RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 KRTAP3-1Q9BYR8 98 aa10.05□□□□□ -0.8
CD55-201ENST00000314754 LINC01554Q52M75 96 aa10□□□□□ -0.81
CD55-201ENST00000314754 ABCA13Q86UQ4 5058 aa9.99□□□□□ -0.81
CD55-201ENST00000314754 COX6B2Q6YFQ2 88 aa9.98□□□□□ -0.81
CD55-201ENST00000314754 KRTAP4-5Q9BYR2 181 aa9.98□□□□□ -0.81
CD55-201ENST00000314754 ADM2Q7Z4H4 148 aa9.98□□□□□ -0.81
CD55-201ENST00000314754 MIR22HGQ0VDD5 57 aa9.92□□□□□ -0.82
CD55-201ENST00000314754 UQCR11O14957 56 aa9.91□□□□□ -0.82
CD55-201ENST00000314754 LRP2P98164 4655 aa9.86□□□□□ -0.83
CD55-201ENST00000314754 TPRXLQ17RH7 258 aa9.86□□□□□ -0.83
CD55-201ENST00000314754 LPAP08519 4548 aa9.85□□□□□ -0.83
CD55-201ENST00000314754 CSAG1Q6PB30 78 aa9.74□□□□□ -0.85
CD55-201ENST00000314754 HERC2O95714 4834 aa9.72□□□□□ -0.85
CD55-201ENST00000314754 H3BS24 57 aa9.68□□□□□ -0.86
CD55-201ENST00000314754 KRTAP3-3Q9BYR6 98 aa9.66□□□□□ -0.86
CD55-201ENST00000314754 BIRC6Q9NR09 4857 aa9.65□□□□□ -0.86
CD55-201ENST00000314754 S4R3F8 94 aa9.64□□□□□ -0.87
CD55-201ENST00000314754 A0A1B0GU33 70 aa9.63□□□□□ -0.87
CD55-201ENST00000314754 H1FX-AS1Q4G0G2 97 aa9.6□□□□□ -0.87
CD55-201ENST00000314754 J3QL48 77 aa9.59□□□□□ -0.87
CD55-201ENST00000314754 H0YAA0 97 aa9.58□□□□□ -0.88
CD55-201ENST00000314754 SEC61BP60468 96 aaKnown RBP9.5□□□□□ -0.89
CD55-201ENST00000314754 KRTAP25-1Q3LHN0 102 aa9.48□□□□□ -0.89
CD55-201ENST00000314754 KRTAP10-6P60371 365 aaPredicted RBP9.47□□□□□ -0.89
CD55-201ENST00000314754 MUC17Q685J3 4493 aa9.46□□□□□ -0.9
CD55-201ENST00000314754 KRTAP3-2Q9BYR7 98 aa9.44□□□□□ -0.9
CD55-201ENST00000314754 PCLOQ9Y6V0 5065 aa9.41□□□□□ -0.9
CD55-201ENST00000314754 ROMO1P60602 79 aa9.36□□□□□ -0.91
CD55-201ENST00000314754 KRTAP4-1Q9BYQ7 146 aa9.36□□□□□ -0.91
CD55-201ENST00000314754 P0C880 135 aa9.32□□□□□ -0.92
CD55-201ENST00000314754 HERC1Q15751 4861 aa9.3□□□□□ -0.92
CD55-201ENST00000314754 KRTAP13-4Q3LI77 160 aa9.3□□□□□ -0.92
CD55-201ENST00000314754 K7ERS5 55 aa9.24□□□□□ -0.93
CD55-201ENST00000314754 MUC2Q02817 5179 aa9.23□□□□□ -0.93
CD55-201ENST00000314754 HMCN2Q8NDA2 5059 aa9.19□□□□□ -0.94
CD55-201ENST00000314754 A0A0D9SG42 100 aa9.16□□□□□ -0.94
CD55-201ENST00000314754 KRTAP19-2Q3LHN2 52 aa9.13□□□□□ -0.95
CD55-201ENST00000314754 M0QZ58 72 aa9.09□□□□□ -0.95
CD55-201ENST00000314754 CRIPTQ9P021 101 aa9.02□□□□□ -0.97
CD55-201ENST00000314754 FLGP20930 4061 aaPredicted RBP8.96□□□□□ -0.97
CD55-201ENST00000314754 KRTAP12-2P59991 146 aa8.96□□□□□ -0.97
CD55-201ENST00000314754 KRTAP12-1P59990 96 aa8.95□□□□□ -0.98
CD55-201ENST00000314754 R4GN34 69 aa8.93□□□□□ -0.98
CD55-201ENST00000314754 LORP23490 312 aaPredicted RBP8.9□□□□□ -0.98
CD55-201ENST00000314754 SPINT4Q6UDR6 99 aa8.9□□□□□ -0.98
CD55-201ENST00000314754 LCE2DQ5TA82 110 aaPredicted RBP8.87□□□□□ -0.99
CD55-201ENST00000314754 UBR4Q5T4S7 5183 aa8.83□□□□□ -1
CD55-201ENST00000314754 RNF213Q63HN8 5207 aa8.81□□□□□ -1
CD55-201ENST00000314754 FAT4Q6V0I7 4981 aa8.8□□□□□ -1
CD55-201ENST00000314754 KRTAP15-1Q3LI76 137 aa8.77□□□□□ -1.01
CD55-201ENST00000314754 LCE2CQ5TA81 110 aa8.73□□□□□ -1.01
CD55-201ENST00000314754 C10orf95Q9H7T3 257 aa8.68□□□□□ -1.02
CD55-201ENST00000314754 NDUFAF8A1L188 74 aa8.65□□□□□ -1.03
CD55-201ENST00000314754 MT1HP80294 61 aa8.5□□□□□ -1.05
CD55-201ENST00000314754 M0R2T5 61 aa8.48□□□□□ -1.05
CD55-201ENST00000314754 CAMK2N1Q7Z7J9 78 aa8.42□□□□□ -1.06
CD55-201ENST00000314754 SPRR2GQ9BYE4 73 aa8.36□□□□□ -1.07
CD55-201ENST00000314754 KRTAP19-1Q8IUB9 90 aa8.3□□□□□ -1.08
CD55-201ENST00000314754 MT2AP02795 61 aa8.28□□□□□ -1.08
CD55-201ENST00000314754 MT1FP04733 61 aa8.28□□□□□ -1.08
CD55-201ENST00000314754 KRTAP9-8Q9BYQ0 159 aa8.26□□□□□ -1.09
CD55-201ENST00000314754 KRTAP10-10P60014 251 aa8.25□□□□□ -1.09
CD55-201ENST00000314754 PLAC4Q8WY50 150 aa8.18□□□□□ -1.1
CD55-201ENST00000314754 PP632Q6XCG6 107 aa8.11□□□□□ -1.11
CD55-201ENST00000314754 TNP1P09430 55 aa8.08□□□□□ -1.12
CD55-201ENST00000314754 KRTAP19-8Q3LI54 63 aa8.05□□□□□ -1.12
CD55-201ENST00000314754 A0A0A0MQY5 61 aa8.03□□□□□ -1.12
CD55-201ENST00000314754 LUZP6Q538Z0 58 aa8□□□□□ -1.13
CD55-201ENST00000314754 KRTAP23-1A1A580 65 aa7.96□□□□□ -1.14
CD55-201ENST00000314754 KRTAP9-3Q9BYQ3 159 aa7.94□□□□□ -1.14
CD55-201ENST00000314754 MT1BP07438 61 aa7.92□□□□□ -1.14
CD55-201ENST00000314754 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
CD55-201ENST00000314754 MT1XP80297 61 aa7.78□□□□□ -1.16
CD55-201ENST00000314754 KRTAP10-5P60370 271 aa7.78□□□□□ -1.16
CD55-201ENST00000314754 LCE2BO14633 110 aa7.68□□□□□ -1.18
CD55-201ENST00000314754 LCE3AQ5TA76 89 aa7.67□□□□□ -1.18
CD55-201ENST00000314754 USH2AO75445 5202 aa7.66□□□□□ -1.18
CD55-201ENST00000314754 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
CD55-201ENST00000314754 SPRR5A0A1B0GTR4 108 aa7.59□□□□□ -1.19
CD55-201ENST00000314754 KRTAP10-7P60409 375 aaPredicted RBP7.53□□□□□ -1.2
CD55-201ENST00000314754 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
CD55-201ENST00000314754 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.2
CD55-201ENST00000314754 LOC100996750A0A140TA64 210 aa7.46□□□□□ -1.22
CD55-201ENST00000314754 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
CD55-201ENST00000314754 KRTAP12-3P60328 96 aa7.35□□□□□ -1.23
CD55-201ENST00000314754 KMT2DO14686 5537 aa7.35□□□□□ -1.23
CD55-201ENST00000314754 SSPOA2VEC9 5147 aa7.26□□□□□ -1.25
CD55-201ENST00000314754 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
CD55-201ENST00000314754 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
CD55-201ENST00000314754 FSIP2Q5CZC0 6907 aa7.16□□□□□ -1.26
CD55-201ENST00000314754 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
CD55-201ENST00000314754 INE1O15225 51 aa7.07□□□□□ -1.28
CD55-201ENST00000314754 KRTAP19-6Q3LI70 58 aa7.04□□□□□ -1.28
CD55-201ENST00000314754 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
CD55-201ENST00000314754 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
CD55-201ENST00000314754 FCGBPQ9Y6R7 5405 aaPredicted RBP6.81□□□□□ -1.32
CD55-201ENST00000314754 MT1EP04732 61 aa6.77□□□□□ -1.33
CD55-201ENST00000314754 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
CD55-201ENST00000314754 MT1LQ93083 61 aa6.71□□□□□ -1.34
CD55-201ENST00000314754 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms