RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 SSBP3-AS1Q7Z2R9 100 aa7.15□□□□□ -1.27
VANGL1-201ENST00000310260 IGKV2-30P06310 120 aa7.13□□□□□ -1.27
VANGL1-201ENST00000310260 RETNLBQ9BQ08 111 aa7.11□□□□□ -1.27
VANGL1-201ENST00000310260 SPINK1P00995 79 aa7.06□□□□□ -1.28
VANGL1-201ENST00000310260 HERC1Q15751 4861 aa7.06□□□□□ -1.28
VANGL1-201ENST00000310260 KRTAP16-1A8MUX0 517 aa7.02□□□□□ -1.29
VANGL1-201ENST00000310260 IGKV2D-30A0A075B6S6 120 aa6.98□□□□□ -1.29
VANGL1-201ENST00000310260 A8MUU9 505 aa6.94□□□□□ -1.3
VANGL1-201ENST00000310260 RPS29P62273 56 aaKnown RBP6.94□□□□□ -1.3
VANGL1-201ENST00000310260 H0YAA0 97 aa6.93□□□□□ -1.3
VANGL1-201ENST00000310260 KRTAP25-1Q3LHN0 102 aa6.92□□□□□ -1.3
VANGL1-201ENST00000310260 ROMO1P60602 79 aa6.88□□□□□ -1.31
VANGL1-201ENST00000310260 C9orf92A6NGG3 77 aa6.85□□□□□ -1.31
VANGL1-201ENST00000310260 LPAP08519 4548 aa6.83□□□□□ -1.32
VANGL1-201ENST00000310260 HMCN2Q8NDA2 5059 aa6.8□□□□□ -1.32
VANGL1-201ENST00000310260 LRP2P98164 4655 aa6.77□□□□□ -1.33
VANGL1-201ENST00000310260 TPRXLQ17RH7 258 aa6.77□□□□□ -1.33
VANGL1-201ENST00000310260 A0A1B0GU33 70 aa6.76□□□□□ -1.33
VANGL1-201ENST00000310260 H1FX-AS1Q4G0G2 97 aa6.75□□□□□ -1.33
VANGL1-201ENST00000310260 XP32Q5T750 250 aa6.71□□□□□ -1.34
VANGL1-201ENST00000310260 P0C880 135 aa6.7□□□□□ -1.34
VANGL1-201ENST00000310260 CRIPTQ9P021 101 aa6.69□□□□□ -1.34
VANGL1-201ENST00000310260 KRTAP3-1Q9BYR8 98 aa6.67□□□□□ -1.34
VANGL1-201ENST00000310260 UBR4Q5T4S7 5183 aa6.64□□□□□ -1.35
VANGL1-201ENST00000310260 K7ERS5 55 aa6.62□□□□□ -1.35
VANGL1-201ENST00000310260 COX6B2Q6YFQ2 88 aa6.61□□□□□ -1.35
VANGL1-201ENST00000310260 SEC61BP60468 96 aaKnown RBP6.59□□□□□ -1.35
VANGL1-201ENST00000310260 RPL37P61927 97 aaKnown RBP6.59□□□□□ -1.35
VANGL1-201ENST00000310260 C20orf166-AS1Q96NR2 134 aa6.58□□□□□ -1.36
VANGL1-201ENST00000310260 RNF213Q63HN8 5207 aa6.54□□□□□ -1.36
VANGL1-201ENST00000310260 MUC2Q02817 5179 aa6.53□□□□□ -1.36
VANGL1-201ENST00000310260 KRTAP4-1Q9BYQ7 146 aa6.5□□□□□ -1.37
VANGL1-201ENST00000310260 SPINT4Q6UDR6 99 aa6.48□□□□□ -1.37
VANGL1-201ENST00000310260 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.38
VANGL1-201ENST00000310260 KRTAP10-6P60371 365 aaPredicted RBP6.45□□□□□ -1.38
VANGL1-201ENST00000310260 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
VANGL1-201ENST00000310260 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
VANGL1-201ENST00000310260 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
VANGL1-201ENST00000310260 A0A0D9SG42 100 aa6.39□□□□□ -1.39
VANGL1-201ENST00000310260 NDUFAF8A1L188 74 aa6.39□□□□□ -1.39
VANGL1-201ENST00000310260 KRTAP3-3Q9BYR6 98 aa6.37□□□□□ -1.39
VANGL1-201ENST00000310260 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
VANGL1-201ENST00000310260 S4R3F8 94 aa6.29□□□□□ -1.4
VANGL1-201ENST00000310260 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
VANGL1-201ENST00000310260 KRTAP19-2Q3LHN2 52 aa6.23□□□□□ -1.41
VANGL1-201ENST00000310260 LCE2CQ5TA81 110 aa6.21□□□□□ -1.42
VANGL1-201ENST00000310260 FAT4Q6V0I7 4981 aa6.21□□□□□ -1.42
VANGL1-201ENST00000310260 KRTAP12-1P59990 96 aa6.19□□□□□ -1.42
VANGL1-201ENST00000310260 M0R2T5 61 aa6.15□□□□□ -1.43
VANGL1-201ENST00000310260 MT1HP80294 61 aa6.12□□□□□ -1.43
VANGL1-201ENST00000310260 FLGP20930 4061 aaPredicted RBP6.07□□□□□ -1.44
VANGL1-201ENST00000310260 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
VANGL1-201ENST00000310260 M0QZ58 72 aa6.04□□□□□ -1.44
VANGL1-201ENST00000310260 A0A0A0MQY5 61 aa5.97□□□□□ -1.45
VANGL1-201ENST00000310260 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
VANGL1-201ENST00000310260 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.46
VANGL1-201ENST00000310260 LUZP6Q538Z0 58 aa5.9□□□□□ -1.47
VANGL1-201ENST00000310260 KRTAP9-8Q9BYQ0 159 aa5.84□□□□□ -1.47
VANGL1-201ENST00000310260 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
VANGL1-201ENST00000310260 MT2AP02795 61 aa5.81□□□□□ -1.48
VANGL1-201ENST00000310260 MT1FP04733 61 aa5.77□□□□□ -1.49
VANGL1-201ENST00000310260 R4GN34 69 aa5.77□□□□□ -1.49
VANGL1-201ENST00000310260 LCE2DQ5TA82 110 aaPredicted RBP5.76□□□□□ -1.49
VANGL1-201ENST00000310260 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
VANGL1-201ENST00000310260 KRTAP9-2Q9BYQ4 174 aa5.66□□□□□ -1.5
VANGL1-201ENST00000310260 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
VANGL1-201ENST00000310260 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
VANGL1-201ENST00000310260 LCE2BO14633 110 aa5.56□□□□□ -1.52
VANGL1-201ENST00000310260 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
VANGL1-201ENST00000310260 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
VANGL1-201ENST00000310260 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
VANGL1-201ENST00000310260 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
VANGL1-201ENST00000310260 SPRR2GQ9BYE4 73 aa5.48□□□□□ -1.53
VANGL1-201ENST00000310260 USH2AO75445 5202 aa5.47□□□□□ -1.53
VANGL1-201ENST00000310260 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
VANGL1-201ENST00000310260 TNP1P09430 55 aa5.37□□□□□ -1.55
VANGL1-201ENST00000310260 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
VANGL1-201ENST00000310260 MT1BP07438 61 aa5.36□□□□□ -1.55
VANGL1-201ENST00000310260 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
VANGL1-201ENST00000310260 SSPOA2VEC9 5147 aa5.33□□□□□ -1.56
VANGL1-201ENST00000310260 KRTAP19-6Q3LI70 58 aa5.25□□□□□ -1.57
VANGL1-201ENST00000310260 PRO2289Q9P1D8 64 aa5.22□□□□□ -1.57
VANGL1-201ENST00000310260 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.58
VANGL1-201ENST00000310260 KRTAP10-5P60370 271 aa5.16□□□□□ -1.58
VANGL1-201ENST00000310260 MT1XP80297 61 aa5.13□□□□□ -1.59
VANGL1-201ENST00000310260 INE1O15225 51 aa5.1□□□□□ -1.59
VANGL1-201ENST00000310260 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
VANGL1-201ENST00000310260 KRTAP9-1A8MXZ3 250 aaPredicted RBP5□□□□□ -1.61
VANGL1-201ENST00000310260 MACF1Q9UPN3 7388 aaKnown RBP4.97□□□□□ -1.61
VANGL1-201ENST00000310260 KRTAP8-1Q8IUC2 63 aa4.95□□□□□ -1.62
VANGL1-201ENST00000310260 KRTAP10-7P60409 375 aaPredicted RBP4.94□□□□□ -1.62
VANGL1-201ENST00000310260 KMT2DO14686 5537 aa4.9□□□□□ -1.63
VANGL1-201ENST00000310260 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
VANGL1-201ENST00000310260 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
VANGL1-201ENST00000310260 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
VANGL1-201ENST00000310260 KRTAP9-7A8MTY7 169 aa4.85□□□□□ -1.63
VANGL1-201ENST00000310260 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
VANGL1-201ENST00000310260 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
VANGL1-201ENST00000310260 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
VANGL1-201ENST00000310260 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms