RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 MYCBP2O75592 4640 aa5.55□□□□□ -1.52
PRAMEF1-201ENST00000332296 HERC2O95714 4834 aa5.54□□□□□ -1.52
PRAMEF1-201ENST00000332296 KRTAP4-5Q9BYR2 181 aa5.54□□□□□ -1.52
PRAMEF1-201ENST00000332296 LINC00304Q8N9R0 145 aa5.52□□□□□ -1.53
PRAMEF1-201ENST00000332296 ABCA13Q86UQ4 5058 aa5.51□□□□□ -1.53
PRAMEF1-201ENST00000332296 FAT3Q8TDW7 4589 aa5.5□□□□□ -1.53
PRAMEF1-201ENST00000332296 SPATA8Q6RVD6 105 aa5.49□□□□□ -1.53
PRAMEF1-201ENST00000332296 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
PRAMEF1-201ENST00000332296 C9orf92A6NGG3 77 aa5.46□□□□□ -1.53
PRAMEF1-201ENST00000332296 RPS29P62273 56 aaKnown RBP5.46□□□□□ -1.53
PRAMEF1-201ENST00000332296 TNXBP22105 4242 aa5.46□□□□□ -1.53
PRAMEF1-201ENST00000332296 UQCR11O14957 56 aa5.46□□□□□ -1.54
PRAMEF1-201ENST00000332296 ADM2Q7Z4H4 148 aa5.45□□□□□ -1.54
PRAMEF1-201ENST00000332296 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
PRAMEF1-201ENST00000332296 DMBT1Q9UGM3 2413 aaPredicted RBP5.43□□□□□ -1.54
PRAMEF1-201ENST00000332296 KRTAP10-8P60410 259 aa5.42□□□□□ -1.54
PRAMEF1-201ENST00000332296 PCLOQ9Y6V0 5065 aa5.41□□□□□ -1.54
PRAMEF1-201ENST00000332296 A8MUU9 505 aa5.41□□□□□ -1.54
PRAMEF1-201ENST00000332296 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
PRAMEF1-201ENST00000332296 C20orf166-AS1Q96NR2 134 aa5.41□□□□□ -1.54
PRAMEF1-201ENST00000332296 MT1HL1P0DM35 61 aa5.39□□□□□ -1.55
PRAMEF1-201ENST00000332296 H0YAA0 97 aa5.33□□□□□ -1.56
PRAMEF1-201ENST00000332296 A0A1B0GU33 70 aa5.26□□□□□ -1.57
PRAMEF1-201ENST00000332296 HERC1Q15751 4861 aa5.26□□□□□ -1.57
PRAMEF1-201ENST00000332296 H1FX-AS1Q4G0G2 97 aa5.25□□□□□ -1.57
PRAMEF1-201ENST00000332296 CSAG1Q6PB30 78 aa5.25□□□□□ -1.57
PRAMEF1-201ENST00000332296 COX6B2Q6YFQ2 88 aa5.25□□□□□ -1.57
PRAMEF1-201ENST00000332296 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
PRAMEF1-201ENST00000332296 LINC01554Q52M75 96 aa5.22□□□□□ -1.57
PRAMEF1-201ENST00000332296 LPAP08519 4548 aa5.16□□□□□ -1.58
PRAMEF1-201ENST00000332296 RPL37P61927 97 aaKnown RBP5.15□□□□□ -1.59
PRAMEF1-201ENST00000332296 XP32Q5T750 250 aa5.15□□□□□ -1.59
PRAMEF1-201ENST00000332296 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
PRAMEF1-201ENST00000332296 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
PRAMEF1-201ENST00000332296 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
PRAMEF1-201ENST00000332296 LRP2P98164 4655 aa5.12□□□□□ -1.59
PRAMEF1-201ENST00000332296 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
PRAMEF1-201ENST00000332296 HMCN2Q8NDA2 5059 aa5.11□□□□□ -1.59
PRAMEF1-201ENST00000332296 TPRXLQ17RH7 258 aa5.09□□□□□ -1.59
PRAMEF1-201ENST00000332296 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
PRAMEF1-201ENST00000332296 S4R3F8 94 aa5.07□□□□□ -1.6
PRAMEF1-201ENST00000332296 CRIPTQ9P021 101 aa5.06□□□□□ -1.6
PRAMEF1-201ENST00000332296 A0A0D9SG42 100 aa5.04□□□□□ -1.6
PRAMEF1-201ENST00000332296 K7ERS5 55 aa5.04□□□□□ -1.6
PRAMEF1-201ENST00000332296 P0C880 135 aa5.03□□□□□ -1.6
PRAMEF1-201ENST00000332296 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
PRAMEF1-201ENST00000332296 ROMO1P60602 79 aa4.99□□□□□ -1.61
PRAMEF1-201ENST00000332296 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
PRAMEF1-201ENST00000332296 UBR4Q5T4S7 5183 aa4.93□□□□□ -1.62
PRAMEF1-201ENST00000332296 KRTAP12-2P59991 146 aa4.92□□□□□ -1.62
PRAMEF1-201ENST00000332296 MUC2Q02817 5179 aa4.91□□□□□ -1.62
PRAMEF1-201ENST00000332296 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
PRAMEF1-201ENST00000332296 KRTAP9-7A8MTY7 169 aa4.91□□□□□ -1.62
PRAMEF1-201ENST00000332296 MUC17Q685J3 4493 aa4.89□□□□□ -1.63
PRAMEF1-201ENST00000332296 C10orf95Q9H7T3 257 aa4.88□□□□□ -1.63
PRAMEF1-201ENST00000332296 KRTAP12-1P59990 96 aa4.88□□□□□ -1.63
PRAMEF1-201ENST00000332296 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
PRAMEF1-201ENST00000332296 RNF213Q63HN8 5207 aa4.87□□□□□ -1.63
PRAMEF1-201ENST00000332296 KRTAP4-1Q9BYQ7 146 aa4.86□□□□□ -1.63
PRAMEF1-201ENST00000332296 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
PRAMEF1-201ENST00000332296 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
PRAMEF1-201ENST00000332296 M0QZ58 72 aa4.79□□□□□ -1.64
PRAMEF1-201ENST00000332296 FAT4Q6V0I7 4981 aa4.7□□□□□ -1.66
PRAMEF1-201ENST00000332296 R4GN34 69 aa4.7□□□□□ -1.66
PRAMEF1-201ENST00000332296 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
PRAMEF1-201ENST00000332296 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
PRAMEF1-201ENST00000332296 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
PRAMEF1-201ENST00000332296 KRTAP19-1Q8IUB9 90 aa4.67□□□□□ -1.66
PRAMEF1-201ENST00000332296 FLGP20930 4061 aaPredicted RBP4.65□□□□□ -1.66
PRAMEF1-201ENST00000332296 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.67
PRAMEF1-201ENST00000332296 MT1HP80294 61 aa4.55□□□□□ -1.68
PRAMEF1-201ENST00000332296 M0R2T5 61 aa4.53□□□□□ -1.68
PRAMEF1-201ENST00000332296 PLAC4Q8WY50 150 aa4.42□□□□□ -1.7
PRAMEF1-201ENST00000332296 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
PRAMEF1-201ENST00000332296 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
PRAMEF1-201ENST00000332296 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
PRAMEF1-201ENST00000332296 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
PRAMEF1-201ENST00000332296 MT2AP02795 61 aa4.34□□□□□ -1.71
PRAMEF1-201ENST00000332296 MT1FP04733 61 aa4.32□□□□□ -1.72
PRAMEF1-201ENST00000332296 KRTAP10-10P60014 251 aa4.32□□□□□ -1.72
PRAMEF1-201ENST00000332296 TNP1P09430 55 aa4.29□□□□□ -1.72
PRAMEF1-201ENST00000332296 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
PRAMEF1-201ENST00000332296 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
PRAMEF1-201ENST00000332296 MT3P25713 68 aa4.22□□□□□ -1.73
PRAMEF1-201ENST00000332296 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
PRAMEF1-201ENST00000332296 KRTAP4-8Q9BYQ9 185 aa4.17□□□□□ -1.74
PRAMEF1-201ENST00000332296 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
PRAMEF1-201ENST00000332296 KRTAP9-2Q9BYQ4 174 aa4.13□□□□□ -1.75
PRAMEF1-201ENST00000332296 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
PRAMEF1-201ENST00000332296 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
PRAMEF1-201ENST00000332296 USH2AO75445 5202 aa4.09□□□□□ -1.75
PRAMEF1-201ENST00000332296 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.76
PRAMEF1-201ENST00000332296 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.76
PRAMEF1-201ENST00000332296 KRTAP19-8Q3LI54 63 aa4.07□□□□□ -1.76
PRAMEF1-201ENST00000332296 MT1BP07438 61 aa4.05□□□□□ -1.76
PRAMEF1-201ENST00000332296 LCE3BQ5TA77 95 aa4.03□□□□□ -1.76
PRAMEF1-201ENST00000332296 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
PRAMEF1-201ENST00000332296 KRTAP10-5P60370 271 aa4.02□□□□□ -1.77
PRAMEF1-201ENST00000332296 MT1XP80297 61 aa4.02□□□□□ -1.77
PRAMEF1-201ENST00000332296 SSPOA2VEC9 5147 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms