RNA–Protein interactions for RNA: ENST00000302424.11

TRIM8-201, Transcript of tripartite motif containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM8, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-201ENST00000302424 FAT3Q8TDW7 4589 aa9.57□□□□□ -0.88
TRIM8-201ENST00000302424 TNXBP22105 4242 aa9.55□□□□□ -0.88
TRIM8-201ENST00000302424 KRTAP21-3Q3LHN1 58 aa9.51□□□□□ -0.89
TRIM8-201ENST00000302424 H0YAA0 97 aa9.5□□□□□ -0.89
TRIM8-201ENST00000302424 RYR3Q15413 4870 aa9.5□□□□□ -0.89
TRIM8-201ENST00000302424 LPAP08519 4548 aa9.44□□□□□ -0.9
TRIM8-201ENST00000302424 KRTAP17-1Q9BYP8 105 aa9.42□□□□□ -0.9
TRIM8-201ENST00000302424 A0A1B0GU33 70 aa9.42□□□□□ -0.9
TRIM8-201ENST00000302424 KIAA1109Q2LD37 5005 aa9.42□□□□□ -0.9
TRIM8-201ENST00000302424 CSAG1Q6PB30 78 aa9.4□□□□□ -0.9
TRIM8-201ENST00000302424 Q5VSD8 79 aa9.39□□□□□ -0.91
TRIM8-201ENST00000302424 COX6B2Q6YFQ2 88 aa9.38□□□□□ -0.91
TRIM8-201ENST00000302424 KRTAP10-8P60410 259 aa9.35□□□□□ -0.91
TRIM8-201ENST00000302424 H1FX-AS1Q4G0G2 97 aa9.35□□□□□ -0.91
TRIM8-201ENST00000302424 CRIPTQ9P021 101 aa9.3□□□□□ -0.92
TRIM8-201ENST00000302424 RYR1P21817 5038 aa9.3□□□□□ -0.92
TRIM8-201ENST00000302424 LRP2P98164 4655 aa9.28□□□□□ -0.92
TRIM8-201ENST00000302424 XP32Q5T750 250 aa9.26□□□□□ -0.93
TRIM8-201ENST00000302424 A0A0D9SG42 100 aa9.23□□□□□ -0.93
TRIM8-201ENST00000302424 LINC01554Q52M75 96 aa9.22□□□□□ -0.93
TRIM8-201ENST00000302424 RPL37P61927 97 aaKnown RBP9.21□□□□□ -0.94
TRIM8-201ENST00000302424 EPPK1P58107 5090 aaKnown RBP9.19□□□□□ -0.94
TRIM8-201ENST00000302424 KRTAP13-4Q3LI77 160 aa9.18□□□□□ -0.94
TRIM8-201ENST00000302424 ABCA13Q86UQ4 5058 aa9.17□□□□□ -0.94
TRIM8-201ENST00000302424 KRTAP10-6P60371 365 aaPredicted RBP9.14□□□□□ -0.95
TRIM8-201ENST00000302424 S4R3F8 94 aa9.1□□□□□ -0.95
TRIM8-201ENST00000302424 P0C880 135 aa9.1□□□□□ -0.95
TRIM8-201ENST00000302424 MT1HL1P0DM35 61 aa9.09□□□□□ -0.95
TRIM8-201ENST00000302424 K7ERS5 55 aa9.01□□□□□ -0.97
TRIM8-201ENST00000302424 KRTAP25-1Q3LHN0 102 aa8.99□□□□□ -0.97
TRIM8-201ENST00000302424 KRTAP4-5Q9BYR2 181 aa8.94□□□□□ -0.98
TRIM8-201ENST00000302424 ROMO1P60602 79 aa8.86□□□□□ -0.99
TRIM8-201ENST00000302424 C10orf95Q9H7T3 257 aa8.86□□□□□ -0.99
TRIM8-201ENST00000302424 KRTAP12-2P59991 146 aa8.85□□□□□ -0.99
TRIM8-201ENST00000302424 SPINT4Q6UDR6 99 aa8.85□□□□□ -0.99
TRIM8-201ENST00000302424 MUC2Q02817 5179 aa8.8□□□□□ -1
TRIM8-201ENST00000302424 TPRXLQ17RH7 258 aa8.76□□□□□ -1.01
TRIM8-201ENST00000302424 KRTAP12-1P59990 96 aa8.7□□□□□ -1.02
TRIM8-201ENST00000302424 MUC17Q685J3 4493 aa8.65□□□□□ -1.03
TRIM8-201ENST00000302424 HERC2O95714 4834 aa8.62□□□□□ -1.03
TRIM8-201ENST00000302424 KRTAP4-1Q9BYQ7 146 aa8.61□□□□□ -1.03
TRIM8-201ENST00000302424 M0QZ58 72 aa8.6□□□□□ -1.03
TRIM8-201ENST00000302424 R4GN34 69 aa8.52□□□□□ -1.05
TRIM8-201ENST00000302424 SEC61BP60468 96 aaKnown RBP8.44□□□□□ -1.06
TRIM8-201ENST00000302424 HERC1Q15751 4861 aa8.4□□□□□ -1.06
TRIM8-201ENST00000302424 FAT4Q6V0I7 4981 aa8.31□□□□□ -1.08
TRIM8-201ENST00000302424 PCLOQ9Y6V0 5065 aa8.3□□□□□ -1.08
TRIM8-201ENST00000302424 KRTAP19-2Q3LHN2 52 aa8.27□□□□□ -1.09
TRIM8-201ENST00000302424 KRTAP15-1Q3LI76 137 aa8.2□□□□□ -1.1
TRIM8-201ENST00000302424 NDUFAF8A1L188 74 aa8.17□□□□□ -1.1
TRIM8-201ENST00000302424 FLGP20930 4061 aaPredicted RBP8.15□□□□□ -1.1
TRIM8-201ENST00000302424 RNF213Q63HN8 5207 aa8.15□□□□□ -1.1
TRIM8-201ENST00000302424 BIRC6Q9NR09 4857 aa8.13□□□□□ -1.11
TRIM8-201ENST00000302424 CAMK2N1Q7Z7J9 78 aa8.12□□□□□ -1.11
TRIM8-201ENST00000302424 KRTAP23-1A1A580 65 aa8.12□□□□□ -1.11
TRIM8-201ENST00000302424 HMCN2Q8NDA2 5059 aa8.05□□□□□ -1.12
TRIM8-201ENST00000302424 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
TRIM8-201ENST00000302424 A0A0A0MQY5 61 aa7.93□□□□□ -1.14
TRIM8-201ENST00000302424 PLAC4Q8WY50 150 aa7.9□□□□□ -1.14
TRIM8-201ENST00000302424 M0R2T5 61 aa7.82□□□□□ -1.16
TRIM8-201ENST00000302424 LOC100996750A0A140TA64 210 aa7.73□□□□□ -1.17
TRIM8-201ENST00000302424 KRTAP4-6Q9BYQ5 205 aa7.73□□□□□ -1.17
TRIM8-201ENST00000302424 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
TRIM8-201ENST00000302424 TNP1P09430 55 aa7.69□□□□□ -1.18
TRIM8-201ENST00000302424 LCE4AQ5TA78 99 aa7.68□□□□□ -1.18
TRIM8-201ENST00000302424 PP632Q6XCG6 107 aa7.65□□□□□ -1.19
TRIM8-201ENST00000302424 MT1HP80294 61 aa7.62□□□□□ -1.19
TRIM8-201ENST00000302424 KRTAP10-10P60014 251 aa7.59□□□□□ -1.19
TRIM8-201ENST00000302424 KRTAP9-6A0A140TA67 174 aa7.56□□□□□ -1.2
TRIM8-201ENST00000302424 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
TRIM8-201ENST00000302424 MT1FP04733 61 aa7.56□□□□□ -1.2
TRIM8-201ENST00000302424 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
TRIM8-201ENST00000302424 KRTAP19-4Q3LI73 84 aa7.54□□□□□ -1.2
TRIM8-201ENST00000302424 MT2AP02795 61 aa7.51□□□□□ -1.21
TRIM8-201ENST00000302424 LUZP6Q538Z0 58 aa7.49□□□□□ -1.21
TRIM8-201ENST00000302424 KRTAP4-12Q9BQ66 201 aa7.48□□□□□ -1.21
TRIM8-201ENST00000302424 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
TRIM8-201ENST00000302424 KRTAP9-8Q9BYQ0 159 aa7.43□□□□□ -1.22
TRIM8-201ENST00000302424 LCE3AQ5TA76 89 aa7.42□□□□□ -1.22
TRIM8-201ENST00000302424 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
TRIM8-201ENST00000302424 KRTAP9-2Q9BYQ4 174 aa7.4□□□□□ -1.22
TRIM8-201ENST00000302424 KRTAP9-9Q9BYP9 154 aa7.35□□□□□ -1.23
TRIM8-201ENST00000302424 KRTAP9-4Q9BYQ2 154 aa7.35□□□□□ -1.23
TRIM8-201ENST00000302424 USH2AO75445 5202 aa7.33□□□□□ -1.24
TRIM8-201ENST00000302424 MT1BP07438 61 aa7.24□□□□□ -1.25
TRIM8-201ENST00000302424 KRTAP10-5P60370 271 aa7.21□□□□□ -1.25
TRIM8-201ENST00000302424 KMT2DO14686 5537 aa7.21□□□□□ -1.26
TRIM8-201ENST00000302424 MT1XP80297 61 aa7.2□□□□□ -1.26
TRIM8-201ENST00000302424 SPRR5A0A1B0GTR4 108 aa7.17□□□□□ -1.26
TRIM8-201ENST00000302424 KRTAP19-8Q3LI54 63 aa7.17□□□□□ -1.26
TRIM8-201ENST00000302424 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
TRIM8-201ENST00000302424 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
TRIM8-201ENST00000302424 KRTAP9-3Q9BYQ3 159 aa7.09□□□□□ -1.27
TRIM8-201ENST00000302424 KRTAP10-12P60413 245 aa7.04□□□□□ -1.28
TRIM8-201ENST00000302424 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.29
TRIM8-201ENST00000302424 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
TRIM8-201ENST00000302424 FSIP2Q5CZC0 6907 aa6.83□□□□□ -1.32
TRIM8-201ENST00000302424 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
TRIM8-201ENST00000302424 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
TRIM8-201ENST00000302424 KRTAP19-5Q3LI72 72 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms