RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 ATOX1O00244 68 aa7.65□□□□□ -1.18
HMGCLL1-202ENST00000308161 KLKP1Q107X0 134 aa7.65□□□□□ -1.18
HMGCLL1-202ENST00000308161 SPRR2GQ9BYE4 73 aa7.64□□□□□ -1.19
HMGCLL1-202ENST00000308161 MT1BP07438 61 aa7.63□□□□□ -1.19
HMGCLL1-202ENST00000308161 LINC00643Q86TS7 51 aa7.63□□□□□ -1.19
HMGCLL1-202ENST00000308161 A6NN06 94 aa7.6□□□□□ -1.19
HMGCLL1-202ENST00000308161 KRTAP19-8Q3LI54 63 aa7.59□□□□□ -1.19
HMGCLL1-202ENST00000308161 A0A1B0GV90 55 aa7.58□□□□□ -1.2
HMGCLL1-202ENST00000308161 LINC00208Q96KT6 92 aa7.57□□□□□ -1.2
HMGCLL1-202ENST00000308161 NDUFC1O43677 76 aa7.56□□□□□ -1.2
HMGCLL1-202ENST00000308161 IMUPQ9GZP8 106 aa7.54□□□□□ -1.2
HMGCLL1-202ENST00000308161 KRTAP6-3Q3LI67 103 aa7.53□□□□□ -1.2
HMGCLL1-202ENST00000308161 MP68P56378 58 aa7.52□□□□□ -1.21
HMGCLL1-202ENST00000308161 CRIPTQ9P021 101 aa7.52□□□□□ -1.21
HMGCLL1-202ENST00000308161 A8MUN3 132 aa7.5□□□□□ -1.21
HMGCLL1-202ENST00000308161 OCR1Q9BZK8 76 aa7.49□□□□□ -1.21
HMGCLL1-202ENST00000308161 KRTAP10-5P60370 271 aa7.46□□□□□ -1.22
HMGCLL1-202ENST00000308161 ADM2Q7Z4H4 148 aa7.45□□□□□ -1.22
HMGCLL1-202ENST00000308161 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
HMGCLL1-202ENST00000308161 H0YAA0 97 aa7.43□□□□□ -1.22
HMGCLL1-202ENST00000308161 J3QR89 54 aa7.43□□□□□ -1.22
HMGCLL1-202ENST00000308161 SCGB1A1P11684 91 aa7.39□□□□□ -1.23
HMGCLL1-202ENST00000308161 NEBP20929 6669 aa7.36□□□□□ -1.23
HMGCLL1-202ENST00000308161 H3BPC8 53 aa7.34□□□□□ -1.23
HMGCLL1-202ENST00000308161 H3BS24 57 aa7.28□□□□□ -1.24
HMGCLL1-202ENST00000308161 DMAC1Q96GE9 116 aa7.28□□□□□ -1.24
HMGCLL1-202ENST00000308161 MUC12Q9UKN1 5478 aa7.28□□□□□ -1.24
HMGCLL1-202ENST00000308161 P0C880 135 aa7.26□□□□□ -1.25
HMGCLL1-202ENST00000308161 R4GN34 69 aa7.26□□□□□ -1.25
HMGCLL1-202ENST00000308161 C20orf197Q8N268 126 aa7.24□□□□□ -1.25
HMGCLL1-202ENST00000308161 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
HMGCLL1-202ENST00000308161 M0QZ58 72 aa7.22□□□□□ -1.25
HMGCLL1-202ENST00000308161 PRO2289Q9P1D8 64 aa7.2□□□□□ -1.26
HMGCLL1-202ENST00000308161 MT-ATP8P03928 68 aa7.19□□□□□ -1.26
HMGCLL1-202ENST00000308161 KRTAP5-9P26371 169 aa7.16□□□□□ -1.26
HMGCLL1-202ENST00000308161 LINC01554Q52M75 96 aa7.16□□□□□ -1.26
HMGCLL1-202ENST00000308161 MT1XP80297 61 aa7.15□□□□□ -1.26
HMGCLL1-202ENST00000308161 TRAV7A0A075B6U4 112 aa7.13□□□□□ -1.27
HMGCLL1-202ENST00000308161 KMT2DO14686 5537 aa7.13□□□□□ -1.27
HMGCLL1-202ENST00000308161 K7ERU9 68 aa7.12□□□□□ -1.27
HMGCLL1-202ENST00000308161 ACYP2P14621 99 aa7.12□□□□□ -1.27
HMGCLL1-202ENST00000308161 KRTAP4-12Q9BQ66 201 aa7.12□□□□□ -1.27
HMGCLL1-202ENST00000308161 SMIM20Q8N5G0 67 aa7.1□□□□□ -1.27
HMGCLL1-202ENST00000308161 MDN1Q9NU22 5596 aa7.09□□□□□ -1.27
HMGCLL1-202ENST00000308161 LCE3BQ5TA77 95 aa7.08□□□□□ -1.28
HMGCLL1-202ENST00000308161 CHKB-CPT1BH3BT56 60 aa7.05□□□□□ -1.28
HMGCLL1-202ENST00000308161 SPTSSBQ8NFR3 76 aa7.05□□□□□ -1.28
HMGCLL1-202ENST00000308161 SNURFQ9Y675 71 aa7.04□□□□□ -1.28
HMGCLL1-202ENST00000308161 KRTAP20-1Q3LI63 56 aa7.03□□□□□ -1.28
HMGCLL1-202ENST00000308161 SPRR2FQ96RM1 72 aa7.02□□□□□ -1.28
HMGCLL1-202ENST00000308161 KRTAP8-1Q8IUC2 63 aa6.99□□□□□ -1.29
HMGCLL1-202ENST00000308161 KRTAP12-2P59991 146 aa6.95□□□□□ -1.3
HMGCLL1-202ENST00000308161 SPRR2EP22531 72 aa6.93□□□□□ -1.3
HMGCLL1-202ENST00000308161 SPRR2BP35325 72 aa6.93□□□□□ -1.3
HMGCLL1-202ENST00000308161 SPRR2AP35326 72 aa6.93□□□□□ -1.3
HMGCLL1-202ENST00000308161 KRTAP9-9Q9BYP9 154 aa6.91□□□□□ -1.3
HMGCLL1-202ENST00000308161 KRTAP9-4Q9BYQ2 154 aa6.91□□□□□ -1.3
HMGCLL1-202ENST00000308161 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
HMGCLL1-202ENST00000308161 SERP2Q8N6R1 65 aa6.87□□□□□ -1.31
HMGCLL1-202ENST00000308161 SPANXA2-OT1Q8N9U9 137 aa6.87□□□□□ -1.31
HMGCLL1-202ENST00000308161 KRTAP10-7P60409 375 aaPredicted RBP6.85□□□□□ -1.31
HMGCLL1-202ENST00000308161 KRTAP2-3P0C7H8 128 aa6.81□□□□□ -1.32
HMGCLL1-202ENST00000308161 KRTAP2-4Q9BYR9 128 aa6.81□□□□□ -1.32
HMGCLL1-202ENST00000308161 LCE1AQ5T7P2 110 aa6.78□□□□□ -1.32
HMGCLL1-202ENST00000308161 KRTAP10-12P60413 245 aa6.77□□□□□ -1.32
HMGCLL1-202ENST00000308161 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
HMGCLL1-202ENST00000308161 COA5Q86WW8 74 aa6.75□□□□□ -1.33
HMGCLL1-202ENST00000308161 SPRR2DP22532 72 aa6.7□□□□□ -1.34
HMGCLL1-202ENST00000308161 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
HMGCLL1-202ENST00000308161 SEC61GP60059 68 aa6.65□□□□□ -1.35
HMGCLL1-202ENST00000308161 COX7CP15954 63 aa6.64□□□□□ -1.35
HMGCLL1-202ENST00000308161 SERP1Q9Y6X1 66 aa6.64□□□□□ -1.35
HMGCLL1-202ENST00000308161 LCE1DQ5T752 114 aa6.63□□□□□ -1.35
HMGCLL1-202ENST00000308161 A0A0D9SG42 100 aa6.62□□□□□ -1.35
HMGCLL1-202ENST00000308161 KRTAP2-2Q9BYT5 123 aa6.59□□□□□ -1.35
HMGCLL1-202ENST00000308161 KRTAP2-1Q9BYU5 128 aa6.59□□□□□ -1.35
HMGCLL1-202ENST00000308161 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
HMGCLL1-202ENST00000308161 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
HMGCLL1-202ENST00000308161 SPATA8Q6RVD6 105 aa6.56□□□□□ -1.36
HMGCLL1-202ENST00000308161 H7BZZ5 65 aa6.55□□□□□ -1.36
HMGCLL1-202ENST00000308161 A0A1B0GU33 70 aa6.51□□□□□ -1.37
HMGCLL1-202ENST00000308161 SPINT4Q6UDR6 99 aa6.51□□□□□ -1.37
HMGCLL1-202ENST00000308161 SVIPQ8NHG7 77 aa6.49□□□□□ -1.37
HMGCLL1-202ENST00000308161 KRTAP4-9Q9BYQ8 210 aa6.44□□□□□ -1.38
HMGCLL1-202ENST00000308161 ANAPC13Q9BS18 74 aa6.42□□□□□ -1.38
HMGCLL1-202ENST00000308161 A0A1B0GU69 56 aa6.41□□□□□ -1.38
HMGCLL1-202ENST00000308161 KRTAP12-1P59990 96 aa6.41□□□□□ -1.38
HMGCLL1-202ENST00000308161 LCE4AQ5TA78 99 aa6.39□□□□□ -1.39
HMGCLL1-202ENST00000308161 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
HMGCLL1-202ENST00000308161 MT1EP04732 61 aa6.34□□□□□ -1.39
HMGCLL1-202ENST00000308161 SMIM26A0A096LP01 95 aa6.33□□□□□ -1.4
HMGCLL1-202ENST00000308161 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
HMGCLL1-202ENST00000308161 A8MU10 97 aa6.32□□□□□ -1.4
HMGCLL1-202ENST00000308161 CCDC179H3BU77 68 aa6.29□□□□□ -1.4
HMGCLL1-202ENST00000308161 LCE5AQ5TCM9 118 aa6.29□□□□□ -1.4
HMGCLL1-202ENST00000308161 KRTAP19-3Q7Z4W3 81 aa6.29□□□□□ -1.4
HMGCLL1-202ENST00000308161 KRTAP4-2Q9BYR5 136 aa6.29□□□□□ -1.4
HMGCLL1-202ENST00000308161 DSTQ03001 7570 aaKnown RBP6.27□□□□□ -1.41
HMGCLL1-202ENST00000308161 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
HMGCLL1-202ENST00000308161 KRTAP4-11Q9BYQ6 195 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms