RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 KRTAP10-4P60372 401 aaPredicted RBP2.76□□□□□ -1.97
CAST-201ENST00000309190 LIMD2Q9BT23 127 aa2.75□□□□□ -1.97
CAST-201ENST00000309190 SPTSSBQ8NFR3 76 aa2.75□□□□□ -1.97
CAST-201ENST00000309190 MT1HL1P0DM35 61 aa2.74□□□□□ -1.97
CAST-201ENST00000309190 COX6B2Q6YFQ2 88 aa2.74□□□□□ -1.97
CAST-201ENST00000309190 KRTAP3-1Q9BYR8 98 aa2.73□□□□□ -1.97
CAST-201ENST00000309190 LINC01558Q9Y6Z2 57 aa2.73□□□□□ -1.97
CAST-201ENST00000309190 A0A1B0GVX0 72 aa2.73□□□□□ -1.97
CAST-201ENST00000309190 ATP11AUNQ6ZP68 121 aa2.72□□□□□ -1.97
CAST-201ENST00000309190 HMCN2Q8NDA2 5059 aa2.72□□□□□ -1.97
CAST-201ENST00000309190 C7orf65Q6ZTY9 151 aa2.72□□□□□ -1.97
CAST-201ENST00000309190 CAMK2N1Q7Z7J9 78 aa2.71□□□□□ -1.97
CAST-201ENST00000309190 KRTAP10-8P60410 259 aa2.71□□□□□ -1.98
CAST-201ENST00000309190 Q5W150 140 aa2.71□□□□□ -1.98
CAST-201ENST00000309190 HRES1P13985 223 aa2.7□□□□□ -1.98
CAST-201ENST00000309190 H0Y9P7 68 aa2.7□□□□□ -1.98
CAST-201ENST00000309190 M0R2T5 61 aa2.7□□□□□ -1.98
CAST-201ENST00000309190 SPAG11AQ6PDA7 123 aa2.69□□□□□ -1.98
CAST-201ENST00000309190 MRPL34Q9BQ48 92 aaKnown RBP2.69□□□□□ -1.98
CAST-201ENST00000309190 COA5Q86WW8 74 aa2.68□□□□□ -1.98
CAST-201ENST00000309190 CDC42SE1Q9NRR8 79 aa2.68□□□□□ -1.98
CAST-201ENST00000309190 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
CAST-201ENST00000309190 SPINK7P58062 85 aa2.66□□□□□ -1.98
CAST-201ENST00000309190 DMAC1Q96GE9 116 aa2.65□□□□□ -1.98
CAST-201ENST00000309190 TP53AIP1Q9HCN2 124 aa2.65□□□□□ -1.98
CAST-201ENST00000309190 XP32Q5T750 250 aa2.65□□□□□ -1.98
CAST-201ENST00000309190 A8MUU9 505 aa2.62□□□□□ -1.99
CAST-201ENST00000309190 KRTAP9-2Q9BYQ4 174 aa2.62□□□□□ -1.99
CAST-201ENST00000309190 KRTAP9-6A0A140TA67 174 aa2.62□□□□□ -1.99
CAST-201ENST00000309190 CHKB-CPT1BH3BT56 60 aa2.62□□□□□ -1.99
CAST-201ENST00000309190 SPATA8Q6RVD6 105 aa2.61□□□□□ -1.99
CAST-201ENST00000309190 PRR15LQ9BU68 103 aa2.59□□□□□ -2
CAST-201ENST00000309190 KRTAP4-1Q9BYQ7 146 aa2.57□□□□□ -2
CAST-201ENST00000309190 KRTAP15-1Q3LI76 137 aa2.57□□□□□ -2
CAST-201ENST00000309190 KRTAP25-1Q3LHN0 102 aa2.56□□□□□ -2
CAST-201ENST00000309190 USH2AO75445 5202 aa2.56□□□□□ -2
CAST-201ENST00000309190 ROMO1P60602 79 aa2.55□□□□□ -2
CAST-201ENST00000309190 RPL37P61927 97 aaKnown RBP2.55□□□□□ -2
CAST-201ENST00000309190 MIR22HGQ0VDD5 57 aa2.54□□□□□ -2
CAST-201ENST00000309190 LOC100996750A0A140TA64 210 aa2.54□□□□□ -2
CAST-201ENST00000309190 KRTAP4-6Q9BYQ5 205 aa2.54□□□□□ -2
CAST-201ENST00000309190 A0A0D9SG42 100 aa2.53□□□□□ -2
CAST-201ENST00000309190 TPRXLQ17RH7 258 aa2.53□□□□□ -2.01
CAST-201ENST00000309190 C20orf166-AS1Q96NR2 134 aa2.52□□□□□ -2.01
CAST-201ENST00000309190 H0YAA0 97 aa2.52□□□□□ -2.01
CAST-201ENST00000309190 MUC17Q685J3 4493 aa2.51□□□□□ -2.01
CAST-201ENST00000309190 RPS29P62273 56 aaKnown RBP2.51□□□□□ -2.01
CAST-201ENST00000309190 ACYP2P14621 99 aa2.49□□□□□ -2.01
CAST-201ENST00000309190 CSAG1Q6PB30 78 aa2.47□□□□□ -2.01
CAST-201ENST00000309190 FLGP20930 4061 aaPredicted RBP2.47□□□□□ -2.01
CAST-201ENST00000309190 S4R3F8 94 aa2.45□□□□□ -2.02
CAST-201ENST00000309190 KRTAP10-6P60371 365 aaPredicted RBP2.45□□□□□ -2.02
CAST-201ENST00000309190 R4GN34 69 aa2.44□□□□□ -2.02
CAST-201ENST00000309190 KRTAP10-10P60014 251 aa2.44□□□□□ -2.02
CAST-201ENST00000309190 SPINT4Q6UDR6 99 aa2.43□□□□□ -2.02
CAST-201ENST00000309190 P0C880 135 aa2.42□□□□□ -2.02
CAST-201ENST00000309190 A0A1B0GU69 56 aa2.41□□□□□ -2.02
CAST-201ENST00000309190 UQCR11O14957 56 aa2.41□□□□□ -2.02
CAST-201ENST00000309190 KRTAP13-4Q3LI77 160 aa2.41□□□□□ -2.02
CAST-201ENST00000309190 H1FX-AS1Q4G0G2 97 aa2.41□□□□□ -2.02
CAST-201ENST00000309190 CRCT1Q9UGL9 99 aa2.41□□□□□ -2.02
CAST-201ENST00000309190 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.03
CAST-201ENST00000309190 CRIPTQ9P021 101 aa2.39□□□□□ -2.03
CAST-201ENST00000309190 M0QZ58 72 aa2.39□□□□□ -2.03
CAST-201ENST00000309190 A0A1B0GU33 70 aa2.37□□□□□ -2.03
CAST-201ENST00000309190 MT1HP80294 61 aa2.34□□□□□ -2.04
CAST-201ENST00000309190 KRTAP19-2Q3LHN2 52 aa2.34□□□□□ -2.04
CAST-201ENST00000309190 KRTAP9-7A8MTY7 169 aa2.33□□□□□ -2.04
CAST-201ENST00000309190 DSTQ03001 7570 aaKnown RBP2.33□□□□□ -2.04
CAST-201ENST00000309190 KMT2DO14686 5537 aa2.32□□□□□ -2.04
CAST-201ENST00000309190 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
CAST-201ENST00000309190 KRTAP9-8Q9BYQ0 159 aa2.3□□□□□ -2.04
CAST-201ENST00000309190 KRTAP12-2P59991 146 aa2.28□□□□□ -2.04
CAST-201ENST00000309190 MT1FP04733 61 aa2.27□□□□□ -2.05
CAST-201ENST00000309190 KRTAP12-1P59990 96 aa2.27□□□□□ -2.05
CAST-201ENST00000309190 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.26□□□□□ -2.05
CAST-201ENST00000309190 MT2AP02795 61 aa2.24□□□□□ -2.05
CAST-201ENST00000309190 KRTAP19-4Q3LI73 84 aa2.23□□□□□ -2.05
CAST-201ENST00000309190 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
CAST-201ENST00000309190 SYNE2Q8WXH0 6885 aaKnown RBP2.23□□□□□ -2.05
CAST-201ENST00000309190 PRO2289Q9P1D8 64 aa2.22□□□□□ -2.05
CAST-201ENST00000309190 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
CAST-201ENST00000309190 LCE4AQ5TA78 99 aa2.19□□□□□ -2.06
CAST-201ENST00000309190 C10orf95Q9H7T3 257 aa2.19□□□□□ -2.06
CAST-201ENST00000309190 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
CAST-201ENST00000309190 KRTAP9-4Q9BYQ2 154 aa2.18□□□□□ -2.06
CAST-201ENST00000309190 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
CAST-201ENST00000309190 MACF1Q9UPN3 7388 aaKnown RBP2.17□□□□□ -2.06
CAST-201ENST00000309190 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
CAST-201ENST00000309190 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
CAST-201ENST00000309190 LCE5AQ5TCM9 118 aa2.15□□□□□ -2.06
CAST-201ENST00000309190 KRTAP19-1Q8IUB9 90 aa2.13□□□□□ -2.07
CAST-201ENST00000309190 KRTAP9-3Q9BYQ3 159 aa2.09□□□□□ -2.07
CAST-201ENST00000309190 KRTAP4-8A0A0G2JLE6 195 aa2.09□□□□□ -2.08
CAST-201ENST00000309190 KRTAP4-8Q9BYQ9 185 aa2.09□□□□□ -2.08
CAST-201ENST00000309190 KRTAP9-9Q9BYP9 154 aa2.07□□□□□ -2.08
CAST-201ENST00000309190 MT1BP07438 61 aa2.05□□□□□ -2.08
CAST-201ENST00000309190 NEBP20929 6669 aa2.05□□□□□ -2.08
CAST-201ENST00000309190 MDN1Q9NU22 5596 aa2.04□□□□□ -2.08
CAST-201ENST00000309190 KRTAP10-7P60409 375 aaPredicted RBP2.03□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms