RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 H0YAA0 97 aa5.08□□□□□ -1.6
LSMEM1-201ENST00000312849 PKHD1L1Q86WI1 4243 aa5.08□□□□□ -1.6
LSMEM1-201ENST00000312849 FLG2Q5D862 2391 aaPredicted RBP5.07□□□□□ -1.6
LSMEM1-201ENST00000312849 ADM2Q7Z4H4 148 aa5.07□□□□□ -1.6
LSMEM1-201ENST00000312849 PKHD1P08F94 4074 aa5.05□□□□□ -1.6
LSMEM1-201ENST00000312849 RPL37P61927 97 aaKnown RBP5.05□□□□□ -1.6
LSMEM1-201ENST00000312849 DYNC1H1Q14204 4646 aaKnown RBP5.04□□□□□ -1.6
LSMEM1-201ENST00000312849 APOBP04114 4563 aaKnown RBP5.03□□□□□ -1.6
LSMEM1-201ENST00000312849 KRTAP17-1Q9BYP8 105 aa5.03□□□□□ -1.6
LSMEM1-201ENST00000312849 K7ERS5 55 aa5.01□□□□□ -1.61
LSMEM1-201ENST00000312849 LINC01554Q52M75 96 aa5.01□□□□□ -1.61
LSMEM1-201ENST00000312849 Q5VSD8 79 aa5.01□□□□□ -1.61
LSMEM1-201ENST00000312849 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
LSMEM1-201ENST00000312849 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
LSMEM1-201ENST00000312849 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
LSMEM1-201ENST00000312849 CSAG1Q6PB30 78 aa4.99□□□□□ -1.61
LSMEM1-201ENST00000312849 S4R3F8 94 aa4.95□□□□□ -1.62
LSMEM1-201ENST00000312849 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
LSMEM1-201ENST00000312849 FAT1Q14517 4588 aa4.91□□□□□ -1.62
LSMEM1-201ENST00000312849 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.62
LSMEM1-201ENST00000312849 RYR2Q92736 4967 aa4.88□□□□□ -1.63
LSMEM1-201ENST00000312849 MT1HL1P0DM35 61 aa4.88□□□□□ -1.63
LSMEM1-201ENST00000312849 TNXBP22105 4242 aa4.87□□□□□ -1.63
LSMEM1-201ENST00000312849 ROMO1P60602 79 aa4.85□□□□□ -1.63
LSMEM1-201ENST00000312849 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
LSMEM1-201ENST00000312849 FAT3Q8TDW7 4589 aa4.84□□□□□ -1.63
LSMEM1-201ENST00000312849 DMBT1Q9UGM3 2413 aaPredicted RBP4.84□□□□□ -1.64
LSMEM1-201ENST00000312849 TPRXLQ17RH7 258 aa4.83□□□□□ -1.64
LSMEM1-201ENST00000312849 KRTAP13-4Q3LI77 160 aa4.82□□□□□ -1.64
LSMEM1-201ENST00000312849 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
LSMEM1-201ENST00000312849 A0A0D9SG42 100 aa4.79□□□□□ -1.64
LSMEM1-201ENST00000312849 P0C880 135 aa4.79□□□□□ -1.64
LSMEM1-201ENST00000312849 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
LSMEM1-201ENST00000312849 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
LSMEM1-201ENST00000312849 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
LSMEM1-201ENST00000312849 HSPG2P98160 4391 aa4.77□□□□□ -1.65
LSMEM1-201ENST00000312849 LRP1Q07954 4544 aaKnown RBP4.76□□□□□ -1.65
LSMEM1-201ENST00000312849 M0QZ58 72 aa4.75□□□□□ -1.65
LSMEM1-201ENST00000312849 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
LSMEM1-201ENST00000312849 RYR1P21817 5038 aa4.71□□□□□ -1.66
LSMEM1-201ENST00000312849 CRIPTQ9P021 101 aa4.71□□□□□ -1.66
LSMEM1-201ENST00000312849 KMT2CQ8NEZ4 4911 aaKnown RBP4.7□□□□□ -1.66
LSMEM1-201ENST00000312849 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
LSMEM1-201ENST00000312849 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
LSMEM1-201ENST00000312849 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
LSMEM1-201ENST00000312849 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
LSMEM1-201ENST00000312849 MYCBP2O75592 4640 aa4.58□□□□□ -1.68
LSMEM1-201ENST00000312849 R4GN34 69 aa4.58□□□□□ -1.68
LSMEM1-201ENST00000312849 KRTAP4-5Q9BYR2 181 aa4.56□□□□□ -1.68
LSMEM1-201ENST00000312849 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
LSMEM1-201ENST00000312849 KIAA1109Q2LD37 5005 aa4.56□□□□□ -1.68
LSMEM1-201ENST00000312849 RYR3Q15413 4870 aa4.55□□□□□ -1.68
LSMEM1-201ENST00000312849 LRP2P98164 4655 aa4.5□□□□□ -1.69
LSMEM1-201ENST00000312849 H3BS24 57 aa4.5□□□□□ -1.69
LSMEM1-201ENST00000312849 KRTAP4-1Q9BYQ7 146 aa4.49□□□□□ -1.69
LSMEM1-201ENST00000312849 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
LSMEM1-201ENST00000312849 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
LSMEM1-201ENST00000312849 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
LSMEM1-201ENST00000312849 LPAP08519 4548 aa4.43□□□□□ -1.7
LSMEM1-201ENST00000312849 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
LSMEM1-201ENST00000312849 MUC17Q685J3 4493 aa4.39□□□□□ -1.71
LSMEM1-201ENST00000312849 EPPK1P58107 5090 aaKnown RBP4.38□□□□□ -1.71
LSMEM1-201ENST00000312849 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
LSMEM1-201ENST00000312849 ABCA13Q86UQ4 5058 aa4.35□□□□□ -1.71
LSMEM1-201ENST00000312849 CAMK2N1Q7Z7J9 78 aa4.35□□□□□ -1.71
LSMEM1-201ENST00000312849 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
LSMEM1-201ENST00000312849 PLAC4Q8WY50 150 aa4.28□□□□□ -1.72
LSMEM1-201ENST00000312849 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
LSMEM1-201ENST00000312849 TNP1P09430 55 aa4.22□□□□□ -1.73
LSMEM1-201ENST00000312849 FLGP20930 4061 aaPredicted RBP4.21□□□□□ -1.74
LSMEM1-201ENST00000312849 HERC2O95714 4834 aa4.19□□□□□ -1.74
LSMEM1-201ENST00000312849 BIRC6Q9NR09 4857 aa4.17□□□□□ -1.74
LSMEM1-201ENST00000312849 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
LSMEM1-201ENST00000312849 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
LSMEM1-201ENST00000312849 HERC1Q15751 4861 aa4.11□□□□□ -1.75
LSMEM1-201ENST00000312849 M0R2T5 61 aa4.09□□□□□ -1.75
LSMEM1-201ENST00000312849 MT1HP80294 61 aa4.07□□□□□ -1.76
LSMEM1-201ENST00000312849 KRTAP10-10P60014 251 aa4.02□□□□□ -1.77
LSMEM1-201ENST00000312849 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
LSMEM1-201ENST00000312849 MT2AP02795 61 aa4.01□□□□□ -1.77
LSMEM1-201ENST00000312849 MT1FP04733 61 aa3.99□□□□□ -1.77
LSMEM1-201ENST00000312849 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
LSMEM1-201ENST00000312849 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
LSMEM1-201ENST00000312849 MUC2Q02817 5179 aa3.95□□□□□ -1.78
LSMEM1-201ENST00000312849 LCE4AQ5TA78 99 aa3.94□□□□□ -1.78
LSMEM1-201ENST00000312849 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
LSMEM1-201ENST00000312849 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
LSMEM1-201ENST00000312849 PCLOQ9Y6V0 5065 aa3.9□□□□□ -1.78
LSMEM1-201ENST00000312849 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
LSMEM1-201ENST00000312849 MT1BP07438 61 aa3.88□□□□□ -1.79
LSMEM1-201ENST00000312849 KRTAP10-5P60370 271 aa3.86□□□□□ -1.79
LSMEM1-201ENST00000312849 MT1XP80297 61 aa3.86□□□□□ -1.79
LSMEM1-201ENST00000312849 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.8
LSMEM1-201ENST00000312849 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
LSMEM1-201ENST00000312849 KRTAP9-3Q9BYQ3 159 aa3.82□□□□□ -1.8
LSMEM1-201ENST00000312849 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
LSMEM1-201ENST00000312849 RNF213Q63HN8 5207 aa3.8□□□□□ -1.8
LSMEM1-201ENST00000312849 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
LSMEM1-201ENST00000312849 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
LSMEM1-201ENST00000312849 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms