 aa8.78□□□□□ -1
HLA-F-217ENST00000334668 KRTAP10-10P60014 251 aa8.76□□□□□ -1.01
HLA-F-217ENST00000334668 C1orf64Q8NEQ6 169 aa8.76□□□□□ -1.01
HLA-F-217ENST00000334668 ATOX1O00244 68 aa8.74□□□□□ -1.01
HLA-F-217ENST00000334668 H0Y9P7 68 aa8.73□□□□□ -1.01
HLA-F-217ENST00000334668 K7ERU9 68 aa8.73□□□□□ -1.01
HLA-F-217ENST00000334668 OCR1Q9BZK8 76 aa8.73□□□□□ -1.01
HLA-F-217ENST00000334668 S4R3F8 94 aa8.66□□□□□ -1.02
HLA-F-217ENST00000334668 USH2AO75445 5202 aa8.66□□□□□ -1.02
HLA-F-217ENST00000334668 IMUPQ9GZP8 106 aa8.64□□□□□ -1.03
HLA-F-217ENST00000334668 LCA10Q71F78 164 aa8.62□□□□□ -1.03
HLA-F-217ENST00000334668 C5orf47Q569G3 176 aa8.61□□□□□ -1.03
HLA-F-217ENST00000334668 LINC00208Q96KT6 92 aa8.61□□□□□ -1.03
HLA-F-217ENST00000334668 MP68P56378 58 aa8.6□□□□□ -1.03
HLA-F-217ENST00000334668 MT-ATP8P03928 68 aa8.59□□□□□ -1.03
HLA-F-217ENST00000334668 CSAG1Q6PB30 78 aa8.57□□□□□ -1.04
HLA-F-217ENST00000334668 H3BPC8 53 aa8.56□□□□□ -1.04
HLA-F-217ENST00000334668 KLKP1Q107X0 134 aa8.56□□□□□ -1.04
HLA-F-217ENST00000334668 SCGB1A1P11684 91 aa8.55□□□□□ -1.04
HLA-F-217ENST00000334668 SSPOA2VEC9 5147 aa8.53□□□□□ -1.04
HLA-F-217ENST00000334668 A8MUN3 132 aa8.5□□□□□ -1.05
HLA-F-217ENST00000334668 FAM236AA0A1B0GUQ0 79 aa8.45□□□□□ -1.06
HLA-F-217ENST00000334668 FAM236BA0A1B0GV22 79 aa8.45□□□□□ -1.06
HLA-F-217ENST00000334668 SMIM20Q8N5G0 67 aa8.43□□□□□ -1.06
HLA-F-217ENST00000334668 TRAV7A0A075B6U4 112 aa8.41□□□□□ -1.06
HLA-F-217ENST00000334668 NDUFC1O43677 76 aa8.38□□□□□ -1.07
HLA-F-217ENST00000334668 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
HLA-F-217ENST00000334668 H0YAA0 97 aa8.32□□□□□ -1.08
HLA-F-217ENST00000334668 FCGBPQ9Y6R7 5405 aaPredicted RBP8.32□□□□□ -1.08
HLA-F-217ENST00000334668 SPRR2GQ9BYE4 73 aa8.31□□□□□ -1.08
HLA-F-217ENST00000334668 KRTAP19-6Q3LI70 58 aa8.3□□□□□ -1.08
HLA-F-217ENST00000334668 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
HLA-F-217ENST00000334668 CRIPTQ9P021 101 aa8.23□□□□□ -1.09
HLA-F-217ENST00000334668 SERP2Q8N6R1 65 aa8.21□□□□□ -1.1
HLA-F-217ENST00000334668 MT1BP07438 61 aa8.18□□□□□ -1.1
HLA-F-217ENST00000334668 SNURFQ9Y675 71 aa8.18□□□□□ -1.1
HLA-F-217ENST00000334668 ACYP2P14621 99 aa8.16□□□□□ -1.1
HLA-F-217ENST00000334668 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
HLA-F-217ENST00000334668 Q5VV11 94 aa8.14□□□□□ -1.11
HLA-F-217ENST00000334668 C20orf197Q8N268 126 aa8.14□□□□□ -1.11
HLA-F-217ENST00000334668 SPANXA2-OT1Q8N9U9 137 aa8.1□□□□□ -1.11
HLA-F-217ENST00000334668 P0C880 135 aa8.04□□□□□ -1.12
HLA-F-217ENST00000334668 COX7CP15954 63 aa8.02□□□□□ -1.13
HLA-F-217ENST00000334668 SPTSSBQ8NFR3 76 aa8□□□□□ -1.13
HLA-F-217ENST00000334668 ANAPC13Q9BS18 74 aa7.98□□□□□ -1.13
HLA-F-217ENST00000334668 CHKB-CPT1BH3BT56 60 aa7.95□□□□□ -1.14
HLA-F-217ENST00000334668 A6NN06 94 aa7.94□□□□□ -1.14
HLA-F-217ENST00000334668 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
HLA-F-217ENST00000334668 R4GN34 69 aa7.93□□□□□ -1.14
HLA-F-217ENST00000334668 MACF1Q9UPN3 7388 aaKnown RBP7.91□□□□□ -1.14
HLA-F-217ENST00000334668 H7BZZ5 65 aa7.87□□□□□ -1.15
HLA-F-217ENST00000334668 M0QZ58 72 aa7.87□□□□□ -1.15
HLA-F-217ENST00000334668 CYSTM1Q9H1C7 97 aa7.87□□□□□ -1.15
HLA-F-217ENST00000334668 SYNE2Q8WXH0 6885 aaKnown RBP7.85□□□□□ -1.15
HLA-F-217ENST00000334668 LCE1AQ5T7P2 110 aa7.84□□□□□ -1.15
HLA-F-217ENST00000334668 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
HLA-F-217ENST00000334668 PCP4P48539 62 aa7.83□□□□□ -1.16
HLA-F-217ENST00000334668 COA5Q86WW8 74 aa7.83□□□□□ -1.16
HLA-F-217ENST00000334668 PLAC4Q8WY50 150 aa7.77□□□□□ -1.17
HLA-F-217ENST00000334668 MT1XP80297 61 aa7.73□□□□□ -1.17
HLA-F-217ENST00000334668 KRTAP6-3Q3LI67 103 aa7.72□□□□□ -1.17
HLA-F-217ENST00000334668 LINC01554Q52M75 96 aa7.72□□□□□ -1.17
HLA-F-217ENST00000334668 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
HLA-F-217ENST00000334668 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
HLA-F-217ENST00000334668 SEC61GP60059 68 aa7.56□□□□□ -1.2
HLA-F-217ENST00000334668 TMEM258P61165 79 aa7.56□□□□□ -1.2
HLA-F-217ENST00000334668 SERP1Q9Y6X1 66 aa7.55□□□□□ -1.2
HLA-F-217ENST00000334668 ATP5EP56381 51 aaPredicted RBP7.53□□□□□ -1.2
HLA-F-217ENST00000334668 KRTAP12-2P59991 146 aa7.51□□□□□ -1.21
HLA-F-217ENST00000334668 KRTAP5-9P26371 169 aa7.49□□□□□ -1.21
HLA-F-217ENST00000334668 KMT2DO14686 5537 aa7.47□□□□□ -1.21
HLA-F-217ENST00000334668 A0A1B0GU33 70 aa7.45□□□□□ -1.22
HLA-F-217ENST00000334668 NEBP20929 6669 aa7.43□□□□□ -1.22
HLA-F-217ENST00000334668 MUC12Q9UKN1 5478 aa7.43□□□□□ -1.22
HLA-F-217ENST00000334668 SPATA8Q6RVD6 105 aa7.4□□□□□ -1.22
HLA-F-217ENST00000334668 A0A1B0GU69 56 aa7.39□□□□□ -1.23
HLA-F-217ENST00000334668 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
HLA-F-217ENST00000334668 KRTAP10-12P60413 245 aa7.35□□□□□ -1.23
HLA-F-217ENST00000334668 KRTAP2-2Q9BYT5 123 aa7.35□□□□□ -1.23
HLA-F-217ENST00000334668 A0A0D9SG42 100 aa7.34□□□□□ -1.23
HLA-F-217ENST00000334668 KRTAP20-1Q3LI63 56 aa7.31□□□□□ -1.24
HLA-F-217ENST00000334668 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
HLA-F-217ENST00000334668 KRTAP8-1Q8IUC2 63 aa7.3□□□□□ -1.24
HLA-F-217ENST00000334668 LINC01558Q9Y6Z2 57 aa7.28□□□□□ -1.24
HLA-F-217ENST00000334668 MDN1Q9NU22 5596 aa7.28□□□□□ -1.24
HLA-F-217ENST00000334668 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
HLA-F-217ENST00000334668 RPS28P62857 69 aaKnown RBP7.25□□□□□ -1.25
HLA-F-217ENST00000334668 SPRR2FQ96RM1 72 aa7.25□□□□□ -1.25
HLA-F-217ENST00000334668 PRR15LQ9BU68 103 aa7.24□□□□□ -1.25
HLA-F-217ENST00000334668 SMIM26A0A096LP01 95 aa7.23□□□□□ -1.25
HLA-F-217ENST00000334668 SPINT4Q6UDR6 99 aa7.22□□□□□ -1.25
HLA-F-217ENST00000334668 A8MU10 97 aa7.17□□□□□ -1.26
HLA-F-217ENST00000334668 KRTAP5-11Q6L8G4 156 aa7.16□□□□□ -1.26
HLA-F-217ENST00000334668 KRTAP5-6Q6L8G9 129 aaPredicted RBP7.13□□□□□ -1.27
HLA-F-217ENST00000334668 SPRR2EP22531 72 aa7.08□□□□□ -1.28
HLA-F-217ENST00000334668 SPRR2BP35325 72 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 1862.9 ms