RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 RBM12B-AS1Q9P1G2 102 aa7.27□□□□□ -1.24
VAMP2-201ENST00000316509 UQCR11O14957 56 aa7.22□□□□□ -1.25
VAMP2-201ENST00000316509 DMBT1Q9UGM3 2413 aaPredicted RBP7.22□□□□□ -1.25
VAMP2-201ENST00000316509 SPATA8Q6RVD6 105 aa7.2□□□□□ -1.26
VAMP2-201ENST00000316509 HERC2O95714 4834 aa7.16□□□□□ -1.26
VAMP2-201ENST00000316509 MIR22HGQ0VDD5 57 aa7.15□□□□□ -1.27
VAMP2-201ENST00000316509 MYCBP2O75592 4640 aa7.13□□□□□ -1.27
VAMP2-201ENST00000316509 J3QL48 77 aa7.1□□□□□ -1.27
VAMP2-201ENST00000316509 ABCA13Q86UQ4 5058 aa7.1□□□□□ -1.27
VAMP2-201ENST00000316509 H1FX-AS1Q4G0G2 97 aa7.08□□□□□ -1.28
VAMP2-201ENST00000316509 S4R3F8 94 aa7.08□□□□□ -1.28
VAMP2-201ENST00000316509 SEC61BP60468 96 aaKnown RBP7.05□□□□□ -1.28
VAMP2-201ENST00000316509 A0A1B0GU33 70 aa7.05□□□□□ -1.28
VAMP2-201ENST00000316509 KRTAP3-3Q9BYR6 98 aa7.05□□□□□ -1.28
VAMP2-201ENST00000316509 PRAC1Q96KF2 57 aa7.02□□□□□ -1.29
VAMP2-201ENST00000316509 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
VAMP2-201ENST00000316509 PCLOQ9Y6V0 5065 aa6.97□□□□□ -1.29
VAMP2-201ENST00000316509 H0YAA0 97 aa6.93□□□□□ -1.3
VAMP2-201ENST00000316509 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
VAMP2-201ENST00000316509 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
VAMP2-201ENST00000316509 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
VAMP2-201ENST00000316509 LRP2P98164 4655 aa6.85□□□□□ -1.31
VAMP2-201ENST00000316509 LINC01554Q52M75 96 aa6.84□□□□□ -1.32
VAMP2-201ENST00000316509 K7ERS5 55 aa6.82□□□□□ -1.32
VAMP2-201ENST00000316509 LPAP08519 4548 aa6.8□□□□□ -1.32
VAMP2-201ENST00000316509 P0C880 135 aa6.76□□□□□ -1.33
VAMP2-201ENST00000316509 KRTAP4-1Q9BYQ7 146 aa6.75□□□□□ -1.33
VAMP2-201ENST00000316509 MUC17Q685J3 4493 aa6.75□□□□□ -1.33
VAMP2-201ENST00000316509 M0QZ58 72 aa6.73□□□□□ -1.33
VAMP2-201ENST00000316509 HERC1Q15751 4861 aa6.71□□□□□ -1.34
VAMP2-201ENST00000316509 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.34
VAMP2-201ENST00000316509 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
VAMP2-201ENST00000316509 A0A0D9SG42 100 aa6.62□□□□□ -1.35
VAMP2-201ENST00000316509 LCE2DQ5TA82 110 aaPredicted RBP6.58□□□□□ -1.36
VAMP2-201ENST00000316509 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
VAMP2-201ENST00000316509 H3BS24 57 aa6.58□□□□□ -1.36
VAMP2-201ENST00000316509 ROMO1P60602 79 aa6.55□□□□□ -1.36
VAMP2-201ENST00000316509 R4GN34 69 aa6.54□□□□□ -1.36
VAMP2-201ENST00000316509 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
VAMP2-201ENST00000316509 KRTAP12-1P59990 96 aa6.52□□□□□ -1.37
VAMP2-201ENST00000316509 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
VAMP2-201ENST00000316509 SPINT4Q6UDR6 99 aa6.48□□□□□ -1.37
VAMP2-201ENST00000316509 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
VAMP2-201ENST00000316509 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
VAMP2-201ENST00000316509 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
VAMP2-201ENST00000316509 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
VAMP2-201ENST00000316509 FLGP20930 4061 aaPredicted RBP6.38□□□□□ -1.39
VAMP2-201ENST00000316509 MUC2Q02817 5179 aa6.32□□□□□ -1.4
VAMP2-201ENST00000316509 RNF213Q63HN8 5207 aa6.24□□□□□ -1.41
VAMP2-201ENST00000316509 MT1HP80294 61 aa6.23□□□□□ -1.41
VAMP2-201ENST00000316509 M0R2T5 61 aa6.21□□□□□ -1.42
VAMP2-201ENST00000316509 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
VAMP2-201ENST00000316509 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
VAMP2-201ENST00000316509 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.43
VAMP2-201ENST00000316509 MT2AP02795 61 aa6.06□□□□□ -1.44
VAMP2-201ENST00000316509 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
VAMP2-201ENST00000316509 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
VAMP2-201ENST00000316509 FAT4Q6V0I7 4981 aa6.05□□□□□ -1.44
VAMP2-201ENST00000316509 PLAC4Q8WY50 150 aa6.05□□□□□ -1.44
VAMP2-201ENST00000316509 KRTAP10-10P60014 251 aa6.04□□□□□ -1.44
VAMP2-201ENST00000316509 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
VAMP2-201ENST00000316509 A0A0A0MQY5 61 aa6.03□□□□□ -1.44
VAMP2-201ENST00000316509 MT1FP04733 61 aa6.01□□□□□ -1.45
VAMP2-201ENST00000316509 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
VAMP2-201ENST00000316509 NDUFAF8A1L188 74 aa5.97□□□□□ -1.45
VAMP2-201ENST00000316509 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
VAMP2-201ENST00000316509 TNP1P09430 55 aa5.96□□□□□ -1.46
VAMP2-201ENST00000316509 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
VAMP2-201ENST00000316509 LCE2AQ5TA79 106 aaPredicted RBP5.93□□□□□ -1.46
VAMP2-201ENST00000316509 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
VAMP2-201ENST00000316509 MT1BP07438 61 aa5.79□□□□□ -1.48
VAMP2-201ENST00000316509 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
VAMP2-201ENST00000316509 MT1XP80297 61 aa5.67□□□□□ -1.5
VAMP2-201ENST00000316509 PRO2289Q9P1D8 64 aa5.66□□□□□ -1.5
VAMP2-201ENST00000316509 LCE2BO14633 110 aa5.57□□□□□ -1.52
VAMP2-201ENST00000316509 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
VAMP2-201ENST00000316509 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
VAMP2-201ENST00000316509 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
VAMP2-201ENST00000316509 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
VAMP2-201ENST00000316509 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
VAMP2-201ENST00000316509 LUZP6Q538Z0 58 aa5.42□□□□□ -1.54
VAMP2-201ENST00000316509 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
VAMP2-201ENST00000316509 KRTAP9-2Q9BYQ4 174 aa5.33□□□□□ -1.56
VAMP2-201ENST00000316509 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
VAMP2-201ENST00000316509 USH2AO75445 5202 aa5.29□□□□□ -1.56
VAMP2-201ENST00000316509 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
VAMP2-201ENST00000316509 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
VAMP2-201ENST00000316509 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
VAMP2-201ENST00000316509 SSPOA2VEC9 5147 aa5.14□□□□□ -1.59
VAMP2-201ENST00000316509 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
VAMP2-201ENST00000316509 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
VAMP2-201ENST00000316509 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
VAMP2-201ENST00000316509 KRTAP19-7Q3SYF9 63 aa5.06□□□□□ -1.6
VAMP2-201ENST00000316509 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
VAMP2-201ENST00000316509 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
VAMP2-201ENST00000316509 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.61
VAMP2-201ENST00000316509 MT1EP04732 61 aa4.96□□□□□ -1.62
VAMP2-201ENST00000316509 MT1LQ93083 61 aa4.91□□□□□ -1.62
VAMP2-201ENST00000316509 KMT2DO14686 5537 aa4.85□□□□□ -1.63
VAMP2-201ENST00000316509 MACF1Q9UPN3 7388 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms