RNA–Protein interactions for RNA: ENST00000311873.9

ZC3HC1-201, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2 BASIC

Gene ZC3HC1, Length 2,017 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-201ENST00000311873 LINC01558Q9Y6Z2 57 aa6.05□□□□□ -1.44
ZC3HC1-201ENST00000311873 CHKB-CPT1BH3BT56 60 aa6.03□□□□□ -1.44
ZC3HC1-201ENST00000311873 IGKV2D-30A0A075B6S6 120 aa6□□□□□ -1.45
ZC3HC1-201ENST00000311873 SPINK7P58062 85 aa5.98□□□□□ -1.45
ZC3HC1-201ENST00000311873 C7orf65Q6ZTY9 151 aa5.98□□□□□ -1.45
ZC3HC1-201ENST00000311873 A6NED7 52 aa5.96□□□□□ -1.46
ZC3HC1-201ENST00000311873 FAT4Q6V0I7 4981 aa5.93□□□□□ -1.46
ZC3HC1-201ENST00000311873 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.47
ZC3HC1-201ENST00000311873 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
ZC3HC1-201ENST00000311873 A0A1B0GU69 56 aa5.86□□□□□ -1.47
ZC3HC1-201ENST00000311873 LCA10Q71F78 164 aa5.86□□□□□ -1.47
ZC3HC1-201ENST00000311873 SPTSSBQ8NFR3 76 aa5.84□□□□□ -1.47
ZC3HC1-201ENST00000311873 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
ZC3HC1-201ENST00000311873 PMAIP1Q13794 54 aa5.82□□□□□ -1.48
ZC3HC1-201ENST00000311873 A8MU10 97 aa5.81□□□□□ -1.48
ZC3HC1-201ENST00000311873 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
ZC3HC1-201ENST00000311873 FLGP20930 4061 aaPredicted RBP5.79□□□□□ -1.48
ZC3HC1-201ENST00000311873 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
ZC3HC1-201ENST00000311873 RBM12B-AS1Q9P1G2 102 aa5.77□□□□□ -1.49
ZC3HC1-201ENST00000311873 UQCR11O14957 56 aa5.75□□□□□ -1.49
ZC3HC1-201ENST00000311873 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
ZC3HC1-201ENST00000311873 A6NN06 94 aa5.72□□□□□ -1.49
ZC3HC1-201ENST00000311873 MT1HP80294 61 aa5.7□□□□□ -1.5
ZC3HC1-201ENST00000311873 MIR22HGQ0VDD5 57 aa5.7□□□□□ -1.5
ZC3HC1-201ENST00000311873 KTN1-AS1Q86SY8 53 aa5.69□□□□□ -1.5
ZC3HC1-201ENST00000311873 H1FX-AS1Q4G0G2 97 aa5.68□□□□□ -1.5
ZC3HC1-201ENST00000311873 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
ZC3HC1-201ENST00000311873 KRTAP3-3Q9BYR6 98 aa5.6□□□□□ -1.51
ZC3HC1-201ENST00000311873 S4R3F8 94 aa5.6□□□□□ -1.51
ZC3HC1-201ENST00000311873 M0R2T5 61 aa5.58□□□□□ -1.52
ZC3HC1-201ENST00000311873 A0A1B0GU33 70 aa5.57□□□□□ -1.52
ZC3HC1-201ENST00000311873 KRTAP10-6P60371 365 aaPredicted RBP5.52□□□□□ -1.53
ZC3HC1-201ENST00000311873 H0YAA0 97 aa5.51□□□□□ -1.53
ZC3HC1-201ENST00000311873 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
ZC3HC1-201ENST00000311873 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
ZC3HC1-201ENST00000311873 KRTAP9-8Q9BYQ0 159 aa5.47□□□□□ -1.53
ZC3HC1-201ENST00000311873 K7ERS5 55 aa5.44□□□□□ -1.54
ZC3HC1-201ENST00000311873 MT2AP02795 61 aa5.43□□□□□ -1.54
ZC3HC1-201ENST00000311873 MT1FP04733 61 aa5.41□□□□□ -1.54
ZC3HC1-201ENST00000311873 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
ZC3HC1-201ENST00000311873 KRTAP3-2Q9BYR7 98 aa5.36□□□□□ -1.55
ZC3HC1-201ENST00000311873 ADM2Q7Z4H4 148 aa5.35□□□□□ -1.55
ZC3HC1-201ENST00000311873 KRTAP10-10P60014 251 aa5.35□□□□□ -1.55
ZC3HC1-201ENST00000311873 P0C880 135 aa5.33□□□□□ -1.56
ZC3HC1-201ENST00000311873 H3BS24 57 aa5.33□□□□□ -1.56
ZC3HC1-201ENST00000311873 KRTAP13-4Q3LI77 160 aa5.28□□□□□ -1.56
ZC3HC1-201ENST00000311873 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
ZC3HC1-201ENST00000311873 A0A0D9SG42 100 aa5.26□□□□□ -1.57
ZC3HC1-201ENST00000311873 M0QZ58 72 aa5.24□□□□□ -1.57
ZC3HC1-201ENST00000311873 LINC01554Q52M75 96 aa5.24□□□□□ -1.57
ZC3HC1-201ENST00000311873 ROMO1P60602 79 aa5.23□□□□□ -1.57
ZC3HC1-201ENST00000311873 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.57
ZC3HC1-201ENST00000311873 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
ZC3HC1-201ENST00000311873 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
ZC3HC1-201ENST00000311873 LCE2BO14633 110 aa5.19□□□□□ -1.58
ZC3HC1-201ENST00000311873 USH2AO75445 5202 aa5.16□□□□□ -1.58
ZC3HC1-201ENST00000311873 SPRR2GQ9BYE4 73 aa5.16□□□□□ -1.58
ZC3HC1-201ENST00000311873 LCE2DQ5TA82 110 aaPredicted RBP5.14□□□□□ -1.59
ZC3HC1-201ENST00000311873 R4GN34 69 aa5.14□□□□□ -1.59
ZC3HC1-201ENST00000311873 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
ZC3HC1-201ENST00000311873 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
ZC3HC1-201ENST00000311873 CRIPTQ9P021 101 aa5.13□□□□□ -1.59
ZC3HC1-201ENST00000311873 KRTAP12-2P59991 146 aa5.12□□□□□ -1.59
ZC3HC1-201ENST00000311873 SPINT4Q6UDR6 99 aa5.12□□□□□ -1.59
ZC3HC1-201ENST00000311873 MT1BP07438 61 aa5.06□□□□□ -1.6
ZC3HC1-201ENST00000311873 SSPOA2VEC9 5147 aa5.06□□□□□ -1.6
ZC3HC1-201ENST00000311873 KRTAP19-8Q3LI54 63 aa5.06□□□□□ -1.6
ZC3HC1-201ENST00000311873 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
ZC3HC1-201ENST00000311873 PLAC4Q8WY50 150 aa4.89□□□□□ -1.63
ZC3HC1-201ENST00000311873 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
ZC3HC1-201ENST00000311873 KRTAP19-6Q3LI70 58 aa4.86□□□□□ -1.63
ZC3HC1-201ENST00000311873 FCGBPQ9Y6R7 5405 aaPredicted RBP4.86□□□□□ -1.63
ZC3HC1-201ENST00000311873 MT1XP80297 61 aa4.85□□□□□ -1.63
ZC3HC1-201ENST00000311873 CAMK2N1Q7Z7J9 78 aa4.84□□□□□ -1.64
ZC3HC1-201ENST00000311873 KRTAP10-5P60370 271 aa4.82□□□□□ -1.64
ZC3HC1-201ENST00000311873 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
ZC3HC1-201ENST00000311873 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
ZC3HC1-201ENST00000311873 PRO2289Q9P1D8 64 aa4.7□□□□□ -1.66
ZC3HC1-201ENST00000311873 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
ZC3HC1-201ENST00000311873 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
ZC3HC1-201ENST00000311873 KMT2DO14686 5537 aa4.67□□□□□ -1.66
ZC3HC1-201ENST00000311873 TNP1P09430 55 aa4.66□□□□□ -1.66
ZC3HC1-201ENST00000311873 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
ZC3HC1-201ENST00000311873 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
ZC3HC1-201ENST00000311873 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
ZC3HC1-201ENST00000311873 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.68
ZC3HC1-201ENST00000311873 KRTAP4-8A0A0G2JLE6 195 aa4.56□□□□□ -1.68
ZC3HC1-201ENST00000311873 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
ZC3HC1-201ENST00000311873 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
ZC3HC1-201ENST00000311873 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
ZC3HC1-201ENST00000311873 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
ZC3HC1-201ENST00000311873 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
ZC3HC1-201ENST00000311873 KRTAP8-1Q8IUC2 63 aa4.41□□□□□ -1.7
ZC3HC1-201ENST00000311873 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
ZC3HC1-201ENST00000311873 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
ZC3HC1-201ENST00000311873 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
ZC3HC1-201ENST00000311873 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
ZC3HC1-201ENST00000311873 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
ZC3HC1-201ENST00000311873 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
ZC3HC1-201ENST00000311873 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms