RNA–Protein interactions for RNA: ENST00000296953.6

CREBRF-201, Transcript of CREB3 regulatory factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CREBRF, Length 7,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-201ENST00000296953 LRP1BQ9NZR2 4599 aa1.71□□□□□ -2.14
CREBRF-201ENST00000296953 DNAH10Q8IVF4 4471 aa1.71□□□□□ -2.14
CREBRF-201ENST00000296953 TRRAPQ9Y4A5 3859 aa1.7□□□□□ -2.14
CREBRF-201ENST00000296953 CELSR3Q9NYQ7 3312 aa1.7□□□□□ -2.14
CREBRF-201ENST00000296953 HSPG2P98160 4391 aa1.7□□□□□ -2.14
CREBRF-201ENST00000296953 PRKDCP78527 4128 aaKnown RBP1.7□□□□□ -2.14
CREBRF-201ENST00000296953 ANK2Q01484 3957 aa1.7□□□□□ -2.14
CREBRF-201ENST00000296953 XP32Q5T750 250 aa1.69□□□□□ -2.14
CREBRF-201ENST00000296953 ASPMQ8IZT6 3477 aa1.69□□□□□ -2.14
CREBRF-201ENST00000296953 SPEGQ15772 3267 aa1.69□□□□□ -2.14
CREBRF-201ENST00000296953 PLAC4Q8WY50 150 aa1.69□□□□□ -2.14
CREBRF-201ENST00000296953 FAT4Q6V0I7 4981 aa1.69□□□□□ -2.14
CREBRF-201ENST00000296953 NDUFAF8A1L188 74 aa1.69□□□□□ -2.14
CREBRF-201ENST00000296953 FBN2P35556 2912 aa1.69□□□□□ -2.14
CREBRF-201ENST00000296953 MUC2Q02817 5179 aa1.68□□□□□ -2.14
CREBRF-201ENST00000296953 KRTAP9-6A0A140TA67 174 aa1.68□□□□□ -2.14
CREBRF-201ENST00000296953 TNP1P09430 55 aa1.66□□□□□ -2.14
CREBRF-201ENST00000296953 KRTAP2-2Q9BYT5 123 aa1.66□□□□□ -2.14
CREBRF-201ENST00000296953 KRTAP19-4Q3LI73 84 aa1.65□□□□□ -2.14
CREBRF-201ENST00000296953 KRTAP19-1Q8IUB9 90 aa1.65□□□□□ -2.14
CREBRF-201ENST00000296953 LRP1Q07954 4544 aaKnown RBP1.65□□□□□ -2.14
CREBRF-201ENST00000296953 KRTAP1-5Q9BYS1 174 aa1.65□□□□□ -2.14
CREBRF-201ENST00000296953 Q8N1X5 172 aa1.65□□□□□ -2.15
CREBRF-201ENST00000296953 LPAP08519 4548 aa1.65□□□□□ -2.15
CREBRF-201ENST00000296953 USH2AO75445 5202 aa1.65□□□□□ -2.15
CREBRF-201ENST00000296953 VPS13CQ709C8 3753 aa1.65□□□□□ -2.15
CREBRF-201ENST00000296953 R4GN34 69 aa1.65□□□□□ -2.15
CREBRF-201ENST00000296953 INE1O15225 51 aa1.65□□□□□ -2.15
CREBRF-201ENST00000296953 FAT1Q14517 4588 aa1.65□□□□□ -2.15
CREBRF-201ENST00000296953 KRTAP10-3P60369 221 aa1.64□□□□□ -2.15
CREBRF-201ENST00000296953 AKAP9Q99996 3911 aa1.64□□□□□ -2.15
CREBRF-201ENST00000296953 KRTAP10-11P60412 298 aa1.64□□□□□ -2.15
CREBRF-201ENST00000296953 S4R3F8 94 aa1.64□□□□□ -2.15
CREBRF-201ENST00000296953 LAMA5O15230 3695 aa1.64□□□□□ -2.15
CREBRF-201ENST00000296953 DNHD1Q96M86 4753 aa1.64□□□□□ -2.15
CREBRF-201ENST00000296953 Q5VSD8 79 aa1.63□□□□□ -2.15
CREBRF-201ENST00000296953 PRO2289Q9P1D8 64 aa1.63□□□□□ -2.15
CREBRF-201ENST00000296953 APOBP04114 4563 aaKnown RBP1.62□□□□□ -2.15
CREBRF-201ENST00000296953 HECTD4Q9Y4D8 3996 aa1.62□□□□□ -2.15
CREBRF-201ENST00000296953 KRTAP13-2Q52LG2 175 aa1.62□□□□□ -2.15
CREBRF-201ENST00000296953 LYSTQ99698 3801 aa1.62□□□□□ -2.15
CREBRF-201ENST00000296953 KRTAP1-4P0C5Y4 121 aa1.61□□□□□ -2.15
CREBRF-201ENST00000296953 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
CREBRF-201ENST00000296953 MDN1Q9NU22 5596 aa1.6□□□□□ -2.15
CREBRF-201ENST00000296953 FAT2Q9NYQ8 4349 aa1.6□□□□□ -2.15
CREBRF-201ENST00000296953 KRTAP12-2P59991 146 aa1.6□□□□□ -2.15
CREBRF-201ENST00000296953 SMG1Q96Q15 3661 aaKnown RBP1.6□□□□□ -2.15
CREBRF-201ENST00000296953 KRTAP4-8A0A0G2JLE6 195 aa1.59□□□□□ -2.15
CREBRF-201ENST00000296953 KRTAP19-2Q3LHN2 52 aa1.59□□□□□ -2.15
CREBRF-201ENST00000296953 PKD1P98161 4303 aa1.59□□□□□ -2.16
CREBRF-201ENST00000296953 KRTAP4-2Q9BYR5 136 aa1.58□□□□□ -2.16
CREBRF-201ENST00000296953 KRTAP10-6P60371 365 aaPredicted RBP1.57□□□□□ -2.16
CREBRF-201ENST00000296953 KRTAP13-4Q3LI77 160 aa1.57□□□□□ -2.16
CREBRF-201ENST00000296953 TPRXLQ17RH7 258 aa1.57□□□□□ -2.16
CREBRF-201ENST00000296953 KMT2AQ03164 3969 aa1.56□□□□□ -2.16
CREBRF-201ENST00000296953 ZNF469Q96JG9 3925 aaPredicted RBP1.56□□□□□ -2.16
CREBRF-201ENST00000296953 FAT3Q8TDW7 4589 aa1.56□□□□□ -2.16
CREBRF-201ENST00000296953 A0A0D9SG42 100 aa1.55□□□□□ -2.16
CREBRF-201ENST00000296953 M0R2T5 61 aa1.55□□□□□ -2.16
CREBRF-201ENST00000296953 LRP2P98164 4655 aa1.54□□□□□ -2.16
CREBRF-201ENST00000296953 KRTAP3-1Q9BYR8 98 aa1.54□□□□□ -2.16
CREBRF-201ENST00000296953 SMR3AQ99954 134 aa1.54□□□□□ -2.16
CREBRF-201ENST00000296953 KRTAP10-8P60410 259 aa1.53□□□□□ -2.16
CREBRF-201ENST00000296953 KRTAP12-1P59990 96 aa1.53□□□□□ -2.17
CREBRF-201ENST00000296953 TNXBP22105 4242 aa1.53□□□□□ -2.17
CREBRF-201ENST00000296953 KRTAP10-1P60331 282 aa1.53□□□□□ -2.17
CREBRF-201ENST00000296953 C10orf95Q9H7T3 257 aa1.52□□□□□ -2.17
CREBRF-201ENST00000296953 SVEP1Q4LDE5 3571 aa1.52□□□□□ -2.17
CREBRF-201ENST00000296953 DNAH7Q8WXX0 4024 aa1.52□□□□□ -2.17
CREBRF-201ENST00000296953 CSMD2Q7Z408 3487 aa1.51□□□□□ -2.17
CREBRF-201ENST00000296953 MUC17Q685J3 4493 aa1.51□□□□□ -2.17
CREBRF-201ENST00000296953 CSMD1Q96PZ7 3565 aa1.51□□□□□ -2.17
CREBRF-201ENST00000296953 KRTAP4-7Q9BYR0 210 aa1.51□□□□□ -2.17
CREBRF-201ENST00000296953 FLGP20930 4061 aaPredicted RBP1.5□□□□□ -2.17
CREBRF-201ENST00000296953 KMT2DO14686 5537 aa1.5□□□□□ -2.17
CREBRF-201ENST00000296953 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
CREBRF-201ENST00000296953 VPS13BQ7Z7G8 4022 aa1.49□□□□□ -2.17
CREBRF-201ENST00000296953 FRAS1Q86XX4 4008 aa1.48□□□□□ -2.17
CREBRF-201ENST00000296953 KRTAP4-9Q9BYQ8 210 aa1.48□□□□□ -2.17
CREBRF-201ENST00000296953 KRTAP10-2P60368 255 aa1.47□□□□□ -2.17
CREBRF-201ENST00000296953 PKHD1P08F94 4074 aa1.46□□□□□ -2.18
CREBRF-201ENST00000296953 KRTAP2-3P0C7H8 128 aa1.46□□□□□ -2.18
CREBRF-201ENST00000296953 KRTAP2-4Q9BYR9 128 aa1.46□□□□□ -2.18
CREBRF-201ENST00000296953 KRTAP2-1Q9BYU5 128 aa1.46□□□□□ -2.18
CREBRF-201ENST00000296953 CSMD3Q7Z407 3707 aa1.45□□□□□ -2.18
CREBRF-201ENST00000296953 MT3P25713 68 aa1.44□□□□□ -2.18
CREBRF-201ENST00000296953 CUBNO60494 3623 aa1.44□□□□□ -2.18
CREBRF-201ENST00000296953 KRTAP8-1Q8IUC2 63 aa1.43□□□□□ -2.18
CREBRF-201ENST00000296953 KRTAP9-7A8MTY7 169 aa1.4□□□□□ -2.19
CREBRF-201ENST00000296953 MUC12Q9UKN1 5478 aa1.39□□□□□ -2.19
CREBRF-201ENST00000296953 KRTAP4-11Q9BYQ6 195 aa1.39□□□□□ -2.19
CREBRF-201ENST00000296953 KRTAP10-12P60413 245 aa1.39□□□□□ -2.19
CREBRF-201ENST00000296953 LCE4AQ5TA78 99 aa1.38□□□□□ -2.19
CREBRF-201ENST00000296953 KRTAP5-3Q6L8H2 238 aa1.38□□□□□ -2.19
CREBRF-201ENST00000296953 KRTAP10-4P60372 401 aaPredicted RBP1.38□□□□□ -2.19
CREBRF-201ENST00000296953 SMR3BP02814 79 aaPredicted RBP1.37□□□□□ -2.19
CREBRF-201ENST00000296953 FCGBPQ9Y6R7 5405 aaPredicted RBP1.34□□□□□ -2.2
CREBRF-201ENST00000296953 KRTAP9-3Q9BYQ3 159 aa1.34□□□□□ -2.2
CREBRF-201ENST00000296953 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.2
CREBRF-201ENST00000296953 KRTAP10-5P60370 271 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms