RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 RYR1P21817 5038 aa8.22□□□□□ -1.09
SYNM-201ENST00000328642 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
SYNM-201ENST00000328642 P0C880 135 aa8.2□□□□□ -1.1
SYNM-201ENST00000328642 H0YAA0 97 aa8.2□□□□□ -1.1
SYNM-201ENST00000328642 DYNC2H1Q8NCM8 4307 aaKnown RBP8.19□□□□□ -1.1
SYNM-201ENST00000328642 VPS13BQ7Z7G8 4022 aa8.18□□□□□ -1.1
SYNM-201ENST00000328642 FAT3Q8TDW7 4589 aa8.18□□□□□ -1.1
SYNM-201ENST00000328642 PKHD1P08F94 4074 aa8.15□□□□□ -1.1
SYNM-201ENST00000328642 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.1
SYNM-201ENST00000328642 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
SYNM-201ENST00000328642 ROMO1P60602 79 aa8.12□□□□□ -1.11
SYNM-201ENST00000328642 SACSQ9NZJ4 4579 aa8.11□□□□□ -1.11
SYNM-201ENST00000328642 MT1HL1P0DM35 61 aa8.11□□□□□ -1.11
SYNM-201ENST00000328642 RYR3Q15413 4870 aa8.11□□□□□ -1.11
SYNM-201ENST00000328642 HECTD4Q9Y4D8 3996 aa8.1□□□□□ -1.11
SYNM-201ENST00000328642 KMT2CQ8NEZ4 4911 aaKnown RBP8.08□□□□□ -1.12
SYNM-201ENST00000328642 APOBP04114 4563 aaKnown RBP8.06□□□□□ -1.12
SYNM-201ENST00000328642 ALMS1Q8TCU4 4167 aa8.03□□□□□ -1.12
SYNM-201ENST00000328642 C10orf95Q9H7T3 257 aa8.01□□□□□ -1.13
SYNM-201ENST00000328642 KRTAP25-1Q3LHN0 102 aa8□□□□□ -1.13
SYNM-201ENST00000328642 FAT2Q9NYQ8 4349 aa7.93□□□□□ -1.14
SYNM-201ENST00000328642 KRTAP17-1Q9BYP8 105 aa7.87□□□□□ -1.15
SYNM-201ENST00000328642 NDUFAF8A1L188 74 aa7.86□□□□□ -1.15
SYNM-201ENST00000328642 KRTAP13-4Q3LI77 160 aa7.84□□□□□ -1.15
SYNM-201ENST00000328642 RYR2Q92736 4967 aa7.83□□□□□ -1.16
SYNM-201ENST00000328642 KRTAP10-6P60371 365 aaPredicted RBP7.77□□□□□ -1.17
SYNM-201ENST00000328642 PLAC4Q8WY50 150 aa7.77□□□□□ -1.17
SYNM-201ENST00000328642 KRTAP12-2P59991 146 aa7.76□□□□□ -1.17
SYNM-201ENST00000328642 LRP2P98164 4655 aa7.75□□□□□ -1.17
SYNM-201ENST00000328642 KRTAP3-3Q9BYR6 98 aa7.75□□□□□ -1.17
SYNM-201ENST00000328642 KRTAP10-10P60014 251 aa7.69□□□□□ -1.18
SYNM-201ENST00000328642 PKD1P98161 4303 aa7.68□□□□□ -1.18
SYNM-201ENST00000328642 LUZP6Q538Z0 58 aa7.67□□□□□ -1.18
SYNM-201ENST00000328642 HERC2O95714 4834 aa7.63□□□□□ -1.19
SYNM-201ENST00000328642 KRTAP3-2Q9BYR7 98 aa7.62□□□□□ -1.19
SYNM-201ENST00000328642 KRTAP12-1P59990 96 aa7.6□□□□□ -1.19
SYNM-201ENST00000328642 EPPK1P58107 5090 aaKnown RBP7.58□□□□□ -1.2
SYNM-201ENST00000328642 HSPG2P98160 4391 aa7.55□□□□□ -1.2
SYNM-201ENST00000328642 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.21
SYNM-201ENST00000328642 LPAP08519 4548 aa7.49□□□□□ -1.21
SYNM-201ENST00000328642 TNP1P09430 55 aa7.49□□□□□ -1.21
SYNM-201ENST00000328642 LORP23490 312 aaPredicted RBP7.48□□□□□ -1.21
SYNM-201ENST00000328642 A0A0A0MQY5 61 aa7.38□□□□□ -1.23
SYNM-201ENST00000328642 ABCA13Q86UQ4 5058 aa7.32□□□□□ -1.24
SYNM-201ENST00000328642 PKHD1L1Q86WI1 4243 aa7.24□□□□□ -1.25
SYNM-201ENST00000328642 PCLOQ9Y6V0 5065 aa7.22□□□□□ -1.25
SYNM-201ENST00000328642 MUC2Q02817 5179 aa7.21□□□□□ -1.26
SYNM-201ENST00000328642 HERC1Q15751 4861 aa7.17□□□□□ -1.26
SYNM-201ENST00000328642 BIRC6Q9NR09 4857 aa7.13□□□□□ -1.27
SYNM-201ENST00000328642 RNF213Q63HN8 5207 aa7.12□□□□□ -1.27
SYNM-201ENST00000328642 TNXBP22105 4242 aa7.11□□□□□ -1.27
SYNM-201ENST00000328642 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
SYNM-201ENST00000328642 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
SYNM-201ENST00000328642 KRTAP15-1Q3LI76 137 aa6.96□□□□□ -1.29
SYNM-201ENST00000328642 UBR4Q5T4S7 5183 aa6.93□□□□□ -1.3
SYNM-201ENST00000328642 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
SYNM-201ENST00000328642 MT1HP80294 61 aa6.89□□□□□ -1.31
SYNM-201ENST00000328642 FSIP2Q5CZC0 6907 aa6.86□□□□□ -1.31
SYNM-201ENST00000328642 MT2AP02795 61 aa6.78□□□□□ -1.32
SYNM-201ENST00000328642 MT1FP04733 61 aa6.78□□□□□ -1.32
SYNM-201ENST00000328642 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
SYNM-201ENST00000328642 KRTAP10-12P60413 245 aa6.64□□□□□ -1.35
SYNM-201ENST00000328642 MUC17Q685J3 4493 aa6.63□□□□□ -1.35
SYNM-201ENST00000328642 LCE2CQ5TA81 110 aa6.61□□□□□ -1.35
SYNM-201ENST00000328642 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
SYNM-201ENST00000328642 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
SYNM-201ENST00000328642 SPRR2GQ9BYE4 73 aa6.56□□□□□ -1.36
SYNM-201ENST00000328642 KRTAP19-2Q3LHN2 52 aa6.55□□□□□ -1.36
SYNM-201ENST00000328642 KRTAP12-3P60328 96 aa6.5□□□□□ -1.37
SYNM-201ENST00000328642 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
SYNM-201ENST00000328642 KRTAP9-8Q9BYQ0 159 aa6.43□□□□□ -1.38
SYNM-201ENST00000328642 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.39
SYNM-201ENST00000328642 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
SYNM-201ENST00000328642 MT1BP07438 61 aa6.27□□□□□ -1.41
SYNM-201ENST00000328642 USH2AO75445 5202 aa6.27□□□□□ -1.41
SYNM-201ENST00000328642 MT1XP80297 61 aa6.22□□□□□ -1.41
SYNM-201ENST00000328642 KRTAP19-8Q3LI54 63 aa6.18□□□□□ -1.42
SYNM-201ENST00000328642 KRTAP9-3Q9BYQ3 159 aa6.18□□□□□ -1.42
SYNM-201ENST00000328642 KRTAP10-5P60370 271 aa6.17□□□□□ -1.42
SYNM-201ENST00000328642 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
SYNM-201ENST00000328642 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
SYNM-201ENST00000328642 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
SYNM-201ENST00000328642 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.43
SYNM-201ENST00000328642 OBSCNQ5VST9 7968 aa6.14□□□□□ -1.43
SYNM-201ENST00000328642 KRTAP8-1Q8IUC2 63 aa6.12□□□□□ -1.43
SYNM-201ENST00000328642 LCE2BO14633 110 aa6.11□□□□□ -1.43
SYNM-201ENST00000328642 KMT2DO14686 5537 aa6□□□□□ -1.45
SYNM-201ENST00000328642 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
SYNM-201ENST00000328642 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
SYNM-201ENST00000328642 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
SYNM-201ENST00000328642 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
SYNM-201ENST00000328642 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
SYNM-201ENST00000328642 INE1O15225 51 aa5.81□□□□□ -1.48
SYNM-201ENST00000328642 LCE2AQ5TA79 106 aaPredicted RBP5.8□□□□□ -1.48
SYNM-201ENST00000328642 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
SYNM-201ENST00000328642 MT1GP13640 62 aa5.59□□□□□ -1.51
SYNM-201ENST00000328642 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
SYNM-201ENST00000328642 MUC12Q9UKN1 5478 aa5.55□□□□□ -1.52
SYNM-201ENST00000328642 SYNE2Q8WXH0 6885 aaKnown RBP5.51□□□□□ -1.53
SYNM-201ENST00000328642 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms