RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 FAM236BA0A1B0GV22 79 aa7.71□□□□□ -1.18
LRRC42-201ENST00000319223 H3BPC8 53 aa7.69□□□□□ -1.18
LRRC42-201ENST00000319223 TRAV7A0A075B6U4 112 aa7.64□□□□□ -1.19
LRRC42-201ENST00000319223 A8MUN3 132 aa7.64□□□□□ -1.19
LRRC42-201ENST00000319223 SSPOA2VEC9 5147 aa7.61□□□□□ -1.19
LRRC42-201ENST00000319223 SMIM20Q8N5G0 67 aa7.6□□□□□ -1.19
LRRC42-201ENST00000319223 NDUFC1O43677 76 aa7.58□□□□□ -1.2
LRRC42-201ENST00000319223 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
LRRC42-201ENST00000319223 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
LRRC42-201ENST00000319223 SNURFQ9Y675 71 aa7.5□□□□□ -1.21
LRRC42-201ENST00000319223 SERP2Q8N6R1 65 aa7.47□□□□□ -1.21
LRRC42-201ENST00000319223 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
LRRC42-201ENST00000319223 H0YAA0 97 aa7.44□□□□□ -1.22
LRRC42-201ENST00000319223 KRTAP19-6Q3LI70 58 aa7.44□□□□□ -1.22
LRRC42-201ENST00000319223 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
LRRC42-201ENST00000319223 FCGBPQ9Y6R7 5405 aaPredicted RBP7.41□□□□□ -1.22
LRRC42-201ENST00000319223 ADM2Q7Z4H4 148 aa7.41□□□□□ -1.22
LRRC42-201ENST00000319223 MT1BP07438 61 aa7.4□□□□□ -1.23
LRRC42-201ENST00000319223 KRTAP19-8Q3LI54 63 aa7.4□□□□□ -1.23
LRRC42-201ENST00000319223 ACYP2P14621 99 aa7.38□□□□□ -1.23
LRRC42-201ENST00000319223 CRIPTQ9P021 101 aa7.36□□□□□ -1.23
LRRC42-201ENST00000319223 Q5VV11 94 aa7.34□□□□□ -1.23
LRRC42-201ENST00000319223 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.32□□□□□ -1.24
LRRC42-201ENST00000319223 P0C880 135 aa7.32□□□□□ -1.24
LRRC42-201ENST00000319223 COX7CP15954 63 aa7.3□□□□□ -1.24
LRRC42-201ENST00000319223 SPANXA2-OT1Q8N9U9 137 aa7.3□□□□□ -1.24
LRRC42-201ENST00000319223 KRTAP3-2Q9BYR7 98 aa7.3□□□□□ -1.24
LRRC42-201ENST00000319223 CHKB-CPT1BH3BT56 60 aa7.24□□□□□ -1.25
LRRC42-201ENST00000319223 CYSTM1Q9H1C7 97 aa7.24□□□□□ -1.25
LRRC42-201ENST00000319223 SPTSSBQ8NFR3 76 aa7.21□□□□□ -1.26
LRRC42-201ENST00000319223 R4GN34 69 aa7.18□□□□□ -1.26
LRRC42-201ENST00000319223 A6NN06 94 aa7.17□□□□□ -1.26
LRRC42-201ENST00000319223 H7BZZ5 65 aa7.16□□□□□ -1.26
LRRC42-201ENST00000319223 M0QZ58 72 aa7.15□□□□□ -1.26
LRRC42-201ENST00000319223 ANAPC13Q9BS18 74 aa7.15□□□□□ -1.26
LRRC42-201ENST00000319223 MACF1Q9UPN3 7388 aaKnown RBP7.15□□□□□ -1.26
LRRC42-201ENST00000319223 KRTAP9-7A8MTY7 169 aa7.15□□□□□ -1.27
LRRC42-201ENST00000319223 KRTAP10-5P60370 271 aa7.15□□□□□ -1.27
LRRC42-201ENST00000319223 COA5Q86WW8 74 aa7.12□□□□□ -1.27
LRRC42-201ENST00000319223 SYNE2Q8WXH0 6885 aaKnown RBP7.06□□□□□ -1.28
LRRC42-201ENST00000319223 CCDC179H3BU77 68 aa7.06□□□□□ -1.28
LRRC42-201ENST00000319223 LINC01554Q52M75 96 aa7.05□□□□□ -1.28
LRRC42-201ENST00000319223 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
LRRC42-201ENST00000319223 MT1XP80297 61 aa6.98□□□□□ -1.29
LRRC42-201ENST00000319223 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
LRRC42-201ENST00000319223 KRTAP6-3Q3LI67 103 aa6.9□□□□□ -1.3
LRRC42-201ENST00000319223 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.31
LRRC42-201ENST00000319223 SEC61GP60059 68 aa6.84□□□□□ -1.31
LRRC42-201ENST00000319223 SERP1Q9Y6X1 66 aa6.84□□□□□ -1.31
LRRC42-201ENST00000319223 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
LRRC42-201ENST00000319223 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
LRRC42-201ENST00000319223 A0A1B0GU33 70 aa6.76□□□□□ -1.33
LRRC42-201ENST00000319223 TMEM258P61165 79 aa6.73□□□□□ -1.33
LRRC42-201ENST00000319223 A0A1B0GU69 56 aa6.73□□□□□ -1.33
LRRC42-201ENST00000319223 A0A0D9SG42 100 aa6.72□□□□□ -1.33
LRRC42-201ENST00000319223 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
LRRC42-201ENST00000319223 KRTAP5-9P26371 169 aa6.69□□□□□ -1.34
LRRC42-201ENST00000319223 KRTAP10-7P60409 375 aaPredicted RBP6.68□□□□□ -1.34
LRRC42-201ENST00000319223 KMT2DO14686 5537 aa6.68□□□□□ -1.34
LRRC42-201ENST00000319223 PCP4P48539 62 aa6.67□□□□□ -1.34
LRRC42-201ENST00000319223 KRTAP4-8A0A0G2JLE6 195 aa6.64□□□□□ -1.35
LRRC42-201ENST00000319223 KRTAP4-8Q9BYQ9 185 aa6.64□□□□□ -1.35
LRRC42-201ENST00000319223 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
LRRC42-201ENST00000319223 KRTAP10-12P60413 245 aa6.62□□□□□ -1.35
LRRC42-201ENST00000319223 LINC01558Q9Y6Z2 57 aa6.61□□□□□ -1.35
LRRC42-201ENST00000319223 KRTAP12-1P59990 96 aa6.59□□□□□ -1.35
LRRC42-201ENST00000319223 SPINT4Q6UDR6 99 aa6.59□□□□□ -1.35
LRRC42-201ENST00000319223 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
LRRC42-201ENST00000319223 MUC12Q9UKN1 5478 aa6.58□□□□□ -1.36
LRRC42-201ENST00000319223 NEBP20929 6669 aa6.58□□□□□ -1.36
LRRC42-201ENST00000319223 A8MU10 97 aa6.57□□□□□ -1.36
LRRC42-201ENST00000319223 SPRR2FQ96RM1 72 aa6.56□□□□□ -1.36
LRRC42-201ENST00000319223 PRR15LQ9BU68 103 aa6.54□□□□□ -1.36
LRRC42-201ENST00000319223 SMIM26A0A096LP01 95 aa6.53□□□□□ -1.36
LRRC42-201ENST00000319223 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
LRRC42-201ENST00000319223 KRTAP4-6Q9BYQ5 205 aa6.5□□□□□ -1.37
LRRC42-201ENST00000319223 MDN1Q9NU22 5596 aa6.44□□□□□ -1.38
LRRC42-201ENST00000319223 SPRR2EP22531 72 aa6.4□□□□□ -1.38
LRRC42-201ENST00000319223 SPRR2BP35325 72 aa6.4□□□□□ -1.38
LRRC42-201ENST00000319223 SPRR2AP35326 72 aa6.4□□□□□ -1.38
LRRC42-201ENST00000319223 UQCR11O14957 56 aa6.37□□□□□ -1.39
LRRC42-201ENST00000319223 LCE1AQ5T7P2 110 aa6.37□□□□□ -1.39
LRRC42-201ENST00000319223 Q1T7F1 81 aa6.31□□□□□ -1.4
LRRC42-201ENST00000319223 PSPHP1O15172 72 aa6.3□□□□□ -1.4
LRRC42-201ENST00000319223 C10orf95Q9H7T3 257 aa6.3□□□□□ -1.4
LRRC42-201ENST00000319223 V9GYY9 64 aa6.29□□□□□ -1.4
LRRC42-201ENST00000319223 KRTAP20-1Q3LI63 56 aa6.28□□□□□ -1.4
LRRC42-201ENST00000319223 MIR22HGQ0VDD5 57 aa6.27□□□□□ -1.41
LRRC42-201ENST00000319223 KRTAP19-7Q3SYF9 63 aa6.25□□□□□ -1.41
LRRC42-201ENST00000319223 SPRR2DP22532 72 aa6.18□□□□□ -1.42
LRRC42-201ENST00000319223 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
LRRC42-201ENST00000319223 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
LRRC42-201ENST00000319223 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
LRRC42-201ENST00000319223 MT1EP04732 61 aa6.16□□□□□ -1.42
LRRC42-201ENST00000319223 TNP1P09430 55 aa6.16□□□□□ -1.42
LRRC42-201ENST00000319223 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.42
LRRC42-201ENST00000319223 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
LRRC42-201ENST00000319223 A6NED7 52 aa6.07□□□□□ -1.44
LRRC42-201ENST00000319223 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
LRRC42-201ENST00000319223 KRTAP19-3Q7Z4W3 81 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms