RNA–Protein interactions for RNA: ENST00000311172.11

FCHSD2-201, Transcript of FCH and double SH3 domains 2, humanhuman

TSL 1 (best) BASIC

Gene FCHSD2, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCHSD2-201ENST00000311172 EPPK1P58107 5090 aaKnown RBP3.5□□□□□ -1.85
FCHSD2-201ENST00000311172 KRTAP13-3Q3SY46 172 aa3.5□□□□□ -1.85
FCHSD2-201ENST00000311172 RYR2Q92736 4967 aa3.5□□□□□ -1.85
FCHSD2-201ENST00000311172 LRP1BQ9NZR2 4599 aa3.48□□□□□ -1.85
FCHSD2-201ENST00000311172 VPS13DQ5THJ4 4388 aa3.47□□□□□ -1.85
FCHSD2-201ENST00000311172 M0R2T5 61 aa3.46□□□□□ -1.86
FCHSD2-201ENST00000311172 KRTAP1-4P0C5Y4 121 aa3.44□□□□□ -1.86
FCHSD2-201ENST00000311172 P0C880 135 aa3.43□□□□□ -1.86
FCHSD2-201ENST00000311172 PKHD1P08F94 4074 aa3.42□□□□□ -1.86
FCHSD2-201ENST00000311172 HERC2O95714 4834 aa3.42□□□□□ -1.86
FCHSD2-201ENST00000311172 FRAS1Q86XX4 4008 aa3.41□□□□□ -1.86
FCHSD2-201ENST00000311172 DYNC2H1Q8NCM8 4307 aaKnown RBP3.41□□□□□ -1.86
FCHSD2-201ENST00000311172 S4R3F8 94 aa3.41□□□□□ -1.86
FCHSD2-201ENST00000311172 APOBP04114 4563 aaKnown RBP3.4□□□□□ -1.87
FCHSD2-201ENST00000311172 DNAH2Q9P225 4427 aa3.4□□□□□ -1.87
FCHSD2-201ENST00000311172 FAT3Q8TDW7 4589 aa3.4□□□□□ -1.87
FCHSD2-201ENST00000311172 MYCBP2O75592 4640 aa3.4□□□□□ -1.87
FCHSD2-201ENST00000311172 KRTAP17-1Q9BYP8 105 aa3.39□□□□□ -1.87
FCHSD2-201ENST00000311172 ALMS1Q8TCU4 4167 aa3.39□□□□□ -1.87
FCHSD2-201ENST00000311172 BIRC6Q9NR09 4857 aa3.39□□□□□ -1.87
FCHSD2-201ENST00000311172 VPS13BQ7Z7G8 4022 aa3.38□□□□□ -1.87
FCHSD2-201ENST00000311172 DNAH6Q9C0G6 4158 aa3.38□□□□□ -1.87
FCHSD2-201ENST00000311172 LRP1Q07954 4544 aaKnown RBP3.37□□□□□ -1.87
FCHSD2-201ENST00000311172 TPRXLQ17RH7 258 aa3.37□□□□□ -1.87
FCHSD2-201ENST00000311172 DNAH8Q96JB1 4490 aa3.36□□□□□ -1.87
FCHSD2-201ENST00000311172 DNAH17Q9UFH2 4485 aa3.35□□□□□ -1.87
FCHSD2-201ENST00000311172 HECTD4Q9Y4D8 3996 aa3.35□□□□□ -1.87
FCHSD2-201ENST00000311172 CAMK2N1Q7Z7J9 78 aa3.35□□□□□ -1.87
FCHSD2-201ENST00000311172 R4GN34 69 aa3.35□□□□□ -1.87
FCHSD2-201ENST00000311172 M0QZ58 72 aa3.34□□□□□ -1.87
FCHSD2-201ENST00000311172 SEC61BP60468 96 aaKnown RBP3.33□□□□□ -1.88
FCHSD2-201ENST00000311172 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
FCHSD2-201ENST00000311172 ABCA13Q86UQ4 5058 aa3.32□□□□□ -1.88
FCHSD2-201ENST00000311172 PCLOQ9Y6V0 5065 aa3.32□□□□□ -1.88
FCHSD2-201ENST00000311172 KRTAP3-1Q9BYR8 98 aa3.32□□□□□ -1.88
FCHSD2-201ENST00000311172 MT1HL1P0DM35 61 aa3.31□□□□□ -1.88
FCHSD2-201ENST00000311172 FAT2Q9NYQ8 4349 aa3.31□□□□□ -1.88
FCHSD2-201ENST00000311172 KRTAP10-4P60372 401 aaPredicted RBP3.3□□□□□ -1.88
FCHSD2-201ENST00000311172 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
FCHSD2-201ENST00000311172 HERC1Q15751 4861 aa3.27□□□□□ -1.89
FCHSD2-201ENST00000311172 KRTAP19-1Q8IUB9 90 aa3.27□□□□□ -1.89
FCHSD2-201ENST00000311172 XP32Q5T750 250 aa3.27□□□□□ -1.89
FCHSD2-201ENST00000311172 PLAC4Q8WY50 150 aa3.26□□□□□ -1.89
FCHSD2-201ENST00000311172 LRP2P98164 4655 aa3.26□□□□□ -1.89
FCHSD2-201ENST00000311172 KRTAP12-2P59991 146 aa3.26□□□□□ -1.89
FCHSD2-201ENST00000311172 RPS29P62273 56 aaKnown RBP3.26□□□□□ -1.89
FCHSD2-201ENST00000311172 HSPG2P98160 4391 aa3.24□□□□□ -1.89
FCHSD2-201ENST00000311172 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
FCHSD2-201ENST00000311172 PKD1P98161 4303 aa3.22□□□□□ -1.89
FCHSD2-201ENST00000311172 KRTAP10-6P60371 365 aaPredicted RBP3.21□□□□□ -1.9
FCHSD2-201ENST00000311172 KRTAP15-1Q3LI76 137 aa3.2□□□□□ -1.9
FCHSD2-201ENST00000311172 RNF213Q63HN8 5207 aa3.19□□□□□ -1.9
FCHSD2-201ENST00000311172 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
FCHSD2-201ENST00000311172 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
FCHSD2-201ENST00000311172 KRTAP12-1P59990 96 aa3.18□□□□□ -1.9
FCHSD2-201ENST00000311172 UBR4Q5T4S7 5183 aa3.18□□□□□ -1.9
FCHSD2-201ENST00000311172 FSIP2Q5CZC0 6907 aa3.15□□□□□ -1.91
FCHSD2-201ENST00000311172 LPAP08519 4548 aa3.12□□□□□ -1.91
FCHSD2-201ENST00000311172 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
FCHSD2-201ENST00000311172 LOC100996750A0A140TA64 210 aa3.11□□□□□ -1.91
FCHSD2-201ENST00000311172 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
FCHSD2-201ENST00000311172 KRTAP9-3Q9BYQ3 159 aa3.1□□□□□ -1.91
FCHSD2-201ENST00000311172 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
FCHSD2-201ENST00000311172 MUC2Q02817 5179 aa3.08□□□□□ -1.92
FCHSD2-201ENST00000311172 KRTAP10-10P60014 251 aa3.06□□□□□ -1.92
FCHSD2-201ENST00000311172 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
FCHSD2-201ENST00000311172 TNP1P09430 55 aa3.05□□□□□ -1.92
FCHSD2-201ENST00000311172 KRTAP4-1Q9BYQ7 146 aa3.03□□□□□ -1.92
FCHSD2-201ENST00000311172 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
FCHSD2-201ENST00000311172 PKHD1L1Q86WI1 4243 aa3.01□□□□□ -1.93
FCHSD2-201ENST00000311172 KRTAP4-8Q9BYQ9 185 aa3□□□□□ -1.93
FCHSD2-201ENST00000311172 FAT4Q6V0I7 4981 aa2.99□□□□□ -1.93
FCHSD2-201ENST00000311172 HMCN2Q8NDA2 5059 aa2.96□□□□□ -1.94
FCHSD2-201ENST00000311172 KRTAP9-2Q9BYQ4 174 aa2.94□□□□□ -1.94
FCHSD2-201ENST00000311172 TNXBP22105 4242 aa2.93□□□□□ -1.94
FCHSD2-201ENST00000311172 PRO2289Q9P1D8 64 aa2.88□□□□□ -1.95
FCHSD2-201ENST00000311172 MT1HP80294 61 aa2.84□□□□□ -1.95
FCHSD2-201ENST00000311172 KRTAP23-1A1A580 65 aa2.83□□□□□ -1.96
FCHSD2-201ENST00000311172 INE1O15225 51 aa2.81□□□□□ -1.96
FCHSD2-201ENST00000311172 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
FCHSD2-201ENST00000311172 MT2AP02795 61 aa2.72□□□□□ -1.97
FCHSD2-201ENST00000311172 MT1FP04733 61 aa2.72□□□□□ -1.97
FCHSD2-201ENST00000311172 USH2AO75445 5202 aa2.72□□□□□ -1.97
FCHSD2-201ENST00000311172 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
FCHSD2-201ENST00000311172 MUC17Q685J3 4493 aa2.67□□□□□ -1.98
FCHSD2-201ENST00000311172 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.99
FCHSD2-201ENST00000311172 KRTAP9-8Q9BYQ0 159 aa2.61□□□□□ -1.99
FCHSD2-201ENST00000311172 KRTAP12-3P60328 96 aa2.6□□□□□ -1.99
FCHSD2-201ENST00000311172 FLGP20930 4061 aaPredicted RBP2.59□□□□□ -2
FCHSD2-201ENST00000311172 CRCT1Q9UGL9 99 aa2.56□□□□□ -2
FCHSD2-201ENST00000311172 KRTAP10-12P60413 245 aa2.56□□□□□ -2
FCHSD2-201ENST00000311172 KRTAP4-8A0A0G2JLE6 195 aa2.55□□□□□ -2
FCHSD2-201ENST00000311172 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
FCHSD2-201ENST00000311172 SYNE2Q8WXH0 6885 aaKnown RBP2.54□□□□□ -2
FCHSD2-201ENST00000311172 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
FCHSD2-201ENST00000311172 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
FCHSD2-201ENST00000311172 KRTAP4-9Q9BYQ8 210 aa2.51□□□□□ -2.01
FCHSD2-201ENST00000311172 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
FCHSD2-201ENST00000311172 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
FCHSD2-201ENST00000311172 KRTAP8-1Q8IUC2 63 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms