RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 Q5VV11 94 aa3.58□□□□□ -1.84
LYSMD3-201ENST00000315948 BRK1Q8WUW1 75 aa3.55□□□□□ -1.84
LYSMD3-201ENST00000315948 COX6B2Q6YFQ2 88 aa3.54□□□□□ -1.84
LYSMD3-201ENST00000315948 LCA10Q71F78 164 aa3.53□□□□□ -1.85
LYSMD3-201ENST00000315948 KRTAP3-3Q9BYR6 98 aa3.52□□□□□ -1.85
LYSMD3-201ENST00000315948 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
LYSMD3-201ENST00000315948 A6NED7 52 aa3.48□□□□□ -1.85
LYSMD3-201ENST00000315948 A0A1B0GU69 56 aa3.47□□□□□ -1.85
LYSMD3-201ENST00000315948 V9GYY9 64 aa3.45□□□□□ -1.86
LYSMD3-201ENST00000315948 S4R3F8 94 aa3.44□□□□□ -1.86
LYSMD3-201ENST00000315948 FLGP20930 4061 aaPredicted RBP3.43□□□□□ -1.86
LYSMD3-201ENST00000315948 SEC61BP60468 96 aaKnown RBP3.43□□□□□ -1.86
LYSMD3-201ENST00000315948 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
LYSMD3-201ENST00000315948 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
LYSMD3-201ENST00000315948 SPTSSBQ8NFR3 76 aa3.43□□□□□ -1.86
LYSMD3-201ENST00000315948 P0C880 135 aa3.42□□□□□ -1.86
LYSMD3-201ENST00000315948 H1FX-AS1Q4G0G2 97 aa3.42□□□□□ -1.86
LYSMD3-201ENST00000315948 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
LYSMD3-201ENST00000315948 RBM12B-AS1Q9P1G2 102 aa3.41□□□□□ -1.86
LYSMD3-201ENST00000315948 KRTAP3-2Q9BYR7 98 aa3.4□□□□□ -1.86
LYSMD3-201ENST00000315948 KRTAP13-4Q3LI77 160 aa3.4□□□□□ -1.87
LYSMD3-201ENST00000315948 H0YAA0 97 aa3.39□□□□□ -1.87
LYSMD3-201ENST00000315948 PRO0628Q9UI54 55 aa3.39□□□□□ -1.87
LYSMD3-201ENST00000315948 LCE2DQ5TA82 110 aaPredicted RBP3.38□□□□□ -1.87
LYSMD3-201ENST00000315948 ADM2Q7Z4H4 148 aa3.37□□□□□ -1.87
LYSMD3-201ENST00000315948 LORP23490 312 aaPredicted RBP3.36□□□□□ -1.87
LYSMD3-201ENST00000315948 SEC61GP60059 68 aa3.36□□□□□ -1.87
LYSMD3-201ENST00000315948 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
LYSMD3-201ENST00000315948 A0A1B0GU33 70 aa3.36□□□□□ -1.87
LYSMD3-201ENST00000315948 A0A0D9SG42 100 aa3.35□□□□□ -1.87
LYSMD3-201ENST00000315948 MIR22HGQ0VDD5 57 aa3.35□□□□□ -1.87
LYSMD3-201ENST00000315948 UQCR11O14957 56 aa3.35□□□□□ -1.87
LYSMD3-201ENST00000315948 LCE2CQ5TA81 110 aa3.34□□□□□ -1.88
LYSMD3-201ENST00000315948 CSAG1Q6PB30 78 aa3.33□□□□□ -1.88
LYSMD3-201ENST00000315948 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
LYSMD3-201ENST00000315948 LINC01554Q52M75 96 aa3.28□□□□□ -1.88
LYSMD3-201ENST00000315948 A6NN06 94 aa3.27□□□□□ -1.89
LYSMD3-201ENST00000315948 USH2AO75445 5202 aa3.25□□□□□ -1.89
LYSMD3-201ENST00000315948 MT1HP80294 61 aa3.24□□□□□ -1.89
LYSMD3-201ENST00000315948 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
LYSMD3-201ENST00000315948 SVIPQ8NHG7 77 aa3.24□□□□□ -1.89
LYSMD3-201ENST00000315948 M0QZ58 72 aa3.23□□□□□ -1.89
LYSMD3-201ENST00000315948 M0R2T5 61 aa3.23□□□□□ -1.89
LYSMD3-201ENST00000315948 PRAC1Q96KF2 57 aa3.23□□□□□ -1.89
LYSMD3-201ENST00000315948 CRIPTQ9P021 101 aa3.22□□□□□ -1.89
LYSMD3-201ENST00000315948 SPINT4Q6UDR6 99 aa3.21□□□□□ -1.9
LYSMD3-201ENST00000315948 R4GN34 69 aa3.2□□□□□ -1.9
LYSMD3-201ENST00000315948 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
LYSMD3-201ENST00000315948 FSIP2Q5CZC0 6907 aa3.17□□□□□ -1.9
LYSMD3-201ENST00000315948 MT1FP04733 61 aa3.16□□□□□ -1.9
LYSMD3-201ENST00000315948 KRTAP9-8Q9BYQ0 159 aa3.14□□□□□ -1.91
LYSMD3-201ENST00000315948 MT2AP02795 61 aa3.14□□□□□ -1.91
LYSMD3-201ENST00000315948 KTN1-AS1Q86SY8 53 aa3.13□□□□□ -1.91
LYSMD3-201ENST00000315948 KRTAP10-10P60014 251 aa3.11□□□□□ -1.91
LYSMD3-201ENST00000315948 KRTAP19-1Q8IUB9 90 aa3.1□□□□□ -1.91
LYSMD3-201ENST00000315948 C10orf95Q9H7T3 257 aa3.1□□□□□ -1.91
LYSMD3-201ENST00000315948 K7ERS5 55 aa3.07□□□□□ -1.92
LYSMD3-201ENST00000315948 ROMO1P60602 79 aa3.05□□□□□ -1.92
LYSMD3-201ENST00000315948 KMT2DO14686 5537 aa3.04□□□□□ -1.92
LYSMD3-201ENST00000315948 LCE2AQ5TA79 106 aaPredicted RBP3.03□□□□□ -1.92
LYSMD3-201ENST00000315948 SPRR2GQ9BYE4 73 aa3.02□□□□□ -1.93
LYSMD3-201ENST00000315948 CAMK2N1Q7Z7J9 78 aa3.02□□□□□ -1.93
LYSMD3-201ENST00000315948 KRTAP9-3Q9BYQ3 159 aa3.01□□□□□ -1.93
LYSMD3-201ENST00000315948 LCE2BO14633 110 aa2.98□□□□□ -1.93
LYSMD3-201ENST00000315948 MT1BP07438 61 aa2.97□□□□□ -1.93
LYSMD3-201ENST00000315948 KRTAP25-1Q3LHN0 102 aa2.97□□□□□ -1.93
LYSMD3-201ENST00000315948 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
LYSMD3-201ENST00000315948 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
LYSMD3-201ENST00000315948 KRTAP19-8Q3LI54 63 aa2.91□□□□□ -1.94
LYSMD3-201ENST00000315948 MT1XP80297 61 aa2.9□□□□□ -1.94
LYSMD3-201ENST00000315948 KRTAP10-5P60370 271 aa2.9□□□□□ -1.95
LYSMD3-201ENST00000315948 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
LYSMD3-201ENST00000315948 LOC100996750A0A140TA64 210 aa2.84□□□□□ -1.96
LYSMD3-201ENST00000315948 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.96
LYSMD3-201ENST00000315948 TNP1P09430 55 aa2.82□□□□□ -1.96
LYSMD3-201ENST00000315948 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
LYSMD3-201ENST00000315948 KRTAP4-8A0A0G2JLE6 195 aa2.79□□□□□ -1.96
LYSMD3-201ENST00000315948 KRTAP4-8Q9BYQ9 185 aa2.79□□□□□ -1.96
LYSMD3-201ENST00000315948 FCGBPQ9Y6R7 5405 aaPredicted RBP2.78□□□□□ -1.96
LYSMD3-201ENST00000315948 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
LYSMD3-201ENST00000315948 KRTAP10-12P60413 245 aa2.73□□□□□ -1.97
LYSMD3-201ENST00000315948 PRO2289Q9P1D8 64 aa2.69□□□□□ -1.98
LYSMD3-201ENST00000315948 SYNE2Q8WXH0 6885 aaKnown RBP2.69□□□□□ -1.98
LYSMD3-201ENST00000315948 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
LYSMD3-201ENST00000315948 KRTAP15-1Q3LI76 137 aa2.67□□□□□ -1.98
LYSMD3-201ENST00000315948 PP632Q6XCG6 107 aa2.67□□□□□ -1.98
LYSMD3-201ENST00000315948 KRTAP9-2Q9BYQ4 174 aa2.66□□□□□ -1.98
LYSMD3-201ENST00000315948 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
LYSMD3-201ENST00000315948 KRTAP19-6Q3LI70 58 aa2.64□□□□□ -1.99
LYSMD3-201ENST00000315948 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
LYSMD3-201ENST00000315948 KRTAP12-3P60328 96 aa2.64□□□□□ -1.99
LYSMD3-201ENST00000315948 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
LYSMD3-201ENST00000315948 MDN1Q9NU22 5596 aa2.61□□□□□ -1.99
LYSMD3-201ENST00000315948 KRTAP23-1A1A580 65 aa2.59□□□□□ -1.99
LYSMD3-201ENST00000315948 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -1.99
LYSMD3-201ENST00000315948 KRTAP4-7Q9BYR0 210 aa2.59□□□□□ -1.99
LYSMD3-201ENST00000315948 NDUFAF8A1L188 74 aa2.57□□□□□ -2
LYSMD3-201ENST00000315948 CRCT1Q9UGL9 99 aa2.56□□□□□ -2
LYSMD3-201ENST00000315948 MT1EP04732 61 aa2.51□□□□□ -2.01
LYSMD3-201ENST00000315948 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms