RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ACYP2P14621 99 aa3.51□□□□□ -1.85
USP47-201ENST00000305481 Q75L30 129 aa3.5□□□□□ -1.85
USP47-201ENST00000305481 ABCA13Q86UQ4 5058 aa3.47□□□□□ -1.85
USP47-201ENST00000305481 XP32Q5T750 250 aa3.46□□□□□ -1.86
USP47-201ENST00000305481 CSAG1Q6PB30 78 aa3.46□□□□□ -1.86
USP47-201ENST00000305481 BIRC6Q9NR09 4857 aa3.46□□□□□ -1.86
USP47-201ENST00000305481 KRTAP3-1Q9BYR8 98 aa3.46□□□□□ -1.86
USP47-201ENST00000305481 LINC01558Q9Y6Z2 57 aa3.46□□□□□ -1.86
USP47-201ENST00000305481 RPL37P61927 97 aaKnown RBP3.45□□□□□ -1.86
USP47-201ENST00000305481 LPAP08519 4548 aa3.42□□□□□ -1.86
USP47-201ENST00000305481 LRP2P98164 4655 aa3.42□□□□□ -1.86
USP47-201ENST00000305481 HERC2O95714 4834 aa3.41□□□□□ -1.86
USP47-201ENST00000305481 P0C880 135 aa3.41□□□□□ -1.86
USP47-201ENST00000305481 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
USP47-201ENST00000305481 ROMO1P60602 79 aa3.38□□□□□ -1.87
USP47-201ENST00000305481 COX6B2Q6YFQ2 88 aa3.38□□□□□ -1.87
USP47-201ENST00000305481 A0A1B0GU69 56 aa3.36□□□□□ -1.87
USP47-201ENST00000305481 KRTAP3-3Q9BYR6 98 aa3.34□□□□□ -1.88
USP47-201ENST00000305481 KRTAP3-2Q9BYR7 98 aa3.34□□□□□ -1.88
USP47-201ENST00000305481 J3QL48 77 aa3.32□□□□□ -1.88
USP47-201ENST00000305481 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
USP47-201ENST00000305481 PCLOQ9Y6V0 5065 aa3.31□□□□□ -1.88
USP47-201ENST00000305481 MUC17Q685J3 4493 aa3.28□□□□□ -1.89
USP47-201ENST00000305481 SPATA8Q6RVD6 105 aa3.27□□□□□ -1.89
USP47-201ENST00000305481 HERC1Q15751 4861 aa3.27□□□□□ -1.89
USP47-201ENST00000305481 UQCR11O14957 56 aa3.27□□□□□ -1.89
USP47-201ENST00000305481 H1FX-AS1Q4G0G2 97 aa3.27□□□□□ -1.89
USP47-201ENST00000305481 CRIPTQ9P021 101 aa3.27□□□□□ -1.89
USP47-201ENST00000305481 KRTAP4-1Q9BYQ7 146 aa3.26□□□□□ -1.89
USP47-201ENST00000305481 S4R3F8 94 aa3.26□□□□□ -1.89
USP47-201ENST00000305481 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
USP47-201ENST00000305481 SEC61BP60468 96 aaKnown RBP3.25□□□□□ -1.89
USP47-201ENST00000305481 H0YAA0 97 aa3.23□□□□□ -1.89
USP47-201ENST00000305481 KRTAP10-6P60371 365 aaPredicted RBP3.23□□□□□ -1.89
USP47-201ENST00000305481 KRTAP25-1Q3LHN0 102 aa3.23□□□□□ -1.89
USP47-201ENST00000305481 A0A1B0GU33 70 aa3.22□□□□□ -1.89
USP47-201ENST00000305481 MUC2Q02817 5179 aa3.22□□□□□ -1.89
USP47-201ENST00000305481 HMCN2Q8NDA2 5059 aa3.22□□□□□ -1.89
USP47-201ENST00000305481 KRTAP19-2Q3LHN2 52 aa3.2□□□□□ -1.9
USP47-201ENST00000305481 KRTAP13-4Q3LI77 160 aa3.17□□□□□ -1.9
USP47-201ENST00000305481 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
USP47-201ENST00000305481 FLGP20930 4061 aaPredicted RBP3.12□□□□□ -1.91
USP47-201ENST00000305481 SPINT4Q6UDR6 99 aa3.1□□□□□ -1.91
USP47-201ENST00000305481 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
USP47-201ENST00000305481 A0A0D9SG42 100 aa3.09□□□□□ -1.91
USP47-201ENST00000305481 UBR4Q5T4S7 5183 aa3.09□□□□□ -1.91
USP47-201ENST00000305481 FAT4Q6V0I7 4981 aa3.07□□□□□ -1.92
USP47-201ENST00000305481 LCE2CQ5TA81 110 aa3.07□□□□□ -1.92
USP47-201ENST00000305481 LORP23490 312 aaPredicted RBP3.06□□□□□ -1.92
USP47-201ENST00000305481 M0QZ58 72 aa3.06□□□□□ -1.92
USP47-201ENST00000305481 RNF213Q63HN8 5207 aa3.05□□□□□ -1.92
USP47-201ENST00000305481 KRTAP12-2P59991 146 aa3.05□□□□□ -1.92
USP47-201ENST00000305481 K7ERS5 55 aa3.03□□□□□ -1.92
USP47-201ENST00000305481 KRTAP12-1P59990 96 aa3.03□□□□□ -1.92
USP47-201ENST00000305481 C10orf95Q9H7T3 257 aa3.01□□□□□ -1.93
USP47-201ENST00000305481 R4GN34 69 aa3.01□□□□□ -1.93
USP47-201ENST00000305481 MT1HP80294 61 aa2.98□□□□□ -1.93
USP47-201ENST00000305481 M0R2T5 61 aa2.92□□□□□ -1.94
USP47-201ENST00000305481 LCE2BO14633 110 aa2.9□□□□□ -1.95
USP47-201ENST00000305481 KRTAP9-8Q9BYQ0 159 aa2.9□□□□□ -1.95
USP47-201ENST00000305481 MT2AP02795 61 aa2.89□□□□□ -1.95
USP47-201ENST00000305481 MT1FP04733 61 aa2.88□□□□□ -1.95
USP47-201ENST00000305481 KRTAP19-1Q8IUB9 90 aa2.88□□□□□ -1.95
USP47-201ENST00000305481 SPRR2GQ9BYE4 73 aa2.88□□□□□ -1.95
USP47-201ENST00000305481 KRTAP10-10P60014 251 aa2.85□□□□□ -1.95
USP47-201ENST00000305481 CAMK2N1Q7Z7J9 78 aa2.83□□□□□ -1.96
USP47-201ENST00000305481 LCE2AQ5TA79 106 aaPredicted RBP2.8□□□□□ -1.96
USP47-201ENST00000305481 KRTAP19-8Q3LI54 63 aa2.78□□□□□ -1.96
USP47-201ENST00000305481 KRTAP9-3Q9BYQ3 159 aa2.78□□□□□ -1.96
USP47-201ENST00000305481 PLAC4Q8WY50 150 aa2.77□□□□□ -1.97
USP47-201ENST00000305481 MT1BP07438 61 aa2.75□□□□□ -1.97
USP47-201ENST00000305481 TNP1P09430 55 aa2.71□□□□□ -1.98
USP47-201ENST00000305481 KRTAP10-5P60370 271 aa2.7□□□□□ -1.98
USP47-201ENST00000305481 MT1XP80297 61 aa2.7□□□□□ -1.98
USP47-201ENST00000305481 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
USP47-201ENST00000305481 USH2AO75445 5202 aa2.66□□□□□ -1.98
USP47-201ENST00000305481 KRTAP23-1A1A580 65 aa2.65□□□□□ -1.98
USP47-201ENST00000305481 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
USP47-201ENST00000305481 PRO2289Q9P1D8 64 aa2.61□□□□□ -1.99
USP47-201ENST00000305481 KRTAP10-7P60409 375 aaPredicted RBP2.6□□□□□ -1.99
USP47-201ENST00000305481 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
USP47-201ENST00000305481 KRTAP10-12P60413 245 aa2.56□□□□□ -2
USP47-201ENST00000305481 KRTAP9-6A0A140TA67 174 aa2.55□□□□□ -2
USP47-201ENST00000305481 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
USP47-201ENST00000305481 KRTAP9-2Q9BYQ4 174 aa2.55□□□□□ -2
USP47-201ENST00000305481 SSPOA2VEC9 5147 aa2.53□□□□□ -2.01
USP47-201ENST00000305481 KMT2DO14686 5537 aa2.53□□□□□ -2.01
USP47-201ENST00000305481 FSIP2Q5CZC0 6907 aa2.51□□□□□ -2.01
USP47-201ENST00000305481 LOC100996750A0A140TA64 210 aa2.5□□□□□ -2.01
USP47-201ENST00000305481 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
USP47-201ENST00000305481 KRTAP12-3P60328 96 aa2.49□□□□□ -2.01
USP47-201ENST00000305481 KRTAP4-8A0A0G2JLE6 195 aa2.49□□□□□ -2.01
USP47-201ENST00000305481 KRTAP4-8Q9BYQ9 185 aa2.49□□□□□ -2.01
USP47-201ENST00000305481 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
USP47-201ENST00000305481 KRTAP19-6Q3LI70 58 aa2.46□□□□□ -2.01
USP47-201ENST00000305481 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.02
USP47-201ENST00000305481 KRTAP19-7Q3SYF9 63 aa2.41□□□□□ -2.02
USP47-201ENST00000305481 FCGBPQ9Y6R7 5405 aaPredicted RBP2.39□□□□□ -2.03
USP47-201ENST00000305481 INE1O15225 51 aa2.38□□□□□ -2.03
USP47-201ENST00000305481 CRCT1Q9UGL9 99 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms