RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.1
NDUFA11-201ENST00000308961 ACYP2P14621 99 aa8.2□□□□□ -1.1
NDUFA11-201ENST00000308961 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
NDUFA11-201ENST00000308961 PCP4P48539 62 aa8.16□□□□□ -1.1
NDUFA11-201ENST00000308961 CSAG1Q6PB30 78 aa8.13□□□□□ -1.11
NDUFA11-201ENST00000308961 KRTAP9-8Q9BYQ0 159 aa8.13□□□□□ -1.11
NDUFA11-201ENST00000308961 MT2AP02795 61 aa8.06□□□□□ -1.12
NDUFA11-201ENST00000308961 COA5Q86WW8 74 aa8.06□□□□□ -1.12
NDUFA11-201ENST00000308961 CHKB-CPT1BH3BT56 60 aa8.04□□□□□ -1.12
NDUFA11-201ENST00000308961 TMEM258P61165 79 aa8.04□□□□□ -1.12
NDUFA11-201ENST00000308961 MT1FP04733 61 aa8.01□□□□□ -1.13
NDUFA11-201ENST00000308961 ATP5EP56381 51 aaPredicted RBP8.01□□□□□ -1.13
NDUFA11-201ENST00000308961 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
NDUFA11-201ENST00000308961 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
NDUFA11-201ENST00000308961 H0YAA0 97 aa7.9□□□□□ -1.14
NDUFA11-201ENST00000308961 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
NDUFA11-201ENST00000308961 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
NDUFA11-201ENST00000308961 KRTAP9-3Q9BYQ3 159 aa7.85□□□□□ -1.15
NDUFA11-201ENST00000308961 P0C880 135 aa7.82□□□□□ -1.16
NDUFA11-201ENST00000308961 SERP1Q9Y6X1 66 aa7.81□□□□□ -1.16
NDUFA11-201ENST00000308961 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
NDUFA11-201ENST00000308961 KRTAP19-1Q8IUB9 90 aa7.72□□□□□ -1.17
NDUFA11-201ENST00000308961 LCE2BO14633 110 aa7.71□□□□□ -1.18
NDUFA11-201ENST00000308961 KRTAP9-2Q9BYQ4 174 aa7.68□□□□□ -1.18
NDUFA11-201ENST00000308961 CRIPTQ9P021 101 aa7.67□□□□□ -1.18
NDUFA11-201ENST00000308961 SPRR2GQ9BYE4 73 aa7.66□□□□□ -1.18
NDUFA11-201ENST00000308961 SEC61GP60059 68 aa7.63□□□□□ -1.19
NDUFA11-201ENST00000308961 RPS28P62857 69 aaKnown RBP7.63□□□□□ -1.19
NDUFA11-201ENST00000308961 LINC01558Q9Y6Z2 57 aa7.63□□□□□ -1.19
NDUFA11-201ENST00000308961 A0A1B0GU69 56 aa7.6□□□□□ -1.19
NDUFA11-201ENST00000308961 M0QZ58 72 aa7.58□□□□□ -1.2
NDUFA11-201ENST00000308961 R4GN34 69 aa7.58□□□□□ -1.2
NDUFA11-201ENST00000308961 SMIM26A0A096LP01 95 aa7.55□□□□□ -1.2
NDUFA11-201ENST00000308961 KRTAP19-8Q3LI54 63 aa7.55□□□□□ -1.2
NDUFA11-201ENST00000308961 KRTAP13-4Q3LI77 160 aa7.55□□□□□ -1.2
NDUFA11-201ENST00000308961 USH2AO75445 5202 aa7.52□□□□□ -1.21
NDUFA11-201ENST00000308961 A0A1B0GU33 70 aa7.51□□□□□ -1.21
NDUFA11-201ENST00000308961 MT1BP07438 61 aa7.51□□□□□ -1.21
NDUFA11-201ENST00000308961 Q1T7F1 81 aa7.5□□□□□ -1.21
NDUFA11-201ENST00000308961 PRR15LQ9BU68 103 aa7.48□□□□□ -1.21
NDUFA11-201ENST00000308961 KRTAP9-6A0A140TA67 174 aa7.47□□□□□ -1.21
NDUFA11-201ENST00000308961 LINC01554Q52M75 96 aa7.45□□□□□ -1.22
NDUFA11-201ENST00000308961 Q5VV11 94 aa7.45□□□□□ -1.22
NDUFA11-201ENST00000308961 SPATA8Q6RVD6 105 aa7.45□□□□□ -1.22
NDUFA11-201ENST00000308961 V9GYY9 64 aa7.45□□□□□ -1.22
NDUFA11-201ENST00000308961 PSPHP1O15172 72 aa7.42□□□□□ -1.22
NDUFA11-201ENST00000308961 FSIP2Q5CZC0 6907 aa7.37□□□□□ -1.23
NDUFA11-201ENST00000308961 CRCT1Q9UGL9 99 aa7.35□□□□□ -1.23
NDUFA11-201ENST00000308961 A0A0D9SG42 100 aa7.33□□□□□ -1.24
NDUFA11-201ENST00000308961 SSPOA2VEC9 5147 aa7.33□□□□□ -1.24
NDUFA11-201ENST00000308961 A8MU10 97 aa7.31□□□□□ -1.24
NDUFA11-201ENST00000308961 KRTAP19-6Q3LI70 58 aa7.29□□□□□ -1.24
NDUFA11-201ENST00000308961 PLAC4Q8WY50 150 aa7.29□□□□□ -1.24
NDUFA11-201ENST00000308961 A6NN06 94 aa7.28□□□□□ -1.24
NDUFA11-201ENST00000308961 UQCR11O14957 56 aa7.28□□□□□ -1.24
NDUFA11-201ENST00000308961 KRTAP12-1P59990 96 aa7.21□□□□□ -1.26
NDUFA11-201ENST00000308961 MIR22HGQ0VDD5 57 aa7.2□□□□□ -1.26
NDUFA11-201ENST00000308961 KRTAP12-2P59991 146 aa7.18□□□□□ -1.26
NDUFA11-201ENST00000308961 KRTAP10-5P60370 271 aa7.18□□□□□ -1.26
NDUFA11-201ENST00000308961 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
NDUFA11-201ENST00000308961 MT1XP80297 61 aa7.16□□□□□ -1.26
NDUFA11-201ENST00000308961 A6NED7 52 aa7.15□□□□□ -1.26
NDUFA11-201ENST00000308961 FCGBPQ9Y6R7 5405 aaPredicted RBP7.08□□□□□ -1.28
NDUFA11-201ENST00000308961 CAMK2N1Q7Z7J9 78 aa7.06□□□□□ -1.28
NDUFA11-201ENST00000308961 PRO2289Q9P1D8 64 aa7.02□□□□□ -1.29
NDUFA11-201ENST00000308961 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
NDUFA11-201ENST00000308961 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
NDUFA11-201ENST00000308961 K7ERS5 55 aa6.87□□□□□ -1.31
NDUFA11-201ENST00000308961 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
NDUFA11-201ENST00000308961 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.83□□□□□ -1.32
NDUFA11-201ENST00000308961 BRK1Q8WUW1 75 aa6.79□□□□□ -1.32
NDUFA11-201ENST00000308961 KRTAP10-12P60413 245 aa6.78□□□□□ -1.32
NDUFA11-201ENST00000308961 MACF1Q9UPN3 7388 aaKnown RBP6.77□□□□□ -1.33
NDUFA11-201ENST00000308961 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
NDUFA11-201ENST00000308961 KRTAP4-8Q9BYQ9 185 aa6.71□□□□□ -1.34
NDUFA11-201ENST00000308961 KRTAP9-7A8MTY7 169 aa6.66□□□□□ -1.34
NDUFA11-201ENST00000308961 TNP1P09430 55 aa6.65□□□□□ -1.34
NDUFA11-201ENST00000308961 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.35
NDUFA11-201ENST00000308961 ROMO1P60602 79 aa6.59□□□□□ -1.35
NDUFA11-201ENST00000308961 KMT2DO14686 5537 aa6.58□□□□□ -1.36
NDUFA11-201ENST00000308961 KRTAP8-1Q8IUC2 63 aa6.56□□□□□ -1.36
NDUFA11-201ENST00000308961 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
NDUFA11-201ENST00000308961 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
NDUFA11-201ENST00000308961 LCE3AQ5TA76 89 aa6.51□□□□□ -1.37
NDUFA11-201ENST00000308961 KRTAP5-9P26371 169 aa6.47□□□□□ -1.37
NDUFA11-201ENST00000308961 SPRR2FQ96RM1 72 aa6.42□□□□□ -1.38
NDUFA11-201ENST00000308961 PRO0628Q9UI54 55 aa6.42□□□□□ -1.38
NDUFA11-201ENST00000308961 PMAIP1Q13794 54 aa6.41□□□□□ -1.38
NDUFA11-201ENST00000308961 KRTAP19-7Q3SYF9 63 aa6.4□□□□□ -1.38
NDUFA11-201ENST00000308961 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
NDUFA11-201ENST00000308961 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
NDUFA11-201ENST00000308961 MT1EP04732 61 aa6.3□□□□□ -1.4
NDUFA11-201ENST00000308961 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
NDUFA11-201ENST00000308961 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
NDUFA11-201ENST00000308961 MUC12Q9UKN1 5478 aa6.21□□□□□ -1.42
NDUFA11-201ENST00000308961 SPRR2EP22531 72 aa6.2□□□□□ -1.42
NDUFA11-201ENST00000308961 SPRR2BP35325 72 aa6.2□□□□□ -1.42
NDUFA11-201ENST00000308961 SPRR2AP35326 72 aa6.2□□□□□ -1.42
NDUFA11-201ENST00000308961 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
NDUFA11-201ENST00000308961 NEBP20929 6669 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms