RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 TPRXLQ17RH7 258 aa5.73□□□□□ -1.49
MSRB3-201ENST00000308259 KRTAP1-4P0C5Y4 121 aa5.7□□□□□ -1.5
MSRB3-201ENST00000308259 RPS29P62273 56 aaKnown RBP5.68□□□□□ -1.5
MSRB3-201ENST00000308259 A0A1B0GVY2 172 aa5.66□□□□□ -1.5
MSRB3-201ENST00000308259 FAT1Q14517 4588 aa5.66□□□□□ -1.5
MSRB3-201ENST00000308259 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.51
MSRB3-201ENST00000308259 PLAC4Q8WY50 150 aa5.63□□□□□ -1.51
MSRB3-201ENST00000308259 DYNC1H1Q14204 4646 aaKnown RBP5.56□□□□□ -1.52
MSRB3-201ENST00000308259 S4R3F8 94 aa5.55□□□□□ -1.52
MSRB3-201ENST00000308259 SACSQ9NZJ4 4579 aa5.55□□□□□ -1.52
MSRB3-201ENST00000308259 MYCBP2O75592 4640 aa5.46□□□□□ -1.54
MSRB3-201ENST00000308259 LRP1Q07954 4544 aaKnown RBP5.45□□□□□ -1.54
MSRB3-201ENST00000308259 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
MSRB3-201ENST00000308259 APOBP04114 4563 aaKnown RBP5.45□□□□□ -1.54
MSRB3-201ENST00000308259 KRTAP10-8P60410 259 aa5.44□□□□□ -1.54
MSRB3-201ENST00000308259 KMT2CQ8NEZ4 4911 aaKnown RBP5.4□□□□□ -1.54
MSRB3-201ENST00000308259 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
MSRB3-201ENST00000308259 KRTAP13-4Q3LI77 160 aa5.39□□□□□ -1.55
MSRB3-201ENST00000308259 R4GN34 69 aa5.38□□□□□ -1.55
MSRB3-201ENST00000308259 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
MSRB3-201ENST00000308259 HSPG2P98160 4391 aa5.36□□□□□ -1.55
MSRB3-201ENST00000308259 M0R2T5 61 aa5.35□□□□□ -1.55
MSRB3-201ENST00000308259 KRTAP10-4P60372 401 aaPredicted RBP5.34□□□□□ -1.55
MSRB3-201ENST00000308259 M0QZ58 72 aa5.33□□□□□ -1.56
MSRB3-201ENST00000308259 RYR2Q92736 4967 aa5.3□□□□□ -1.56
MSRB3-201ENST00000308259 FAT3Q8TDW7 4589 aa5.3□□□□□ -1.56
MSRB3-201ENST00000308259 TNXBP22105 4242 aa5.27□□□□□ -1.57
MSRB3-201ENST00000308259 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
MSRB3-201ENST00000308259 LPAP08519 4548 aa5.25□□□□□ -1.57
MSRB3-201ENST00000308259 KRTAP12-1P59990 96 aa5.23□□□□□ -1.57
MSRB3-201ENST00000308259 XP32Q5T750 250 aa5.22□□□□□ -1.57
MSRB3-201ENST00000308259 KRTAP3-3Q9BYR6 98 aa5.18□□□□□ -1.58
MSRB3-201ENST00000308259 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
MSRB3-201ENST00000308259 RYR3Q15413 4870 aa5.17□□□□□ -1.58
MSRB3-201ENST00000308259 KRTAP17-1Q9BYP8 105 aa5.17□□□□□ -1.58
MSRB3-201ENST00000308259 KIAA1109Q2LD37 5005 aa5.16□□□□□ -1.58
MSRB3-201ENST00000308259 LRP2P98164 4655 aa5.15□□□□□ -1.59
MSRB3-201ENST00000308259 KRTAP3-2Q9BYR7 98 aa5.11□□□□□ -1.59
MSRB3-201ENST00000308259 MT1HL1P0DM35 61 aa5.11□□□□□ -1.59
MSRB3-201ENST00000308259 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
MSRB3-201ENST00000308259 RYR1P21817 5038 aa5.1□□□□□ -1.59
MSRB3-201ENST00000308259 ABCA13Q86UQ4 5058 aa5.04□□□□□ -1.6
MSRB3-201ENST00000308259 KRTAP4-5Q9BYR2 181 aa5.03□□□□□ -1.6
MSRB3-201ENST00000308259 EPPK1P58107 5090 aaKnown RBP5.01□□□□□ -1.61
MSRB3-201ENST00000308259 TNP1P09430 55 aa4.96□□□□□ -1.62
MSRB3-201ENST00000308259 INE1O15225 51 aa4.95□□□□□ -1.62
MSRB3-201ENST00000308259 MUC2Q02817 5179 aa4.87□□□□□ -1.63
MSRB3-201ENST00000308259 LORP23490 312 aaPredicted RBP4.82□□□□□ -1.64
MSRB3-201ENST00000308259 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
MSRB3-201ENST00000308259 KRTAP10-10P60014 251 aa4.77□□□□□ -1.65
MSRB3-201ENST00000308259 KRTAP4-1Q9BYQ7 146 aa4.77□□□□□ -1.65
MSRB3-201ENST00000308259 MUC17Q685J3 4493 aa4.76□□□□□ -1.65
MSRB3-201ENST00000308259 HERC2O95714 4834 aa4.73□□□□□ -1.65
MSRB3-201ENST00000308259 BIRC6Q9NR09 4857 aa4.69□□□□□ -1.66
MSRB3-201ENST00000308259 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
MSRB3-201ENST00000308259 HERC1Q15751 4861 aa4.61□□□□□ -1.67
MSRB3-201ENST00000308259 FAT4Q6V0I7 4981 aa4.6□□□□□ -1.67
MSRB3-201ENST00000308259 PCLOQ9Y6V0 5065 aa4.58□□□□□ -1.68
MSRB3-201ENST00000308259 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
MSRB3-201ENST00000308259 FLGP20930 4061 aaPredicted RBP4.53□□□□□ -1.68
MSRB3-201ENST00000308259 RNF213Q63HN8 5207 aa4.48□□□□□ -1.69
MSRB3-201ENST00000308259 HMCN2Q8NDA2 5059 aa4.4□□□□□ -1.7
MSRB3-201ENST00000308259 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
MSRB3-201ENST00000308259 UBR4Q5T4S7 5183 aa4.37□□□□□ -1.71
MSRB3-201ENST00000308259 MT1HP80294 61 aa4.36□□□□□ -1.71
MSRB3-201ENST00000308259 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
MSRB3-201ENST00000308259 LCE2CQ5TA81 110 aa4.29□□□□□ -1.72
MSRB3-201ENST00000308259 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
MSRB3-201ENST00000308259 LCE2BO14633 110 aa4.23□□□□□ -1.73
MSRB3-201ENST00000308259 MT2AP02795 61 aa4.22□□□□□ -1.73
MSRB3-201ENST00000308259 MT1FP04733 61 aa4.19□□□□□ -1.74
MSRB3-201ENST00000308259 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
MSRB3-201ENST00000308259 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
MSRB3-201ENST00000308259 KRTAP9-8Q9BYQ0 159 aa4.09□□□□□ -1.75
MSRB3-201ENST00000308259 USH2AO75445 5202 aa4.06□□□□□ -1.76
MSRB3-201ENST00000308259 KMT2DO14686 5537 aa4.02□□□□□ -1.77
MSRB3-201ENST00000308259 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
MSRB3-201ENST00000308259 MT1BP07438 61 aa4.01□□□□□ -1.77
MSRB3-201ENST00000308259 KRTAP10-5P60370 271 aa4.01□□□□□ -1.77
MSRB3-201ENST00000308259 MT1XP80297 61 aa4.01□□□□□ -1.77
MSRB3-201ENST00000308259 KRTAP19-8Q3LI54 63 aa3.98□□□□□ -1.77
MSRB3-201ENST00000308259 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
MSRB3-201ENST00000308259 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
MSRB3-201ENST00000308259 LCE2AQ5TA79 106 aaPredicted RBP3.94□□□□□ -1.78
MSRB3-201ENST00000308259 KRTAP9-3Q9BYQ3 159 aa3.91□□□□□ -1.78
MSRB3-201ENST00000308259 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
MSRB3-201ENST00000308259 KRTAP9-6A0A140TA67 174 aa3.87□□□□□ -1.79
MSRB3-201ENST00000308259 CRCT1Q9UGL9 99 aa3.86□□□□□ -1.79
MSRB3-201ENST00000308259 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
MSRB3-201ENST00000308259 KRTAP4-8A0A0G2JLE6 195 aa3.79□□□□□ -1.8
MSRB3-201ENST00000308259 KRTAP4-8Q9BYQ9 185 aa3.79□□□□□ -1.8
MSRB3-201ENST00000308259 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
MSRB3-201ENST00000308259 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
MSRB3-201ENST00000308259 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
MSRB3-201ENST00000308259 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
MSRB3-201ENST00000308259 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.81
MSRB3-201ENST00000308259 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
MSRB3-201ENST00000308259 SPRR2FQ96RM1 72 aa3.7□□□□□ -1.82
MSRB3-201ENST00000308259 KRTAP4-7Q9BYR0 210 aa3.69□□□□□ -1.82
MSRB3-201ENST00000308259 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms