RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 SPANXA2-OT1Q8N9U9 137 aa9.48□□□□□ -0.89
SCAMP3-201ENST00000302631 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.9
SCAMP3-201ENST00000302631 MT1FP04733 61 aa9.45□□□□□ -0.9
SCAMP3-201ENST00000302631 NDUFC1O43677 76 aa9.41□□□□□ -0.9
SCAMP3-201ENST00000302631 ACYP2P14621 99 aa9.4□□□□□ -0.9
SCAMP3-201ENST00000302631 CYSTM1Q9H1C7 97 aa9.39□□□□□ -0.91
SCAMP3-201ENST00000302631 H7BZZ5 65 aa9.37□□□□□ -0.91
SCAMP3-201ENST00000302631 KRTAP10-10P60014 251 aa9.37□□□□□ -0.91
SCAMP3-201ENST00000302631 KRTAP9-2Q9BYQ4 174 aa9.36□□□□□ -0.91
SCAMP3-201ENST00000302631 CCDC179H3BU77 68 aa9.33□□□□□ -0.92
SCAMP3-201ENST00000302631 KRTAP9-3Q9BYQ3 159 aa9.32□□□□□ -0.92
SCAMP3-201ENST00000302631 H0YAA0 97 aa9.28□□□□□ -0.92
SCAMP3-201ENST00000302631 CHKB-CPT1BH3BT56 60 aa9.17□□□□□ -0.94
SCAMP3-201ENST00000302631 SPTSSBQ8NFR3 76 aa9.16□□□□□ -0.94
SCAMP3-201ENST00000302631 LCE2BO14633 110 aa9.14□□□□□ -0.95
SCAMP3-201ENST00000302631 COA5Q86WW8 74 aa9.14□□□□□ -0.95
SCAMP3-201ENST00000302631 ADM2Q7Z4H4 148 aa9.11□□□□□ -0.95
SCAMP3-201ENST00000302631 KRTAP19-1Q8IUB9 90 aa9.09□□□□□ -0.95
SCAMP3-201ENST00000302631 CRIPTQ9P021 101 aa9.07□□□□□ -0.96
SCAMP3-201ENST00000302631 ATP5EP56381 51 aaPredicted RBP9.06□□□□□ -0.96
SCAMP3-201ENST00000302631 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
SCAMP3-201ENST00000302631 USH2AO75445 5202 aa9.06□□□□□ -0.96
SCAMP3-201ENST00000302631 SPRR2GQ9BYE4 73 aa9.05□□□□□ -0.96
SCAMP3-201ENST00000302631 TMEM258P61165 79 aa9.02□□□□□ -0.97
SCAMP3-201ENST00000302631 P0C880 135 aa9□□□□□ -0.97
SCAMP3-201ENST00000302631 CRCT1Q9UGL9 99 aa8.94□□□□□ -0.98
SCAMP3-201ENST00000302631 KRTAP19-8Q3LI54 63 aa8.93□□□□□ -0.98
SCAMP3-201ENST00000302631 SSPOA2VEC9 5147 aa8.89□□□□□ -0.99
SCAMP3-201ENST00000302631 FSIP2Q5CZC0 6907 aa8.87□□□□□ -0.99
SCAMP3-201ENST00000302631 KRTAP9-6A0A140TA67 174 aa8.87□□□□□ -0.99
SCAMP3-201ENST00000302631 MT1BP07438 61 aa8.84□□□□□ -0.99
SCAMP3-201ENST00000302631 PCP4P48539 62 aa8.84□□□□□ -0.99
SCAMP3-201ENST00000302631 R4GN34 69 aa8.83□□□□□ -1
SCAMP3-201ENST00000302631 Q5VV11 94 aa8.8□□□□□ -1
SCAMP3-201ENST00000302631 M0QZ58 72 aa8.78□□□□□ -1
SCAMP3-201ENST00000302631 KRTAP19-6Q3LI70 58 aa8.76□□□□□ -1.01
SCAMP3-201ENST00000302631 SEC61GP60059 68 aa8.73□□□□□ -1.01
SCAMP3-201ENST00000302631 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
SCAMP3-201ENST00000302631 KRTAP13-4Q3LI77 160 aa8.64□□□□□ -1.03
SCAMP3-201ENST00000302631 A0A1B0GU69 56 aa8.63□□□□□ -1.03
SCAMP3-201ENST00000302631 LINC01558Q9Y6Z2 57 aa8.63□□□□□ -1.03
SCAMP3-201ENST00000302631 FCGBPQ9Y6R7 5405 aaPredicted RBP8.59□□□□□ -1.03
SCAMP3-201ENST00000302631 A0A1B0GU33 70 aa8.58□□□□□ -1.04
SCAMP3-201ENST00000302631 LINC01554Q52M75 96 aa8.57□□□□□ -1.04
SCAMP3-201ENST00000302631 A6NN06 94 aa8.54□□□□□ -1.04
SCAMP3-201ENST00000302631 PLAC4Q8WY50 150 aa8.54□□□□□ -1.04
SCAMP3-201ENST00000302631 KRTAP10-5P60370 271 aa8.52□□□□□ -1.05
SCAMP3-201ENST00000302631 PRR15LQ9BU68 103 aa8.52□□□□□ -1.05
SCAMP3-201ENST00000302631 RPS28P62857 69 aaKnown RBP8.48□□□□□ -1.05
SCAMP3-201ENST00000302631 SPATA8Q6RVD6 105 aa8.46□□□□□ -1.05
SCAMP3-201ENST00000302631 Q1T7F1 81 aa8.42□□□□□ -1.06
SCAMP3-201ENST00000302631 V9GYY9 64 aa8.42□□□□□ -1.06
SCAMP3-201ENST00000302631 SMIM26A0A096LP01 95 aa8.41□□□□□ -1.06
SCAMP3-201ENST00000302631 MT1XP80297 61 aa8.4□□□□□ -1.06
SCAMP3-201ENST00000302631 A0A0D9SG42 100 aa8.34□□□□□ -1.07
SCAMP3-201ENST00000302631 PRO2289Q9P1D8 64 aa8.34□□□□□ -1.07
SCAMP3-201ENST00000302631 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.3□□□□□ -1.08
SCAMP3-201ENST00000302631 UQCR11O14957 56 aa8.29□□□□□ -1.08
SCAMP3-201ENST00000302631 KRTAP12-1P59990 96 aa8.28□□□□□ -1.08
SCAMP3-201ENST00000302631 A8MU10 97 aa8.26□□□□□ -1.09
SCAMP3-201ENST00000302631 PSPHP1O15172 72 aa8.24□□□□□ -1.09
SCAMP3-201ENST00000302631 KRTAP12-2P59991 146 aa8.2□□□□□ -1.1
SCAMP3-201ENST00000302631 SPINT4Q6UDR6 99 aa8.2□□□□□ -1.1
SCAMP3-201ENST00000302631 CAMK2N1Q7Z7J9 78 aa8.16□□□□□ -1.1
SCAMP3-201ENST00000302631 MIR22HGQ0VDD5 57 aa8.12□□□□□ -1.11
SCAMP3-201ENST00000302631 MACF1Q9UPN3 7388 aaKnown RBP8.09□□□□□ -1.11
SCAMP3-201ENST00000302631 KRTAP9-7A8MTY7 169 aa8.03□□□□□ -1.12
SCAMP3-201ENST00000302631 KRTAP10-7P60409 375 aaPredicted RBP8.01□□□□□ -1.13
SCAMP3-201ENST00000302631 KRTAP10-12P60413 245 aa8.01□□□□□ -1.13
SCAMP3-201ENST00000302631 A6NED7 52 aa7.99□□□□□ -1.13
SCAMP3-201ENST00000302631 KRTAP6-3Q3LI67 103 aa7.96□□□□□ -1.13
SCAMP3-201ENST00000302631 KMT2DO14686 5537 aa7.91□□□□□ -1.14
SCAMP3-201ENST00000302631 SYNE2Q8WXH0 6885 aaKnown RBP7.91□□□□□ -1.14
SCAMP3-201ENST00000302631 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
SCAMP3-201ENST00000302631 KRTAP4-8A0A0G2JLE6 195 aa7.86□□□□□ -1.15
SCAMP3-201ENST00000302631 KRTAP4-8Q9BYQ9 185 aa7.86□□□□□ -1.15
SCAMP3-201ENST00000302631 KRTAP5-9P26371 169 aa7.85□□□□□ -1.15
SCAMP3-201ENST00000302631 K7ERS5 55 aa7.83□□□□□ -1.16
SCAMP3-201ENST00000302631 CDC42SE1Q9NRR8 79 aa7.8□□□□□ -1.16
SCAMP3-201ENST00000302631 KRTAP8-1Q8IUC2 63 aa7.79□□□□□ -1.16
SCAMP3-201ENST00000302631 TNP1P09430 55 aa7.7□□□□□ -1.18
SCAMP3-201ENST00000302631 MUC12Q9UKN1 5478 aa7.65□□□□□ -1.18
SCAMP3-201ENST00000302631 SPRR2FQ96RM1 72 aa7.64□□□□□ -1.19
SCAMP3-201ENST00000302631 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
SCAMP3-201ENST00000302631 KRTAP19-7Q3SYF9 63 aa7.52□□□□□ -1.2
SCAMP3-201ENST00000302631 LCE3AQ5TA76 89 aa7.51□□□□□ -1.21
SCAMP3-201ENST00000302631 MDN1Q9NU22 5596 aa7.48□□□□□ -1.21
SCAMP3-201ENST00000302631 ROMO1P60602 79 aa7.45□□□□□ -1.22
SCAMP3-201ENST00000302631 LCE1AQ5T7P2 110 aa7.44□□□□□ -1.22
SCAMP3-201ENST00000302631 KRTAP19-5Q3LI72 72 aa7.43□□□□□ -1.22
SCAMP3-201ENST00000302631 BRK1Q8WUW1 75 aa7.43□□□□□ -1.22
SCAMP3-201ENST00000302631 NEBP20929 6669 aa7.41□□□□□ -1.22
SCAMP3-201ENST00000302631 MT1EP04732 61 aa7.41□□□□□ -1.22
SCAMP3-201ENST00000302631 SPRR2EP22531 72 aa7.41□□□□□ -1.22
SCAMP3-201ENST00000302631 SPRR2BP35325 72 aa7.41□□□□□ -1.22
SCAMP3-201ENST00000302631 SPRR2AP35326 72 aa7.41□□□□□ -1.22
SCAMP3-201ENST00000302631 KRTAP23-1A1A580 65 aa7.36□□□□□ -1.23
SCAMP3-201ENST00000302631 KRTAP19-3Q7Z4W3 81 aa7.24□□□□□ -1.25
SCAMP3-201ENST00000302631 KRTAP12-3P60328 96 aa7.23□□□□□ -1.25
SCAMP3-201ENST00000302631 LCE5AQ5TCM9 118 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms