RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 XP32Q5T750 250 aa7.27□□□□□ -1.25
TUBB2A-201ENST00000333628 IGKV2D-30A0A075B6S6 120 aa7.24□□□□□ -1.25
TUBB2A-201ENST00000333628 C7orf65Q6ZTY9 151 aa7.24□□□□□ -1.25
TUBB2A-201ENST00000333628 FAT4Q6V0I7 4981 aa7.23□□□□□ -1.25
TUBB2A-201ENST00000333628 MUC17Q685J3 4493 aa7.23□□□□□ -1.25
TUBB2A-201ENST00000333628 A0A1B0GU69 56 aa7.2□□□□□ -1.26
TUBB2A-201ENST00000333628 A8MU10 97 aa7.2□□□□□ -1.26
TUBB2A-201ENST00000333628 SPINK7P58062 85 aa7.19□□□□□ -1.26
TUBB2A-201ENST00000333628 SEC61BP60468 96 aaKnown RBP7.18□□□□□ -1.26
TUBB2A-201ENST00000333628 SPTSSBQ8NFR3 76 aa7.18□□□□□ -1.26
TUBB2A-201ENST00000333628 C20orf166-AS1Q96NR2 134 aa7.17□□□□□ -1.26
TUBB2A-201ENST00000333628 A8MUU9 505 aa7.16□□□□□ -1.26
TUBB2A-201ENST00000333628 A6NN06 94 aa7.15□□□□□ -1.27
TUBB2A-201ENST00000333628 RPL37P61927 97 aaKnown RBP7.14□□□□□ -1.27
TUBB2A-201ENST00000333628 KTN1-AS1Q86SY8 53 aa7.14□□□□□ -1.27
TUBB2A-201ENST00000333628 KRTAP4-1Q9BYQ7 146 aa7.13□□□□□ -1.27
TUBB2A-201ENST00000333628 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
TUBB2A-201ENST00000333628 UQCR11O14957 56 aa7.1□□□□□ -1.27
TUBB2A-201ENST00000333628 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
TUBB2A-201ENST00000333628 SEC61GP60059 68 aa7.05□□□□□ -1.28
TUBB2A-201ENST00000333628 MIR22HGQ0VDD5 57 aa7.03□□□□□ -1.28
TUBB2A-201ENST00000333628 FSIP2Q5CZC0 6907 aa7□□□□□ -1.29
TUBB2A-201ENST00000333628 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
TUBB2A-201ENST00000333628 COX6B2Q6YFQ2 88 aa6.92□□□□□ -1.3
TUBB2A-201ENST00000333628 KRTAP19-2Q3LHN2 52 aa6.91□□□□□ -1.3
TUBB2A-201ENST00000333628 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
TUBB2A-201ENST00000333628 KRTAP3-1Q9BYR8 98 aa6.91□□□□□ -1.3
TUBB2A-201ENST00000333628 RBM12B-AS1Q9P1G2 102 aa6.86□□□□□ -1.31
TUBB2A-201ENST00000333628 LCE2DQ5TA82 110 aaPredicted RBP6.85□□□□□ -1.31
TUBB2A-201ENST00000333628 A0A1B0GU33 70 aa6.82□□□□□ -1.32
TUBB2A-201ENST00000333628 MT1HP80294 61 aa6.8□□□□□ -1.32
TUBB2A-201ENST00000333628 H1FX-AS1Q4G0G2 97 aa6.79□□□□□ -1.32
TUBB2A-201ENST00000333628 H0YAA0 97 aa6.76□□□□□ -1.33
TUBB2A-201ENST00000333628 K7ERS5 55 aa6.68□□□□□ -1.34
TUBB2A-201ENST00000333628 FLGP20930 4061 aaPredicted RBP6.67□□□□□ -1.34
TUBB2A-201ENST00000333628 M0R2T5 61 aa6.67□□□□□ -1.34
TUBB2A-201ENST00000333628 PRAC1Q96KF2 57 aa6.65□□□□□ -1.34
TUBB2A-201ENST00000333628 S4R3F8 94 aa6.65□□□□□ -1.35
TUBB2A-201ENST00000333628 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
TUBB2A-201ENST00000333628 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
TUBB2A-201ENST00000333628 KRTAP3-3Q9BYR6 98 aa6.64□□□□□ -1.35
TUBB2A-201ENST00000333628 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
TUBB2A-201ENST00000333628 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
TUBB2A-201ENST00000333628 LINC01554Q52M75 96 aa6.59□□□□□ -1.35
TUBB2A-201ENST00000333628 CSAG1Q6PB30 78 aa6.56□□□□□ -1.36
TUBB2A-201ENST00000333628 KRTAP3-2Q9BYR7 98 aa6.54□□□□□ -1.36
TUBB2A-201ENST00000333628 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
TUBB2A-201ENST00000333628 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
TUBB2A-201ENST00000333628 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
TUBB2A-201ENST00000333628 ROMO1P60602 79 aa6.44□□□□□ -1.38
TUBB2A-201ENST00000333628 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
TUBB2A-201ENST00000333628 M0QZ58 72 aa6.41□□□□□ -1.38
TUBB2A-201ENST00000333628 P0C880 135 aa6.4□□□□□ -1.39
TUBB2A-201ENST00000333628 MT2AP02795 61 aa6.38□□□□□ -1.39
TUBB2A-201ENST00000333628 A0A0D9SG42 100 aa6.35□□□□□ -1.39
TUBB2A-201ENST00000333628 MT1FP04733 61 aa6.33□□□□□ -1.4
TUBB2A-201ENST00000333628 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
TUBB2A-201ENST00000333628 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
TUBB2A-201ENST00000333628 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
TUBB2A-201ENST00000333628 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
TUBB2A-201ENST00000333628 USH2AO75445 5202 aa6.23□□□□□ -1.41
TUBB2A-201ENST00000333628 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
TUBB2A-201ENST00000333628 LCE2BO14633 110 aa6.21□□□□□ -1.42
TUBB2A-201ENST00000333628 SPINT4Q6UDR6 99 aa6.19□□□□□ -1.42
TUBB2A-201ENST00000333628 CRIPTQ9P021 101 aa6.19□□□□□ -1.42
TUBB2A-201ENST00000333628 FCGBPQ9Y6R7 5405 aaPredicted RBP6.18□□□□□ -1.42
TUBB2A-201ENST00000333628 R4GN34 69 aa6.15□□□□□ -1.42
TUBB2A-201ENST00000333628 SYNE2Q8WXH0 6885 aaKnown RBP6.12□□□□□ -1.43
TUBB2A-201ENST00000333628 MACF1Q9UPN3 7388 aaKnown RBP6.06□□□□□ -1.44
TUBB2A-201ENST00000333628 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
TUBB2A-201ENST00000333628 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
TUBB2A-201ENST00000333628 SPRR2GQ9BYE4 73 aa5.98□□□□□ -1.45
TUBB2A-201ENST00000333628 KRTAP19-6Q3LI70 58 aa5.93□□□□□ -1.46
TUBB2A-201ENST00000333628 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.46
TUBB2A-201ENST00000333628 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
TUBB2A-201ENST00000333628 PP632Q6XCG6 107 aa5.87□□□□□ -1.47
TUBB2A-201ENST00000333628 MT1BP07438 61 aa5.86□□□□□ -1.47
TUBB2A-201ENST00000333628 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
TUBB2A-201ENST00000333628 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
TUBB2A-201ENST00000333628 H3BS24 57 aa5.79□□□□□ -1.48
TUBB2A-201ENST00000333628 NEBP20929 6669 aa5.76□□□□□ -1.49
TUBB2A-201ENST00000333628 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
TUBB2A-201ENST00000333628 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
TUBB2A-201ENST00000333628 PLAC4Q8WY50 150 aa5.68□□□□□ -1.5
TUBB2A-201ENST00000333628 TNP1P09430 55 aa5.67□□□□□ -1.5
TUBB2A-201ENST00000333628 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
TUBB2A-201ENST00000333628 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
TUBB2A-201ENST00000333628 NDUFAF8A1L188 74 aa5.61□□□□□ -1.51
TUBB2A-201ENST00000333628 MT1XP80297 61 aa5.56□□□□□ -1.52
TUBB2A-201ENST00000333628 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
TUBB2A-201ENST00000333628 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
TUBB2A-201ENST00000333628 MDN1Q9NU22 5596 aa5.44□□□□□ -1.54
TUBB2A-201ENST00000333628 KMT2DO14686 5537 aa5.42□□□□□ -1.54
TUBB2A-201ENST00000333628 KRTAP2-3P0C7H8 128 aa5.4□□□□□ -1.55
TUBB2A-201ENST00000333628 KRTAP2-4Q9BYR9 128 aa5.4□□□□□ -1.55
TUBB2A-201ENST00000333628 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
TUBB2A-201ENST00000333628 KRTAP5-9P26371 169 aa5.35□□□□□ -1.55
TUBB2A-201ENST00000333628 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
TUBB2A-201ENST00000333628 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
TUBB2A-201ENST00000333628 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms