RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 PKHD1P08F94 4074 aa6.4□□□□□ -1.38
APLF-201ENST00000303795 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
APLF-201ENST00000303795 FAT1Q14517 4588 aa6.38□□□□□ -1.39
APLF-201ENST00000303795 S4R3F8 94 aa6.33□□□□□ -1.4
APLF-201ENST00000303795 MYCBP2O75592 4640 aa6.31□□□□□ -1.4
APLF-201ENST00000303795 KRTAP3-1Q9BYR8 98 aa6.3□□□□□ -1.4
APLF-201ENST00000303795 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
APLF-201ENST00000303795 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
APLF-201ENST00000303795 TPRXLQ17RH7 258 aa6.2□□□□□ -1.42
APLF-201ENST00000303795 R4GN34 69 aa6.2□□□□□ -1.42
APLF-201ENST00000303795 A0A0A0MQY5 61 aa6.2□□□□□ -1.42
APLF-201ENST00000303795 M0QZ58 72 aa6.19□□□□□ -1.42
APLF-201ENST00000303795 TNXBP22105 4242 aa6.19□□□□□ -1.42
APLF-201ENST00000303795 M0R2T5 61 aa6.17□□□□□ -1.42
APLF-201ENST00000303795 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
APLF-201ENST00000303795 XP32Q5T750 250 aa6.16□□□□□ -1.42
APLF-201ENST00000303795 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
APLF-201ENST00000303795 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.42
APLF-201ENST00000303795 LUZP6Q538Z0 58 aa6.13□□□□□ -1.43
APLF-201ENST00000303795 KIAA1109Q2LD37 5005 aa6.1□□□□□ -1.43
APLF-201ENST00000303795 DYNC1H1Q14204 4646 aaKnown RBP6.1□□□□□ -1.43
APLF-201ENST00000303795 KRTAP10-8P60410 259 aa6.1□□□□□ -1.43
APLF-201ENST00000303795 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
APLF-201ENST00000303795 KRTAP13-4Q3LI77 160 aa6.09□□□□□ -1.43
APLF-201ENST00000303795 KRTAP10-6P60371 365 aaPredicted RBP6.07□□□□□ -1.44
APLF-201ENST00000303795 RPS29P62273 56 aaKnown RBP6.07□□□□□ -1.44
APLF-201ENST00000303795 HSPG2P98160 4391 aa6.06□□□□□ -1.44
APLF-201ENST00000303795 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
APLF-201ENST00000303795 BIRC6Q9NR09 4857 aa6.04□□□□□ -1.44
APLF-201ENST00000303795 RYR1P21817 5038 aa6.04□□□□□ -1.44
APLF-201ENST00000303795 KRTAP3-2Q9BYR7 98 aa6.03□□□□□ -1.44
APLF-201ENST00000303795 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
APLF-201ENST00000303795 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
APLF-201ENST00000303795 PCLOQ9Y6V0 5065 aa6□□□□□ -1.45
APLF-201ENST00000303795 KRTAP12-2P59991 146 aa5.99□□□□□ -1.45
APLF-201ENST00000303795 KRTAP17-1Q9BYP8 105 aa5.97□□□□□ -1.45
APLF-201ENST00000303795 KRTAP4-5Q9BYR2 181 aa5.97□□□□□ -1.45
APLF-201ENST00000303795 ABCA13Q86UQ4 5058 aa5.95□□□□□ -1.46
APLF-201ENST00000303795 HERC2O95714 4834 aa5.93□□□□□ -1.46
APLF-201ENST00000303795 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
APLF-201ENST00000303795 KRTAP10-4P60372 401 aaPredicted RBP5.87□□□□□ -1.47
APLF-201ENST00000303795 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
APLF-201ENST00000303795 LPAP08519 4548 aa5.84□□□□□ -1.47
APLF-201ENST00000303795 MT1HL1P0DM35 61 aa5.79□□□□□ -1.48
APLF-201ENST00000303795 LRP2P98164 4655 aa5.78□□□□□ -1.48
APLF-201ENST00000303795 HERC1Q15751 4861 aa5.77□□□□□ -1.49
APLF-201ENST00000303795 LORP23490 312 aaPredicted RBP5.59□□□□□ -1.51
APLF-201ENST00000303795 KRTAP10-10P60014 251 aa5.56□□□□□ -1.52
APLF-201ENST00000303795 MUC2Q02817 5179 aa5.5□□□□□ -1.53
APLF-201ENST00000303795 TNP1P09430 55 aa5.49□□□□□ -1.53
APLF-201ENST00000303795 KRTAP4-1Q9BYQ7 146 aa5.48□□□□□ -1.53
APLF-201ENST00000303795 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.53
APLF-201ENST00000303795 UBR4Q5T4S7 5183 aa5.45□□□□□ -1.54
APLF-201ENST00000303795 MUC17Q685J3 4493 aa5.45□□□□□ -1.54
APLF-201ENST00000303795 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
APLF-201ENST00000303795 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
APLF-201ENST00000303795 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
APLF-201ENST00000303795 FLGP20930 4061 aaPredicted RBP5.36□□□□□ -1.55
APLF-201ENST00000303795 FAT4Q6V0I7 4981 aa5.29□□□□□ -1.56
APLF-201ENST00000303795 FSIP2Q5CZC0 6907 aa5.28□□□□□ -1.56
APLF-201ENST00000303795 KRTAP19-2Q3LHN2 52 aa5.13□□□□□ -1.59
APLF-201ENST00000303795 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
APLF-201ENST00000303795 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
APLF-201ENST00000303795 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
APLF-201ENST00000303795 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
APLF-201ENST00000303795 MT1HP80294 61 aa4.92□□□□□ -1.62
APLF-201ENST00000303795 MT1FP04733 61 aa4.9□□□□□ -1.62
APLF-201ENST00000303795 INE1O15225 51 aa4.88□□□□□ -1.63
APLF-201ENST00000303795 MT2AP02795 61 aa4.87□□□□□ -1.63
APLF-201ENST00000303795 KRTAP10-12P60413 245 aa4.84□□□□□ -1.64
APLF-201ENST00000303795 CRCT1Q9UGL9 99 aa4.83□□□□□ -1.64
APLF-201ENST00000303795 USH2AO75445 5202 aa4.82□□□□□ -1.64
APLF-201ENST00000303795 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
APLF-201ENST00000303795 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
APLF-201ENST00000303795 LCE2CQ5TA81 110 aa4.72□□□□□ -1.65
APLF-201ENST00000303795 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
APLF-201ENST00000303795 SPRR2GQ9BYE4 73 aa4.68□□□□□ -1.66
APLF-201ENST00000303795 KMT2DO14686 5537 aa4.66□□□□□ -1.66
APLF-201ENST00000303795 DSTQ03001 7570 aaKnown RBP4.65□□□□□ -1.67
APLF-201ENST00000303795 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
APLF-201ENST00000303795 LCE2AQ5TA79 106 aaPredicted RBP4.62□□□□□ -1.67
APLF-201ENST00000303795 KRTAP9-8Q9BYQ0 159 aa4.6□□□□□ -1.67
APLF-201ENST00000303795 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
APLF-201ENST00000303795 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.68
APLF-201ENST00000303795 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.68
APLF-201ENST00000303795 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.68
APLF-201ENST00000303795 MT1BP07438 61 aa4.53□□□□□ -1.68
APLF-201ENST00000303795 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
APLF-201ENST00000303795 MT1XP80297 61 aa4.52□□□□□ -1.69
APLF-201ENST00000303795 KRTAP10-5P60370 271 aa4.49□□□□□ -1.69
APLF-201ENST00000303795 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
APLF-201ENST00000303795 LCE2BO14633 110 aa4.39□□□□□ -1.71
APLF-201ENST00000303795 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
APLF-201ENST00000303795 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
APLF-201ENST00000303795 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
APLF-201ENST00000303795 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
APLF-201ENST00000303795 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
APLF-201ENST00000303795 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
APLF-201ENST00000303795 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
APLF-201ENST00000303795 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms