RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 BIRC6Q9NR09 4857 aa11.94□□□□□ -0.5
NHLH1-201ENST00000302101 UQCR11O14957 56 aa11.93□□□□□ -0.5
NHLH1-201ENST00000302101 SPATA8Q6RVD6 105 aa11.93□□□□□ -0.5
NHLH1-201ENST00000302101 A8MUU9 505 aa11.92□□□□□ -0.5
NHLH1-201ENST00000302101 MIR22HGQ0VDD5 57 aa11.91□□□□□ -0.5
NHLH1-201ENST00000302101 ABCA13Q86UQ4 5058 aa11.88□□□□□ -0.51
NHLH1-201ENST00000302101 CSAG1Q6PB30 78 aa11.84□□□□□ -0.51
NHLH1-201ENST00000302101 HERC2O95714 4834 aa11.83□□□□□ -0.52
NHLH1-201ENST00000302101 J3QL48 77 aa11.76□□□□□ -0.53
NHLH1-201ENST00000302101 XP32Q5T750 250 aa11.75□□□□□ -0.53
NHLH1-201ENST00000302101 RPL37P61927 97 aaKnown RBP11.68□□□□□ -0.54
NHLH1-201ENST00000302101 TPRXLQ17RH7 258 aa11.65□□□□□ -0.55
NHLH1-201ENST00000302101 KRTAP3-1Q9BYR8 98 aa11.62□□□□□ -0.55
NHLH1-201ENST00000302101 LPAP08519 4548 aa11.55□□□□□ -0.56
NHLH1-201ENST00000302101 ROMO1P60602 79 aa11.53□□□□□ -0.56
NHLH1-201ENST00000302101 H0YAA0 97 aa11.53□□□□□ -0.56
NHLH1-201ENST00000302101 LRP2P98164 4655 aa11.49□□□□□ -0.57
NHLH1-201ENST00000302101 PCLOQ9Y6V0 5065 aa11.47□□□□□ -0.57
NHLH1-201ENST00000302101 A0A1B0GU33 70 aa11.45□□□□□ -0.58
NHLH1-201ENST00000302101 COX6B2Q6YFQ2 88 aa11.4□□□□□ -0.58
NHLH1-201ENST00000302101 H1FX-AS1Q4G0G2 97 aa11.4□□□□□ -0.58
NHLH1-201ENST00000302101 A0A0A0MQY5 61 aa11.35□□□□□ -0.59
NHLH1-201ENST00000302101 P0C880 135 aa11.31□□□□□ -0.6
NHLH1-201ENST00000302101 KRTAP25-1Q3LHN0 102 aa11.28□□□□□ -0.6
NHLH1-201ENST00000302101 SEC61BP60468 96 aaKnown RBP11.24□□□□□ -0.61
NHLH1-201ENST00000302101 HERC1Q15751 4861 aa11.24□□□□□ -0.61
NHLH1-201ENST00000302101 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
NHLH1-201ENST00000302101 K7ERS5 55 aa11.11□□□□□ -0.63
NHLH1-201ENST00000302101 KRTAP10-6P60371 365 aaPredicted RBP11.06□□□□□ -0.64
NHLH1-201ENST00000302101 KRTAP4-1Q9BYQ7 146 aa11.06□□□□□ -0.64
NHLH1-201ENST00000302101 HMCN2Q8NDA2 5059 aa11.05□□□□□ -0.64
NHLH1-201ENST00000302101 S4R3F8 94 aa11.03□□□□□ -0.64
NHLH1-201ENST00000302101 CRIPTQ9P021 101 aa11.01□□□□□ -0.65
NHLH1-201ENST00000302101 MUC17Q685J3 4493 aa11□□□□□ -0.65
NHLH1-201ENST00000302101 KRTAP13-4Q3LI77 160 aa10.99□□□□□ -0.65
NHLH1-201ENST00000302101 A0A0D9SG42 100 aa10.96□□□□□ -0.65
NHLH1-201ENST00000302101 KRTAP3-2Q9BYR7 98 aa10.96□□□□□ -0.65
NHLH1-201ENST00000302101 NDUFAF8A1L188 74 aa10.89□□□□□ -0.67
NHLH1-201ENST00000302101 MUC2Q02817 5179 aa10.86□□□□□ -0.67
NHLH1-201ENST00000302101 SPINT4Q6UDR6 99 aa10.76□□□□□ -0.69
NHLH1-201ENST00000302101 KRTAP19-2Q3LHN2 52 aa10.74□□□□□ -0.69
NHLH1-201ENST00000302101 KRTAP12-2P59991 146 aa10.65□□□□□ -0.71
NHLH1-201ENST00000302101 UBR4Q5T4S7 5183 aa10.61□□□□□ -0.71
NHLH1-201ENST00000302101 KRTAP15-1Q3LI76 137 aa10.6□□□□□ -0.71
NHLH1-201ENST00000302101 C10orf95Q9H7T3 257 aa10.56□□□□□ -0.72
NHLH1-201ENST00000302101 KRTAP12-1P59990 96 aa10.54□□□□□ -0.72
NHLH1-201ENST00000302101 RNF213Q63HN8 5207 aa10.51□□□□□ -0.73
NHLH1-201ENST00000302101 FLGP20930 4061 aaPredicted RBP10.48□□□□□ -0.73
NHLH1-201ENST00000302101 M0QZ58 72 aa10.46□□□□□ -0.73
NHLH1-201ENST00000302101 LCE2CQ5TA81 110 aa10.44□□□□□ -0.74
NHLH1-201ENST00000302101 LUZP6Q538Z0 58 aa10.39□□□□□ -0.75
NHLH1-201ENST00000302101 FAT4Q6V0I7 4981 aa10.35□□□□□ -0.75
NHLH1-201ENST00000302101 R4GN34 69 aa10.26□□□□□ -0.77
NHLH1-201ENST00000302101 MT1HP80294 61 aa10.23□□□□□ -0.77
NHLH1-201ENST00000302101 M0R2T5 61 aa10.2□□□□□ -0.78
NHLH1-201ENST00000302101 LORP23490 312 aaPredicted RBP10.17□□□□□ -0.78
NHLH1-201ENST00000302101 KRTAP9-8Q9BYQ0 159 aa9.87□□□□□ -0.83
NHLH1-201ENST00000302101 MT2AP02795 61 aa9.85□□□□□ -0.83
NHLH1-201ENST00000302101 MT1FP04733 61 aa9.82□□□□□ -0.84
NHLH1-201ENST00000302101 KRTAP10-10P60014 251 aa9.81□□□□□ -0.84
NHLH1-201ENST00000302101 CAMK2N1Q7Z7J9 78 aa9.76□□□□□ -0.85
NHLH1-201ENST00000302101 SPRR2GQ9BYE4 73 aa9.7□□□□□ -0.86
NHLH1-201ENST00000302101 LCE2AQ5TA79 106 aaPredicted RBP9.7□□□□□ -0.86
NHLH1-201ENST00000302101 KRTAP19-1Q8IUB9 90 aa9.69□□□□□ -0.86
NHLH1-201ENST00000302101 PLAC4Q8WY50 150 aa9.65□□□□□ -0.86
NHLH1-201ENST00000302101 PP632Q6XCG6 107 aa9.55□□□□□ -0.88
NHLH1-201ENST00000302101 KRTAP9-3Q9BYQ3 159 aa9.5□□□□□ -0.89
NHLH1-201ENST00000302101 KRTAP19-8Q3LI54 63 aa9.41□□□□□ -0.9
NHLH1-201ENST00000302101 TNP1P09430 55 aa9.37□□□□□ -0.91
NHLH1-201ENST00000302101 MT1BP07438 61 aa9.31□□□□□ -0.92
NHLH1-201ENST00000302101 LCE2BO14633 110 aa9.24□□□□□ -0.93
NHLH1-201ENST00000302101 KRTAP23-1A1A580 65 aa9.17□□□□□ -0.94
NHLH1-201ENST00000302101 MT1XP80297 61 aa9.05□□□□□ -0.96
NHLH1-201ENST00000302101 KRTAP10-5P60370 271 aa9.05□□□□□ -0.96
NHLH1-201ENST00000302101 USH2AO75445 5202 aa8.99□□□□□ -0.97
NHLH1-201ENST00000302101 PRO2289Q9P1D8 64 aa8.95□□□□□ -0.98
NHLH1-201ENST00000302101 SPRR5A0A1B0GTR4 108 aa8.92□□□□□ -0.98
NHLH1-201ENST00000302101 LCE3AQ5TA76 89 aa8.89□□□□□ -0.99
NHLH1-201ENST00000302101 KRTAP10-7P60409 375 aaPredicted RBP8.73□□□□□ -1.01
NHLH1-201ENST00000302101 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
NHLH1-201ENST00000302101 FSIP2Q5CZC0 6907 aa8.69□□□□□ -1.02
NHLH1-201ENST00000302101 SSPOA2VEC9 5147 aa8.65□□□□□ -1.02
NHLH1-201ENST00000302101 KRTAP10-12P60413 245 aa8.63□□□□□ -1.03
NHLH1-201ENST00000302101 KRTAP8-1Q8IUC2 63 aa8.61□□□□□ -1.03
NHLH1-201ENST00000302101 KRTAP19-6Q3LI70 58 aa8.58□□□□□ -1.04
NHLH1-201ENST00000302101 INE1O15225 51 aa8.48□□□□□ -1.05
NHLH1-201ENST00000302101 KRTAP12-3P60328 96 aa8.45□□□□□ -1.06
NHLH1-201ENST00000302101 KMT2DO14686 5537 aa8.41□□□□□ -1.06
NHLH1-201ENST00000302101 KRTAP4-8A0A0G2JLE6 195 aa8.38□□□□□ -1.07
NHLH1-201ENST00000302101 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
NHLH1-201ENST00000302101 KRTAP9-2Q9BYQ4 174 aa8.35□□□□□ -1.07
NHLH1-201ENST00000302101 FCGBPQ9Y6R7 5405 aaPredicted RBP8.26□□□□□ -1.09
NHLH1-201ENST00000302101 KRTAP19-5Q3LI72 72 aa8.23□□□□□ -1.09
NHLH1-201ENST00000302101 CRCT1Q9UGL9 99 aa8.08□□□□□ -1.12
NHLH1-201ENST00000302101 KRTAP19-7Q3SYF9 63 aa8.07□□□□□ -1.12
NHLH1-201ENST00000302101 LCE3CQ5T5A8 94 aa7.94□□□□□ -1.14
NHLH1-201ENST00000302101 MT1EP04732 61 aa7.9□□□□□ -1.14
NHLH1-201ENST00000302101 MACF1Q9UPN3 7388 aaKnown RBP7.89□□□□□ -1.15
NHLH1-201ENST00000302101 MT1LQ93083 61 aa7.77□□□□□ -1.16
NHLH1-201ENST00000302101 SPRR2FQ96RM1 72 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms