RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 UQCR11O14957 56 aa10.45□□□□□ -0.74
SSH3-202ENST00000308298 TPRXLQ17RH7 258 aa10.44□□□□□ -0.74
SSH3-202ENST00000308298 SPATA8Q6RVD6 105 aa10.44□□□□□ -0.74
SSH3-202ENST00000308298 MIR22HGQ0VDD5 57 aa10.39□□□□□ -0.75
SSH3-202ENST00000308298 BIRC6Q9NR09 4857 aa10.37□□□□□ -0.75
SSH3-202ENST00000308298 RBM12B-AS1Q9P1G2 102 aa10.36□□□□□ -0.75
SSH3-202ENST00000308298 ABCA13Q86UQ4 5058 aa10.28□□□□□ -0.76
SSH3-202ENST00000308298 HERC2O95714 4834 aa10.28□□□□□ -0.76
SSH3-202ENST00000308298 LRP2P98164 4655 aa10.24□□□□□ -0.77
SSH3-202ENST00000308298 J3QL48 77 aa10.21□□□□□ -0.78
SSH3-202ENST00000308298 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
SSH3-202ENST00000308298 LPAP08519 4548 aa10.19□□□□□ -0.78
SSH3-202ENST00000308298 S4R3F8 94 aa10.19□□□□□ -0.78
SSH3-202ENST00000308298 H1FX-AS1Q4G0G2 97 aa10.14□□□□□ -0.79
SSH3-202ENST00000308298 A0A1B0GU33 70 aa10.12□□□□□ -0.79
SSH3-202ENST00000308298 H0YAA0 97 aa10.07□□□□□ -0.8
SSH3-202ENST00000308298 SEC61BP60468 96 aaKnown RBP10.06□□□□□ -0.8
SSH3-202ENST00000308298 PRAC1Q96KF2 57 aa10.02□□□□□ -0.81
SSH3-202ENST00000308298 ADM2Q7Z4H4 148 aa10□□□□□ -0.81
SSH3-202ENST00000308298 KRTAP10-6P60371 365 aaPredicted RBP9.98□□□□□ -0.81
SSH3-202ENST00000308298 KRTAP3-2Q9BYR7 98 aa9.94□□□□□ -0.82
SSH3-202ENST00000308298 CSAG1Q6PB30 78 aa9.89□□□□□ -0.83
SSH3-202ENST00000308298 MUC17Q685J3 4493 aa9.88□□□□□ -0.83
SSH3-202ENST00000308298 KRTAP4-1Q9BYQ7 146 aa9.85□□□□□ -0.83
SSH3-202ENST00000308298 P0C880 135 aa9.83□□□□□ -0.84
SSH3-202ENST00000308298 K7ERS5 55 aa9.82□□□□□ -0.84
SSH3-202ENST00000308298 LINC01554Q52M75 96 aa9.82□□□□□ -0.84
SSH3-202ENST00000308298 PCLOQ9Y6V0 5065 aa9.8□□□□□ -0.84
SSH3-202ENST00000308298 KRTAP13-4Q3LI77 160 aa9.79□□□□□ -0.84
SSH3-202ENST00000308298 A0A0D9SG42 100 aa9.66□□□□□ -0.86
SSH3-202ENST00000308298 KRTAP19-2Q3LHN2 52 aa9.66□□□□□ -0.86
SSH3-202ENST00000308298 HERC1Q15751 4861 aa9.6□□□□□ -0.87
SSH3-202ENST00000308298 HMCN2Q8NDA2 5059 aa9.58□□□□□ -0.88
SSH3-202ENST00000308298 M0QZ58 72 aa9.57□□□□□ -0.88
SSH3-202ENST00000308298 KRTAP25-1Q3LHN0 102 aa9.57□□□□□ -0.88
SSH3-202ENST00000308298 ROMO1P60602 79 aa9.5□□□□□ -0.89
SSH3-202ENST00000308298 KRTAP12-2P59991 146 aa9.44□□□□□ -0.9
SSH3-202ENST00000308298 MUC2Q02817 5179 aa9.44□□□□□ -0.9
SSH3-202ENST00000308298 KRTAP12-1P59990 96 aa9.43□□□□□ -0.9
SSH3-202ENST00000308298 R4GN34 69 aa9.42□□□□□ -0.9
SSH3-202ENST00000308298 FLGP20930 4061 aaPredicted RBP9.4□□□□□ -0.9
SSH3-202ENST00000308298 SPINT4Q6UDR6 99 aa9.39□□□□□ -0.91
SSH3-202ENST00000308298 LORP23490 312 aaPredicted RBP9.35□□□□□ -0.91
SSH3-202ENST00000308298 CRIPTQ9P021 101 aa9.29□□□□□ -0.92
SSH3-202ENST00000308298 LCE2CQ5TA81 110 aa9.24□□□□□ -0.93
SSH3-202ENST00000308298 RNF213Q63HN8 5207 aa9.14□□□□□ -0.95
SSH3-202ENST00000308298 H3BS24 57 aa9.11□□□□□ -0.95
SSH3-202ENST00000308298 UBR4Q5T4S7 5183 aa9.11□□□□□ -0.95
SSH3-202ENST00000308298 FAT4Q6V0I7 4981 aa9.03□□□□□ -0.96
SSH3-202ENST00000308298 MT1HP80294 61 aa9.02□□□□□ -0.97
SSH3-202ENST00000308298 C10orf95Q9H7T3 257 aa9.02□□□□□ -0.97
SSH3-202ENST00000308298 M0R2T5 61 aa9□□□□□ -0.97
SSH3-202ENST00000308298 CAMK2N1Q7Z7J9 78 aa8.88□□□□□ -0.99
SSH3-202ENST00000308298 SPRR2GQ9BYE4 73 aa8.83□□□□□ -1
SSH3-202ENST00000308298 MT2AP02795 61 aa8.78□□□□□ -1
SSH3-202ENST00000308298 KRTAP19-1Q8IUB9 90 aa8.77□□□□□ -1.01
SSH3-202ENST00000308298 KRTAP9-8Q9BYQ0 159 aa8.76□□□□□ -1.01
SSH3-202ENST00000308298 MT1FP04733 61 aa8.75□□□□□ -1.01
SSH3-202ENST00000308298 KRTAP10-10P60014 251 aa8.74□□□□□ -1.01
SSH3-202ENST00000308298 KRTAP15-1Q3LI76 137 aa8.72□□□□□ -1.01
SSH3-202ENST00000308298 PLAC4Q8WY50 150 aa8.64□□□□□ -1.03
SSH3-202ENST00000308298 PP632Q6XCG6 107 aa8.53□□□□□ -1.04
SSH3-202ENST00000308298 TNP1P09430 55 aa8.52□□□□□ -1.05
SSH3-202ENST00000308298 KRTAP19-8Q3LI54 63 aa8.51□□□□□ -1.05
SSH3-202ENST00000308298 NDUFAF8A1L188 74 aa8.47□□□□□ -1.05
SSH3-202ENST00000308298 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.06
SSH3-202ENST00000308298 KRTAP9-3Q9BYQ3 159 aa8.41□□□□□ -1.06
SSH3-202ENST00000308298 MT1BP07438 61 aa8.39□□□□□ -1.07
SSH3-202ENST00000308298 KRTAP23-1A1A580 65 aa8.36□□□□□ -1.07
SSH3-202ENST00000308298 KRTAP10-5P60370 271 aa8.22□□□□□ -1.09
SSH3-202ENST00000308298 MT1XP80297 61 aa8.22□□□□□ -1.09
SSH3-202ENST00000308298 LCE2BO14633 110 aa8.12□□□□□ -1.11
SSH3-202ENST00000308298 LCE3AQ5TA76 89 aa8.1□□□□□ -1.11
SSH3-202ENST00000308298 LUZP6Q538Z0 58 aa8.05□□□□□ -1.12
SSH3-202ENST00000308298 PRO2289Q9P1D8 64 aa8.05□□□□□ -1.12
SSH3-202ENST00000308298 KRTAP10-12P60413 245 aa7.95□□□□□ -1.14
SSH3-202ENST00000308298 KRTAP10-7P60409 375 aaPredicted RBP7.93□□□□□ -1.14
SSH3-202ENST00000308298 KRTAP8-1Q8IUC2 63 aa7.93□□□□□ -1.14
SSH3-202ENST00000308298 SPRR5A0A1B0GTR4 108 aa7.83□□□□□ -1.16
SSH3-202ENST00000308298 USH2AO75445 5202 aa7.81□□□□□ -1.16
SSH3-202ENST00000308298 KRTAP12-3P60328 96 aa7.74□□□□□ -1.17
SSH3-202ENST00000308298 LCE2DQ5TA82 110 aaPredicted RBP7.62□□□□□ -1.19
SSH3-202ENST00000308298 A0A0A0MQY5 61 aa7.59□□□□□ -1.19
SSH3-202ENST00000308298 SSPOA2VEC9 5147 aa7.56□□□□□ -1.2
SSH3-202ENST00000308298 KRTAP19-5Q3LI72 72 aa7.55□□□□□ -1.2
SSH3-202ENST00000308298 KRTAP19-6Q3LI70 58 aa7.52□□□□□ -1.2
SSH3-202ENST00000308298 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
SSH3-202ENST00000308298 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
SSH3-202ENST00000308298 KMT2DO14686 5537 aa7.47□□□□□ -1.21
SSH3-202ENST00000308298 KRTAP19-7Q3SYF9 63 aa7.34□□□□□ -1.24
SSH3-202ENST00000308298 FSIP2Q5CZC0 6907 aa7.28□□□□□ -1.24
SSH3-202ENST00000308298 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
SSH3-202ENST00000308298 KRTAP9-2Q9BYQ4 174 aa7.18□□□□□ -1.26
SSH3-202ENST00000308298 MT1EP04732 61 aa7.17□□□□□ -1.26
SSH3-202ENST00000308298 FCGBPQ9Y6R7 5405 aaPredicted RBP7.11□□□□□ -1.27
SSH3-202ENST00000308298 KRTAP19-4Q3LI73 84 aa7.1□□□□□ -1.27
SSH3-202ENST00000308298 MT1LQ93083 61 aa7.1□□□□□ -1.27
SSH3-202ENST00000308298 KRTAP4-7Q9BYR0 210 aa6.98□□□□□ -1.29
SSH3-202ENST00000308298 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
SSH3-202ENST00000308298 KRTAP9-6A8MVA2 160 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms