RNA–Protein interactions for RNA: ENST00000326197.11

SCMH1-201, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCMH1, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-201ENST00000326197 C10orf95Q9H7T3 257 aa5.24□□□□□ -1.57
SCMH1-201ENST00000326197 PKD1P98161 4303 aa5.23□□□□□ -1.57
SCMH1-201ENST00000326197 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
SCMH1-201ENST00000326197 FAT1Q14517 4588 aa5.22□□□□□ -1.57
SCMH1-201ENST00000326197 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
SCMH1-201ENST00000326197 FAT2Q9NYQ8 4349 aa5.2□□□□□ -1.58
SCMH1-201ENST00000326197 P0C880 135 aa5.2□□□□□ -1.58
SCMH1-201ENST00000326197 TPRXLQ17RH7 258 aa5.18□□□□□ -1.58
SCMH1-201ENST00000326197 RYR1P21817 5038 aa5.16□□□□□ -1.58
SCMH1-201ENST00000326197 KRTAP3-3Q9BYR6 98 aa5.16□□□□□ -1.58
SCMH1-201ENST00000326197 DYNC1H1Q14204 4646 aaKnown RBP5.15□□□□□ -1.58
SCMH1-201ENST00000326197 KRTAP10-8P60410 259 aa5.15□□□□□ -1.58
SCMH1-201ENST00000326197 KRTAP10-4P60372 401 aaPredicted RBP5.14□□□□□ -1.59
SCMH1-201ENST00000326197 KRTAP3-2Q9BYR7 98 aa5.14□□□□□ -1.59
SCMH1-201ENST00000326197 XP32Q5T750 250 aa5.12□□□□□ -1.59
SCMH1-201ENST00000326197 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
SCMH1-201ENST00000326197 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
SCMH1-201ENST00000326197 APOBP04114 4563 aaKnown RBP5.11□□□□□ -1.59
SCMH1-201ENST00000326197 BIRC6Q9NR09 4857 aa5.11□□□□□ -1.59
SCMH1-201ENST00000326197 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
SCMH1-201ENST00000326197 MYCBP2O75592 4640 aa5.1□□□□□ -1.59
SCMH1-201ENST00000326197 A0A1B0GVY2 172 aa5.1□□□□□ -1.59
SCMH1-201ENST00000326197 Q5VSD8 79 aa5.09□□□□□ -1.59
SCMH1-201ENST00000326197 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
SCMH1-201ENST00000326197 KRTAP4-5Q9BYR2 181 aa5.07□□□□□ -1.6
SCMH1-201ENST00000326197 KRTAP17-1Q9BYP8 105 aa5.06□□□□□ -1.6
SCMH1-201ENST00000326197 HERC2O95714 4834 aa5.04□□□□□ -1.6
SCMH1-201ENST00000326197 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
SCMH1-201ENST00000326197 LRP1Q07954 4544 aaKnown RBP5.01□□□□□ -1.61
SCMH1-201ENST00000326197 HSPG2P98160 4391 aa5.01□□□□□ -1.61
SCMH1-201ENST00000326197 M0QZ58 72 aa5.01□□□□□ -1.61
SCMH1-201ENST00000326197 HERC1Q15751 4861 aa4.99□□□□□ -1.61
SCMH1-201ENST00000326197 R4GN34 69 aa4.98□□□□□ -1.61
SCMH1-201ENST00000326197 PKHD1L1Q86WI1 4243 aa4.98□□□□□ -1.61
SCMH1-201ENST00000326197 J3QL48 77 aa4.96□□□□□ -1.61
SCMH1-201ENST00000326197 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
SCMH1-201ENST00000326197 FAT3Q8TDW7 4589 aa4.94□□□□□ -1.62
SCMH1-201ENST00000326197 MT1HL1P0DM35 61 aa4.82□□□□□ -1.64
SCMH1-201ENST00000326197 CAMK2N1Q7Z7J9 78 aa4.82□□□□□ -1.64
SCMH1-201ENST00000326197 TNXBP22105 4242 aa4.82□□□□□ -1.64
SCMH1-201ENST00000326197 PLAC4Q8WY50 150 aa4.81□□□□□ -1.64
SCMH1-201ENST00000326197 LRP2P98164 4655 aa4.79□□□□□ -1.64
SCMH1-201ENST00000326197 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
SCMH1-201ENST00000326197 UBR4Q5T4S7 5183 aa4.79□□□□□ -1.64
SCMH1-201ENST00000326197 LCE2DQ5TA82 110 aaPredicted RBP4.78□□□□□ -1.64
SCMH1-201ENST00000326197 LUZP6Q538Z0 58 aa4.77□□□□□ -1.65
SCMH1-201ENST00000326197 SEC61BP60468 96 aaKnown RBP4.75□□□□□ -1.65
SCMH1-201ENST00000326197 LPAP08519 4548 aa4.73□□□□□ -1.65
SCMH1-201ENST00000326197 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
SCMH1-201ENST00000326197 MUC2Q02817 5179 aa4.71□□□□□ -1.65
SCMH1-201ENST00000326197 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
SCMH1-201ENST00000326197 HMCN2Q8NDA2 5059 aa4.58□□□□□ -1.68
SCMH1-201ENST00000326197 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
SCMH1-201ENST00000326197 TNP1P09430 55 aa4.55□□□□□ -1.68
SCMH1-201ENST00000326197 FAT4Q6V0I7 4981 aa4.47□□□□□ -1.69
SCMH1-201ENST00000326197 M0R2T5 61 aa4.4□□□□□ -1.71
SCMH1-201ENST00000326197 MUC17Q685J3 4493 aa4.39□□□□□ -1.71
SCMH1-201ENST00000326197 FSIP2Q5CZC0 6907 aa4.37□□□□□ -1.71
SCMH1-201ENST00000326197 KRTAP19-2Q3LHN2 52 aa4.34□□□□□ -1.71
SCMH1-201ENST00000326197 LCE2BO14633 110 aa4.31□□□□□ -1.72
SCMH1-201ENST00000326197 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
SCMH1-201ENST00000326197 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
SCMH1-201ENST00000326197 FLGP20930 4061 aaPredicted RBP4.26□□□□□ -1.73
SCMH1-201ENST00000326197 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
SCMH1-201ENST00000326197 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
SCMH1-201ENST00000326197 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
SCMH1-201ENST00000326197 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.74
SCMH1-201ENST00000326197 KRTAP19-1Q8IUB9 90 aa4.15□□□□□ -1.75
SCMH1-201ENST00000326197 LCE2AQ5TA79 106 aaPredicted RBP4.13□□□□□ -1.75
SCMH1-201ENST00000326197 USH2AO75445 5202 aa4.05□□□□□ -1.76
SCMH1-201ENST00000326197 MT1FP04733 61 aa4.05□□□□□ -1.76
SCMH1-201ENST00000326197 PRO2289Q9P1D8 64 aa4.04□□□□□ -1.76
SCMH1-201ENST00000326197 MT2AP02795 61 aa4.03□□□□□ -1.76
SCMH1-201ENST00000326197 MT1HP80294 61 aa4.03□□□□□ -1.76
SCMH1-201ENST00000326197 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
SCMH1-201ENST00000326197 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
SCMH1-201ENST00000326197 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
SCMH1-201ENST00000326197 INE1O15225 51 aa3.98□□□□□ -1.77
SCMH1-201ENST00000326197 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
SCMH1-201ENST00000326197 MT1XP80297 61 aa3.92□□□□□ -1.78
SCMH1-201ENST00000326197 KRTAP9-8Q9BYQ0 159 aa3.92□□□□□ -1.78
SCMH1-201ENST00000326197 KRTAP19-8Q3LI54 63 aa3.91□□□□□ -1.78
SCMH1-201ENST00000326197 MT1BP07438 61 aa3.9□□□□□ -1.78
SCMH1-201ENST00000326197 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
SCMH1-201ENST00000326197 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
SCMH1-201ENST00000326197 KRTAP19-5Q3LI72 72 aa3.78□□□□□ -1.8
SCMH1-201ENST00000326197 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
SCMH1-201ENST00000326197 KRTAP9-3Q9BYQ3 159 aa3.74□□□□□ -1.81
SCMH1-201ENST00000326197 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
SCMH1-201ENST00000326197 KMT2DO14686 5537 aa3.66□□□□□ -1.82
SCMH1-201ENST00000326197 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
SCMH1-201ENST00000326197 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
SCMH1-201ENST00000326197 KRTAP4-8Q9BYQ9 185 aa3.66□□□□□ -1.82
SCMH1-201ENST00000326197 FCGBPQ9Y6R7 5405 aaPredicted RBP3.6□□□□□ -1.83
SCMH1-201ENST00000326197 CRCT1Q9UGL9 99 aa3.59□□□□□ -1.83
SCMH1-201ENST00000326197 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.83
SCMH1-201ENST00000326197 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
SCMH1-201ENST00000326197 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
SCMH1-201ENST00000326197 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
SCMH1-201ENST00000326197 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms