RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 SPRR1AP35321 89 aa3.26□□□□□ -1.89
ZNF440-201ENST00000304060 KRTAP11-1Q8IUC1 163 aa3.26□□□□□ -1.89
ZNF440-201ENST00000304060 ROMO1P60602 79 aa3.26□□□□□ -1.89
ZNF440-201ENST00000304060 Q8N377 158 aa3.26□□□□□ -1.89
ZNF440-201ENST00000304060 KRTAP13-1Q8IUC0 172 aa3.24□□□□□ -1.89
ZNF440-201ENST00000304060 FAT3Q8TDW7 4589 aa3.24□□□□□ -1.89
ZNF440-201ENST00000304060 KRTAP9-7A8MTY7 169 aa3.24□□□□□ -1.89
ZNF440-201ENST00000304060 SPRR1BP22528 89 aa3.24□□□□□ -1.89
ZNF440-201ENST00000304060 LRP2P98164 4655 aa3.23□□□□□ -1.89
ZNF440-201ENST00000304060 HRES1P13985 223 aa3.23□□□□□ -1.89
ZNF440-201ENST00000304060 TP53AIP1Q9HCN2 124 aa3.22□□□□□ -1.89
ZNF440-201ENST00000304060 LINC00483Q53H64 154 aa3.22□□□□□ -1.89
ZNF440-201ENST00000304060 IGFL1Q6UW32 110 aa3.22□□□□□ -1.89
ZNF440-201ENST00000304060 IGKV2D-30A0A075B6S6 120 aa3.22□□□□□ -1.89
ZNF440-201ENST00000304060 IGKV2-30P06310 120 aa3.22□□□□□ -1.89
ZNF440-201ENST00000304060 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.89
ZNF440-201ENST00000304060 KRTAP7-1Q8IUC3 87 aa3.2□□□□□ -1.9
ZNF440-201ENST00000304060 RPL37P61927 97 aaKnown RBP3.2□□□□□ -1.9
ZNF440-201ENST00000304060 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
ZNF440-201ENST00000304060 KRTAP3-1Q9BYR8 98 aa3.19□□□□□ -1.9
ZNF440-201ENST00000304060 A8MWP4 228 aa3.19□□□□□ -1.9
ZNF440-201ENST00000304060 LINC00472Q9H8W2 130 aa3.19□□□□□ -1.9
ZNF440-201ENST00000304060 CSAG1Q6PB30 78 aa3.18□□□□□ -1.9
ZNF440-201ENST00000304060 MMP24-AS1A0A0U1RRL7 71 aa3.18□□□□□ -1.9
ZNF440-201ENST00000304060 A0A1B0GVX0 72 aa3.18□□□□□ -1.9
ZNF440-201ENST00000304060 P0C880 135 aa3.18□□□□□ -1.9
ZNF440-201ENST00000304060 KRTAP10-6P60371 365 aaPredicted RBP3.17□□□□□ -1.9
ZNF440-201ENST00000304060 MRPL34Q9BQ48 92 aaKnown RBP3.16□□□□□ -1.9
ZNF440-201ENST00000304060 DMAC1Q96GE9 116 aa3.15□□□□□ -1.9
ZNF440-201ENST00000304060 A8MUU9 505 aa3.15□□□□□ -1.91
ZNF440-201ENST00000304060 KRTAP16-1A8MUX0 517 aa3.14□□□□□ -1.91
ZNF440-201ENST00000304060 UQCR11O14957 56 aa3.14□□□□□ -1.91
ZNF440-201ENST00000304060 MT1HP80294 61 aa3.14□□□□□ -1.91
ZNF440-201ENST00000304060 C8orf17Q9NRJ1 99 aa3.14□□□□□ -1.91
ZNF440-201ENST00000304060 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
ZNF440-201ENST00000304060 MIR22HGQ0VDD5 57 aa3.12□□□□□ -1.91
ZNF440-201ENST00000304060 FAT4Q6V0I7 4981 aa3.11□□□□□ -1.91
ZNF440-201ENST00000304060 KRTAP10-10P60014 251 aa3.11□□□□□ -1.91
ZNF440-201ENST00000304060 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
ZNF440-201ENST00000304060 TNXBP22105 4242 aa3.1□□□□□ -1.91
ZNF440-201ENST00000304060 ACYP2P14621 99 aa3.1□□□□□ -1.91
ZNF440-201ENST00000304060 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
ZNF440-201ENST00000304060 C20orf166-AS1Q96NR2 134 aa3.09□□□□□ -1.92
ZNF440-201ENST00000304060 A0A1B0GU69 56 aa3.06□□□□□ -1.92
ZNF440-201ENST00000304060 KRTAP4-1Q9BYQ7 146 aa3.05□□□□□ -1.92
ZNF440-201ENST00000304060 Q5W150 140 aa3.05□□□□□ -1.92
ZNF440-201ENST00000304060 K7ERS5 55 aa3.02□□□□□ -1.93
ZNF440-201ENST00000304060 CRIPTQ9P021 101 aa3.01□□□□□ -1.93
ZNF440-201ENST00000304060 S4R3F8 94 aa2.99□□□□□ -1.93
ZNF440-201ENST00000304060 H0YAA0 97 aa2.97□□□□□ -1.93
ZNF440-201ENST00000304060 H1FX-AS1Q4G0G2 97 aa2.97□□□□□ -1.93
ZNF440-201ENST00000304060 KRTAP19-1Q8IUB9 90 aa2.96□□□□□ -1.94
ZNF440-201ENST00000304060 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.94
ZNF440-201ENST00000304060 MUC17Q685J3 4493 aa2.95□□□□□ -1.94
ZNF440-201ENST00000304060 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
ZNF440-201ENST00000304060 PLAC4Q8WY50 150 aa2.93□□□□□ -1.94
ZNF440-201ENST00000304060 FSIP2Q5CZC0 6907 aa2.92□□□□□ -1.94
ZNF440-201ENST00000304060 KRTAP19-2Q3LHN2 52 aa2.91□□□□□ -1.94
ZNF440-201ENST00000304060 LPAP08519 4548 aa2.91□□□□□ -1.94
ZNF440-201ENST00000304060 R4GN34 69 aa2.91□□□□□ -1.94
ZNF440-201ENST00000304060 SPINT4Q6UDR6 99 aa2.9□□□□□ -1.94
ZNF440-201ENST00000304060 MT2AP02795 61 aa2.9□□□□□ -1.95
ZNF440-201ENST00000304060 CAMK2N1Q7Z7J9 78 aa2.88□□□□□ -1.95
ZNF440-201ENST00000304060 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
ZNF440-201ENST00000304060 MUC2Q02817 5179 aa2.87□□□□□ -1.95
ZNF440-201ENST00000304060 KRTAP19-6Q3LI70 58 aa2.86□□□□□ -1.95
ZNF440-201ENST00000304060 KRTAP9-8Q9BYQ0 159 aa2.85□□□□□ -1.95
ZNF440-201ENST00000304060 A0A0D9SG42 100 aa2.84□□□□□ -1.95
ZNF440-201ENST00000304060 MT1FP04733 61 aa2.82□□□□□ -1.96
ZNF440-201ENST00000304060 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
ZNF440-201ENST00000304060 A0A1B0GU33 70 aa2.82□□□□□ -1.96
ZNF440-201ENST00000304060 M0QZ58 72 aa2.81□□□□□ -1.96
ZNF440-201ENST00000304060 KRTAP9-3Q9BYQ3 159 aa2.8□□□□□ -1.96
ZNF440-201ENST00000304060 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
ZNF440-201ENST00000304060 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
ZNF440-201ENST00000304060 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
ZNF440-201ENST00000304060 USH2AO75445 5202 aa2.74□□□□□ -1.97
ZNF440-201ENST00000304060 SSPOA2VEC9 5147 aa2.74□□□□□ -1.97
ZNF440-201ENST00000304060 SYNE2Q8WXH0 6885 aaKnown RBP2.7□□□□□ -1.98
ZNF440-201ENST00000304060 SPRR2EP22531 72 aa2.68□□□□□ -1.98
ZNF440-201ENST00000304060 SPRR2BP35325 72 aa2.68□□□□□ -1.98
ZNF440-201ENST00000304060 SPRR2AP35326 72 aa2.68□□□□□ -1.98
ZNF440-201ENST00000304060 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
ZNF440-201ENST00000304060 NEBP20929 6669 aa2.68□□□□□ -1.98
ZNF440-201ENST00000304060 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
ZNF440-201ENST00000304060 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
ZNF440-201ENST00000304060 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
ZNF440-201ENST00000304060 KRTAP2-1Q9BYU5 128 aa2.67□□□□□ -1.98
ZNF440-201ENST00000304060 FLGP20930 4061 aaPredicted RBP2.67□□□□□ -1.98
ZNF440-201ENST00000304060 SPRR2FQ96RM1 72 aa2.65□□□□□ -1.99
ZNF440-201ENST00000304060 KRTAP13-4Q3LI77 160 aa2.64□□□□□ -1.99
ZNF440-201ENST00000304060 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
ZNF440-201ENST00000304060 KRTAP9-4Q9BYQ2 154 aa2.63□□□□□ -1.99
ZNF440-201ENST00000304060 KRTAP10-5P60370 271 aa2.63□□□□□ -1.99
ZNF440-201ENST00000304060 SPRR2DP22532 72 aa2.62□□□□□ -1.99
ZNF440-201ENST00000304060 LCE5AQ5TCM9 118 aa2.6□□□□□ -1.99
ZNF440-201ENST00000304060 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
ZNF440-201ENST00000304060 KRTAP12-1P59990 96 aa2.59□□□□□ -1.99
ZNF440-201ENST00000304060 INE1O15225 51 aa2.59□□□□□ -1.99
ZNF440-201ENST00000304060 MACF1Q9UPN3 7388 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms