RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 UQCR11O14957 56 aa7.66□□□□□ -1.18
CLK4-201ENST00000316308 KRTAP4-5Q9BYR2 181 aa7.65□□□□□ -1.18
CLK4-201ENST00000316308 COX6B2Q6YFQ2 88 aa7.65□□□□□ -1.18
CLK4-201ENST00000316308 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
CLK4-201ENST00000316308 KTN1-AS1Q86SY8 53 aa7.63□□□□□ -1.19
CLK4-201ENST00000316308 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
CLK4-201ENST00000316308 H0YAA0 97 aa7.59□□□□□ -1.2
CLK4-201ENST00000316308 SEC61GP60059 68 aa7.57□□□□□ -1.2
CLK4-201ENST00000316308 KRTAP3-3Q9BYR6 98 aa7.57□□□□□ -1.2
CLK4-201ENST00000316308 PRAC1Q96KF2 57 aa7.55□□□□□ -1.2
CLK4-201ENST00000316308 A0A1B0GU33 70 aa7.5□□□□□ -1.21
CLK4-201ENST00000316308 H1FX-AS1Q4G0G2 97 aa7.47□□□□□ -1.21
CLK4-201ENST00000316308 RBM12B-AS1Q9P1G2 102 aa7.46□□□□□ -1.22
CLK4-201ENST00000316308 HERC2O95714 4834 aa7.45□□□□□ -1.22
CLK4-201ENST00000316308 KRTAP10-6P60371 365 aaPredicted RBP7.43□□□□□ -1.22
CLK4-201ENST00000316308 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.22
CLK4-201ENST00000316308 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.23
CLK4-201ENST00000316308 S4R3F8 94 aa7.4□□□□□ -1.23
CLK4-201ENST00000316308 MUC2Q02817 5179 aa7.37□□□□□ -1.23
CLK4-201ENST00000316308 TPRXLQ17RH7 258 aa7.37□□□□□ -1.23
CLK4-201ENST00000316308 P0C880 135 aa7.36□□□□□ -1.23
CLK4-201ENST00000316308 MUC17Q685J3 4493 aa7.33□□□□□ -1.24
CLK4-201ENST00000316308 A0A0D9SG42 100 aa7.3□□□□□ -1.24
CLK4-201ENST00000316308 CSAG1Q6PB30 78 aa7.27□□□□□ -1.25
CLK4-201ENST00000316308 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
CLK4-201ENST00000316308 HERC1Q15751 4861 aa7.23□□□□□ -1.25
CLK4-201ENST00000316308 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
CLK4-201ENST00000316308 BIRC6Q9NR09 4857 aa7.19□□□□□ -1.26
CLK4-201ENST00000316308 PCLOQ9Y6V0 5065 aa7.18□□□□□ -1.26
CLK4-201ENST00000316308 J3QL48 77 aa7.16□□□□□ -1.26
CLK4-201ENST00000316308 KRTAP12-2P59991 146 aa7.11□□□□□ -1.27
CLK4-201ENST00000316308 K7ERS5 55 aa7.06□□□□□ -1.28
CLK4-201ENST00000316308 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
CLK4-201ENST00000316308 SEC61BP60468 96 aaKnown RBP7.05□□□□□ -1.28
CLK4-201ENST00000316308 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
CLK4-201ENST00000316308 KRTAP19-2Q3LHN2 52 aa7.03□□□□□ -1.28
CLK4-201ENST00000316308 KRTAP25-1Q3LHN0 102 aa7.02□□□□□ -1.29
CLK4-201ENST00000316308 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
CLK4-201ENST00000316308 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
CLK4-201ENST00000316308 HMCN2Q8NDA2 5059 aa7□□□□□ -1.29
CLK4-201ENST00000316308 FAT4Q6V0I7 4981 aa7□□□□□ -1.29
CLK4-201ENST00000316308 ROMO1P60602 79 aa6.99□□□□□ -1.29
CLK4-201ENST00000316308 C10orf95Q9H7T3 257 aa6.95□□□□□ -1.3
CLK4-201ENST00000316308 M0QZ58 72 aa6.93□□□□□ -1.3
CLK4-201ENST00000316308 FLGP20930 4061 aaPredicted RBP6.92□□□□□ -1.3
CLK4-201ENST00000316308 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
CLK4-201ENST00000316308 R4GN34 69 aa6.87□□□□□ -1.31
CLK4-201ENST00000316308 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
CLK4-201ENST00000316308 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
CLK4-201ENST00000316308 CAMK2N1Q7Z7J9 78 aa6.49□□□□□ -1.37
CLK4-201ENST00000316308 MT1HP80294 61 aa6.48□□□□□ -1.37
CLK4-201ENST00000316308 M0R2T5 61 aa6.45□□□□□ -1.38
CLK4-201ENST00000316308 KRTAP19-1Q8IUB9 90 aa6.4□□□□□ -1.38
CLK4-201ENST00000316308 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
CLK4-201ENST00000316308 MT1FP04733 61 aa6.37□□□□□ -1.39
CLK4-201ENST00000316308 MT2AP02795 61 aa6.33□□□□□ -1.4
CLK4-201ENST00000316308 SPRR2GQ9BYE4 73 aa6.32□□□□□ -1.4
CLK4-201ENST00000316308 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
CLK4-201ENST00000316308 KRTAP10-10P60014 251 aa6.29□□□□□ -1.4
CLK4-201ENST00000316308 H3BS24 57 aa6.24□□□□□ -1.41
CLK4-201ENST00000316308 NDUFAF8A1L188 74 aa6.2□□□□□ -1.42
CLK4-201ENST00000316308 PLAC4Q8WY50 150 aa6.18□□□□□ -1.42
CLK4-201ENST00000316308 TNP1P09430 55 aa6.18□□□□□ -1.42
CLK4-201ENST00000316308 USH2AO75445 5202 aa6.14□□□□□ -1.43
CLK4-201ENST00000316308 PP632Q6XCG6 107 aa6.11□□□□□ -1.43
CLK4-201ENST00000316308 MT1BP07438 61 aa6.1□□□□□ -1.43
CLK4-201ENST00000316308 KRTAP19-8Q3LI54 63 aa6.05□□□□□ -1.44
CLK4-201ENST00000316308 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
CLK4-201ENST00000316308 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
CLK4-201ENST00000316308 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
CLK4-201ENST00000316308 MT1XP80297 61 aa6.01□□□□□ -1.45
CLK4-201ENST00000316308 LCE2DQ5TA82 110 aaPredicted RBP6.01□□□□□ -1.45
CLK4-201ENST00000316308 KMT2DO14686 5537 aa5.94□□□□□ -1.46
CLK4-201ENST00000316308 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
CLK4-201ENST00000316308 LCE2BO14633 110 aa5.9□□□□□ -1.47
CLK4-201ENST00000316308 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
CLK4-201ENST00000316308 LCE2AQ5TA79 106 aaPredicted RBP5.83□□□□□ -1.48
CLK4-201ENST00000316308 KRTAP10-12P60413 245 aa5.77□□□□□ -1.49
CLK4-201ENST00000316308 KRTAP8-1Q8IUC2 63 aa5.76□□□□□ -1.49
CLK4-201ENST00000316308 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
CLK4-201ENST00000316308 LUZP6Q538Z0 58 aa5.73□□□□□ -1.49
CLK4-201ENST00000316308 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
CLK4-201ENST00000316308 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
CLK4-201ENST00000316308 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
CLK4-201ENST00000316308 KRTAP4-8Q9BYQ9 185 aa5.63□□□□□ -1.51
CLK4-201ENST00000316308 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
CLK4-201ENST00000316308 SSPOA2VEC9 5147 aa5.59□□□□□ -1.51
CLK4-201ENST00000316308 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
CLK4-201ENST00000316308 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
CLK4-201ENST00000316308 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
CLK4-201ENST00000316308 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
CLK4-201ENST00000316308 FCGBPQ9Y6R7 5405 aaPredicted RBP5.3□□□□□ -1.56
CLK4-201ENST00000316308 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
CLK4-201ENST00000316308 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
CLK4-201ENST00000316308 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
CLK4-201ENST00000316308 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
CLK4-201ENST00000316308 MT1EP04732 61 aa5.18□□□□□ -1.58
CLK4-201ENST00000316308 MT1LQ93083 61 aa5.16□□□□□ -1.58
CLK4-201ENST00000316308 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
CLK4-201ENST00000316308 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms