RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 KRTAP4-16G5E9R7 235 aaPredicted RBP6.25□□□□□ -1.41
VWA3A-201ENST00000299840 MMP24-AS1A0A0U1RRL7 71 aa6.24□□□□□ -1.41
VWA3A-201ENST00000299840 HERC1Q15751 4861 aa6.23□□□□□ -1.41
VWA3A-201ENST00000299840 PRLHP81277 87 aa6.23□□□□□ -1.41
VWA3A-201ENST00000299840 IGFL1Q6UW32 110 aa6.22□□□□□ -1.41
VWA3A-201ENST00000299840 Q6ZRX8 168 aa6.2□□□□□ -1.42
VWA3A-201ENST00000299840 A0A0G2JQZ4 141 aa6.2□□□□□ -1.42
VWA3A-201ENST00000299840 SSBP3-AS1Q7Z2R9 100 aa6.19□□□□□ -1.42
VWA3A-201ENST00000299840 CRIPTQ9P021 101 aa6.19□□□□□ -1.42
VWA3A-201ENST00000299840 IGLV8-61A0A075B6I0 122 aa6.15□□□□□ -1.42
VWA3A-201ENST00000299840 Q96NJ1 140 aa6.14□□□□□ -1.43
VWA3A-201ENST00000299840 KRTAP13-2Q52LG2 175 aa6.14□□□□□ -1.43
VWA3A-201ENST00000299840 ANAPC11Q9NYG5 84 aa6.14□□□□□ -1.43
VWA3A-201ENST00000299840 TYMSOSQ8TAI1 123 aa6.13□□□□□ -1.43
VWA3A-201ENST00000299840 HMCN2Q8NDA2 5059 aa6.09□□□□□ -1.44
VWA3A-201ENST00000299840 SPRR1BP22528 89 aa6.07□□□□□ -1.44
VWA3A-201ENST00000299840 MRPL34Q9BQ48 92 aaKnown RBP6.03□□□□□ -1.44
VWA3A-201ENST00000299840 A0A1B0GVX0 72 aa6.02□□□□□ -1.45
VWA3A-201ENST00000299840 H0YAA0 97 aa6.02□□□□□ -1.45
VWA3A-201ENST00000299840 RPS29P62273 56 aaKnown RBP5.99□□□□□ -1.45
VWA3A-201ENST00000299840 SPINK1P00995 79 aa5.99□□□□□ -1.45
VWA3A-201ENST00000299840 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
VWA3A-201ENST00000299840 KRTAP13-3Q3SY46 172 aa5.95□□□□□ -1.46
VWA3A-201ENST00000299840 LRP2P98164 4655 aa5.92□□□□□ -1.46
VWA3A-201ENST00000299840 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.46
VWA3A-201ENST00000299840 LPAP08519 4548 aa5.88□□□□□ -1.47
VWA3A-201ENST00000299840 A0A1B0GU33 70 aa5.85□□□□□ -1.47
VWA3A-201ENST00000299840 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
VWA3A-201ENST00000299840 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
VWA3A-201ENST00000299840 H1FX-AS1Q4G0G2 97 aa5.8□□□□□ -1.48
VWA3A-201ENST00000299840 IGKV2-30P06310 120 aa5.79□□□□□ -1.48
VWA3A-201ENST00000299840 MUC17Q685J3 4493 aa5.79□□□□□ -1.48
VWA3A-201ENST00000299840 XP32Q5T750 250 aa5.74□□□□□ -1.49
VWA3A-201ENST00000299840 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
VWA3A-201ENST00000299840 RNF213Q63HN8 5207 aa5.72□□□□□ -1.49
VWA3A-201ENST00000299840 C9orf92A6NGG3 77 aa5.67□□□□□ -1.5
VWA3A-201ENST00000299840 RPL37P61927 97 aaKnown RBP5.64□□□□□ -1.51
VWA3A-201ENST00000299840 KRTAP4-1Q9BYQ7 146 aa5.59□□□□□ -1.51
VWA3A-201ENST00000299840 COX6B2Q6YFQ2 88 aa5.58□□□□□ -1.52
VWA3A-201ENST00000299840 MUC2Q02817 5179 aa5.55□□□□□ -1.52
VWA3A-201ENST00000299840 PLAC4Q8WY50 150 aa5.53□□□□□ -1.52
VWA3A-201ENST00000299840 PRO2289Q9P1D8 64 aa5.53□□□□□ -1.52
VWA3A-201ENST00000299840 FAT4Q6V0I7 4981 aa5.5□□□□□ -1.53
VWA3A-201ENST00000299840 LCE2AQ5TA79 106 aaPredicted RBP5.49□□□□□ -1.53
VWA3A-201ENST00000299840 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.53
VWA3A-201ENST00000299840 LCE2CQ5TA81 110 aa5.44□□□□□ -1.54
VWA3A-201ENST00000299840 A0A0D9SG42 100 aa5.43□□□□□ -1.54
VWA3A-201ENST00000299840 R4GN34 69 aa5.41□□□□□ -1.54
VWA3A-201ENST00000299840 KRTAP3-2Q9BYR7 98 aa5.39□□□□□ -1.55
VWA3A-201ENST00000299840 S4R3F8 94 aa5.38□□□□□ -1.55
VWA3A-201ENST00000299840 MT1HP80294 61 aa5.35□□□□□ -1.55
VWA3A-201ENST00000299840 KRTAP13-4Q3LI77 160 aa5.34□□□□□ -1.56
VWA3A-201ENST00000299840 FLGP20930 4061 aaPredicted RBP5.32□□□□□ -1.56
VWA3A-201ENST00000299840 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
VWA3A-201ENST00000299840 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
VWA3A-201ENST00000299840 KRTAP3-1Q9BYR8 98 aa5.26□□□□□ -1.57
VWA3A-201ENST00000299840 KRTAP10-6P60371 365 aaPredicted RBP5.25□□□□□ -1.57
VWA3A-201ENST00000299840 LORP23490 312 aaPredicted RBP5.23□□□□□ -1.57
VWA3A-201ENST00000299840 M0R2T5 61 aa5.21□□□□□ -1.58
VWA3A-201ENST00000299840 INE1O15225 51 aa5.2□□□□□ -1.58
VWA3A-201ENST00000299840 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
VWA3A-201ENST00000299840 LCE2DQ5TA82 110 aaPredicted RBP5.18□□□□□ -1.58
VWA3A-201ENST00000299840 KRTAP12-1P59990 96 aa5.16□□□□□ -1.58
VWA3A-201ENST00000299840 KRTAP9-8Q9BYQ0 159 aa5.1□□□□□ -1.59
VWA3A-201ENST00000299840 MT2AP02795 61 aa5.03□□□□□ -1.6
VWA3A-201ENST00000299840 MT1FP04733 61 aa4.98□□□□□ -1.61
VWA3A-201ENST00000299840 KRTAP3-3Q9BYR6 98 aa4.96□□□□□ -1.61
VWA3A-201ENST00000299840 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
VWA3A-201ENST00000299840 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
VWA3A-201ENST00000299840 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
VWA3A-201ENST00000299840 KRTAP10-10P60014 251 aa4.94□□□□□ -1.62
VWA3A-201ENST00000299840 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
VWA3A-201ENST00000299840 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
VWA3A-201ENST00000299840 M0QZ58 72 aa4.87□□□□□ -1.63
VWA3A-201ENST00000299840 LCE2BO14633 110 aa4.86□□□□□ -1.63
VWA3A-201ENST00000299840 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
VWA3A-201ENST00000299840 USH2AO75445 5202 aa4.8□□□□□ -1.64
VWA3A-201ENST00000299840 KRTAP19-1Q8IUB9 90 aa4.74□□□□□ -1.65
VWA3A-201ENST00000299840 SSPOA2VEC9 5147 aa4.72□□□□□ -1.65
VWA3A-201ENST00000299840 SPRR2GQ9BYE4 73 aa4.72□□□□□ -1.65
VWA3A-201ENST00000299840 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
VWA3A-201ENST00000299840 KRTAP19-8Q3LI54 63 aa4.68□□□□□ -1.66
VWA3A-201ENST00000299840 MT1BP07438 61 aa4.63□□□□□ -1.67
VWA3A-201ENST00000299840 FCGBPQ9Y6R7 5405 aaPredicted RBP4.6□□□□□ -1.67
VWA3A-201ENST00000299840 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
VWA3A-201ENST00000299840 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
VWA3A-201ENST00000299840 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
VWA3A-201ENST00000299840 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
VWA3A-201ENST00000299840 TNP1P09430 55 aa4.39□□□□□ -1.71
VWA3A-201ENST00000299840 MT1XP80297 61 aa4.37□□□□□ -1.71
VWA3A-201ENST00000299840 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
VWA3A-201ENST00000299840 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
VWA3A-201ENST00000299840 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
VWA3A-201ENST00000299840 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
VWA3A-201ENST00000299840 KRTAP10-7P60409 375 aaPredicted RBP4.16□□□□□ -1.74
VWA3A-201ENST00000299840 NEBP20929 6669 aa4.13□□□□□ -1.75
VWA3A-201ENST00000299840 KRTAP8-1Q8IUC2 63 aa4.13□□□□□ -1.75
VWA3A-201ENST00000299840 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
VWA3A-201ENST00000299840 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
VWA3A-201ENST00000299840 SPRR2FQ96RM1 72 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms