RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 A0A1B0GU69 56 aa8.14□□□□□ -1.11
PGBD2-201ENST00000329291 SPTSSBQ8NFR3 76 aa8.05□□□□□ -1.12
PGBD2-201ENST00000329291 SEC61BP60468 96 aaKnown RBP8.05□□□□□ -1.12
PGBD2-201ENST00000329291 CDC42SE1Q9NRR8 79 aa8.05□□□□□ -1.12
PGBD2-201ENST00000329291 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
PGBD2-201ENST00000329291 PCLOQ9Y6V0 5065 aa8□□□□□ -1.13
PGBD2-201ENST00000329291 SEC61GP60059 68 aa7.96□□□□□ -1.14
PGBD2-201ENST00000329291 RBM12B-AS1Q9P1G2 102 aa7.95□□□□□ -1.14
PGBD2-201ENST00000329291 MUC17Q685J3 4493 aa7.95□□□□□ -1.14
PGBD2-201ENST00000329291 HERC1Q15751 4861 aa7.94□□□□□ -1.14
PGBD2-201ENST00000329291 UQCR11O14957 56 aa7.93□□□□□ -1.14
PGBD2-201ENST00000329291 S4R3F8 94 aa7.93□□□□□ -1.14
PGBD2-201ENST00000329291 SPATA8Q6RVD6 105 aa7.93□□□□□ -1.14
PGBD2-201ENST00000329291 H1FX-AS1Q4G0G2 97 aa7.92□□□□□ -1.14
PGBD2-201ENST00000329291 KRTAP4-1Q9BYQ7 146 aa7.91□□□□□ -1.14
PGBD2-201ENST00000329291 MIR22HGQ0VDD5 57 aa7.9□□□□□ -1.14
PGBD2-201ENST00000329291 PMAIP1Q13794 54 aa7.87□□□□□ -1.15
PGBD2-201ENST00000329291 A0A1B0GU33 70 aa7.84□□□□□ -1.16
PGBD2-201ENST00000329291 H0YAA0 97 aa7.82□□□□□ -1.16
PGBD2-201ENST00000329291 KRTAP10-6P60371 365 aaPredicted RBP7.82□□□□□ -1.16
PGBD2-201ENST00000329291 HMCN2Q8NDA2 5059 aa7.82□□□□□ -1.16
PGBD2-201ENST00000329291 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
PGBD2-201ENST00000329291 MUC2Q02817 5179 aa7.81□□□□□ -1.16
PGBD2-201ENST00000329291 A6NN06 94 aa7.81□□□□□ -1.16
PGBD2-201ENST00000329291 P0C880 135 aa7.73□□□□□ -1.17
PGBD2-201ENST00000329291 KRTAP19-2Q3LHN2 52 aa7.71□□□□□ -1.18
PGBD2-201ENST00000329291 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
PGBD2-201ENST00000329291 KRTAP13-4Q3LI77 160 aa7.69□□□□□ -1.18
PGBD2-201ENST00000329291 ADM2Q7Z4H4 148 aa7.67□□□□□ -1.18
PGBD2-201ENST00000329291 KTN1-AS1Q86SY8 53 aa7.58□□□□□ -1.2
PGBD2-201ENST00000329291 FLGP20930 4061 aaPredicted RBP7.55□□□□□ -1.2
PGBD2-201ENST00000329291 A0A0D9SG42 100 aa7.55□□□□□ -1.2
PGBD2-201ENST00000329291 UBR4Q5T4S7 5183 aa7.51□□□□□ -1.21
PGBD2-201ENST00000329291 RNF213Q63HN8 5207 aa7.48□□□□□ -1.21
PGBD2-201ENST00000329291 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
PGBD2-201ENST00000329291 PRAC1Q96KF2 57 aa7.44□□□□□ -1.22
PGBD2-201ENST00000329291 FAT4Q6V0I7 4981 aa7.43□□□□□ -1.22
PGBD2-201ENST00000329291 LCE2CQ5TA81 110 aa7.41□□□□□ -1.22
PGBD2-201ENST00000329291 M0QZ58 72 aa7.4□□□□□ -1.23
PGBD2-201ENST00000329291 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
PGBD2-201ENST00000329291 K7ERS5 55 aa7.38□□□□□ -1.23
PGBD2-201ENST00000329291 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
PGBD2-201ENST00000329291 R4GN34 69 aa7.32□□□□□ -1.24
PGBD2-201ENST00000329291 SPINT4Q6UDR6 99 aa7.3□□□□□ -1.24
PGBD2-201ENST00000329291 LINC01554Q52M75 96 aa7.3□□□□□ -1.24
PGBD2-201ENST00000329291 M0R2T5 61 aa7.25□□□□□ -1.25
PGBD2-201ENST00000329291 MT1HP80294 61 aa7.24□□□□□ -1.25
PGBD2-201ENST00000329291 ROMO1P60602 79 aa7.22□□□□□ -1.25
PGBD2-201ENST00000329291 CRIPTQ9P021 101 aa7.19□□□□□ -1.26
PGBD2-201ENST00000329291 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.27
PGBD2-201ENST00000329291 C10orf95Q9H7T3 257 aa7□□□□□ -1.29
PGBD2-201ENST00000329291 KRTAP9-8Q9BYQ0 159 aa7□□□□□ -1.29
PGBD2-201ENST00000329291 MT2AP02795 61 aa6.99□□□□□ -1.29
PGBD2-201ENST00000329291 MT1FP04733 61 aa6.98□□□□□ -1.29
PGBD2-201ENST00000329291 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
PGBD2-201ENST00000329291 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
PGBD2-201ENST00000329291 SPRR2GQ9BYE4 73 aa6.94□□□□□ -1.3
PGBD2-201ENST00000329291 CAMK2N1Q7Z7J9 78 aa6.89□□□□□ -1.31
PGBD2-201ENST00000329291 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
PGBD2-201ENST00000329291 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
PGBD2-201ENST00000329291 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
PGBD2-201ENST00000329291 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
PGBD2-201ENST00000329291 MT1BP07438 61 aa6.67□□□□□ -1.34
PGBD2-201ENST00000329291 TNP1P09430 55 aa6.58□□□□□ -1.36
PGBD2-201ENST00000329291 LCE2BO14633 110 aa6.52□□□□□ -1.37
PGBD2-201ENST00000329291 KRTAP10-5P60370 271 aa6.52□□□□□ -1.37
PGBD2-201ENST00000329291 MT1XP80297 61 aa6.52□□□□□ -1.37
PGBD2-201ENST00000329291 PP632Q6XCG6 107 aa6.49□□□□□ -1.37
PGBD2-201ENST00000329291 USH2AO75445 5202 aa6.47□□□□□ -1.37
PGBD2-201ENST00000329291 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
PGBD2-201ENST00000329291 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.39
PGBD2-201ENST00000329291 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.39
PGBD2-201ENST00000329291 LCE3AQ5TA76 89 aa6.35□□□□□ -1.39
PGBD2-201ENST00000329291 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
PGBD2-201ENST00000329291 LCE2DQ5TA82 110 aaPredicted RBP6.23□□□□□ -1.41
PGBD2-201ENST00000329291 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
PGBD2-201ENST00000329291 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
PGBD2-201ENST00000329291 SSPOA2VEC9 5147 aa6.15□□□□□ -1.43
PGBD2-201ENST00000329291 KMT2DO14686 5537 aa6.14□□□□□ -1.43
PGBD2-201ENST00000329291 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
PGBD2-201ENST00000329291 KRTAP19-6Q3LI70 58 aa6.08□□□□□ -1.44
PGBD2-201ENST00000329291 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
PGBD2-201ENST00000329291 NDUFAF8A1L188 74 aa6.04□□□□□ -1.44
PGBD2-201ENST00000329291 KRTAP4-8A0A0G2JLE6 195 aa6.04□□□□□ -1.44
PGBD2-201ENST00000329291 KRTAP4-8Q9BYQ9 185 aa6.04□□□□□ -1.44
PGBD2-201ENST00000329291 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
PGBD2-201ENST00000329291 KRTAP19-5Q3LI72 72 aa5.97□□□□□ -1.45
PGBD2-201ENST00000329291 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
PGBD2-201ENST00000329291 LUZP6Q538Z0 58 aa5.83□□□□□ -1.48
PGBD2-201ENST00000329291 FCGBPQ9Y6R7 5405 aaPredicted RBP5.82□□□□□ -1.48
PGBD2-201ENST00000329291 KRTAP19-7Q3SYF9 63 aa5.81□□□□□ -1.48
PGBD2-201ENST00000329291 H3BS24 57 aa5.78□□□□□ -1.48
PGBD2-201ENST00000329291 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
PGBD2-201ENST00000329291 CRCT1Q9UGL9 99 aa5.7□□□□□ -1.5
PGBD2-201ENST00000329291 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
PGBD2-201ENST00000329291 MT1EP04732 61 aa5.66□□□□□ -1.5
PGBD2-201ENST00000329291 MT1LQ93083 61 aa5.6□□□□□ -1.51
PGBD2-201ENST00000329291 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
PGBD2-201ENST00000329291 KRTAP9-6A0A140TA67 174 aa5.58□□□□□ -1.52
PGBD2-201ENST00000329291 MUC12Q9UKN1 5478 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms