RNA–Protein interactions for RNA: ENST00000296946.6

T-201, Transcript of Brachyury protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene T, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-201ENST00000296946 TYMSOSQ8TAI1 123 aa9.92□□□□□ -0.82
T-201ENST00000296946 H0YAA0 97 aa9.9□□□□□ -0.82
T-201ENST00000296946 KRTAP25-1Q3LHN0 102 aa9.88□□□□□ -0.83
T-201ENST00000296946 A0A1B0GU33 70 aa9.86□□□□□ -0.83
T-201ENST00000296946 LINC00304Q8N9R0 145 aa9.85□□□□□ -0.83
T-201ENST00000296946 DMBT1Q9UGM3 2413 aaPredicted RBP9.81□□□□□ -0.84
T-201ENST00000296946 KRTAP10-8P60410 259 aa9.8□□□□□ -0.84
T-201ENST00000296946 H1FX-AS1Q4G0G2 97 aa9.79□□□□□ -0.84
T-201ENST00000296946 MT1HL1P0DM35 61 aa9.76□□□□□ -0.85
T-201ENST00000296946 PCLOQ9Y6V0 5065 aa9.76□□□□□ -0.85
T-201ENST00000296946 RPS29P62273 56 aaKnown RBP9.75□□□□□ -0.85
T-201ENST00000296946 K7ERS5 55 aa9.74□□□□□ -0.85
T-201ENST00000296946 ROMO1P60602 79 aa9.73□□□□□ -0.85
T-201ENST00000296946 KRTAP3-1Q9BYR8 98 aa9.66□□□□□ -0.86
T-201ENST00000296946 C20orf166-AS1Q96NR2 134 aa9.66□□□□□ -0.86
T-201ENST00000296946 C9orf92A6NGG3 77 aa9.57□□□□□ -0.88
T-201ENST00000296946 COX6B2Q6YFQ2 88 aa9.56□□□□□ -0.88
T-201ENST00000296946 HERC1Q15751 4861 aa9.56□□□□□ -0.88
T-201ENST00000296946 A0A0A0MQY5 61 aa9.52□□□□□ -0.89
T-201ENST00000296946 CRIPTQ9P021 101 aa9.51□□□□□ -0.89
T-201ENST00000296946 J3QL48 77 aa9.5□□□□□ -0.89
T-201ENST00000296946 LPAP08519 4548 aa9.47□□□□□ -0.89
T-201ENST00000296946 P0C880 135 aa9.45□□□□□ -0.9
T-201ENST00000296946 RPL37P61927 97 aaKnown RBP9.45□□□□□ -0.9
T-201ENST00000296946 LRP2P98164 4655 aa9.35□□□□□ -0.91
T-201ENST00000296946 KRTAP10-6P60371 365 aaPredicted RBP9.32□□□□□ -0.92
T-201ENST00000296946 SPINT4Q6UDR6 99 aa9.3□□□□□ -0.92
T-201ENST00000296946 HMCN2Q8NDA2 5059 aa9.29□□□□□ -0.92
T-201ENST00000296946 A0A0D9SG42 100 aa9.26□□□□□ -0.93
T-201ENST00000296946 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
T-201ENST00000296946 KRTAP13-4Q3LI77 160 aa9.25□□□□□ -0.93
T-201ENST00000296946 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
T-201ENST00000296946 XP32Q5T750 250 aa9.2□□□□□ -0.94
T-201ENST00000296946 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
T-201ENST00000296946 S4R3F8 94 aa9.16□□□□□ -0.94
T-201ENST00000296946 C10orf95Q9H7T3 257 aa9.11□□□□□ -0.95
T-201ENST00000296946 KRTAP15-1Q3LI76 137 aa9.08□□□□□ -0.96
T-201ENST00000296946 NDUFAF8A1L188 74 aa9.07□□□□□ -0.96
T-201ENST00000296946 MUC2Q02817 5179 aa9.06□□□□□ -0.96
T-201ENST00000296946 KRTAP12-2P59991 146 aa9.02□□□□□ -0.97
T-201ENST00000296946 UBR4Q5T4S7 5183 aa9.01□□□□□ -0.97
T-201ENST00000296946 KRTAP12-1P59990 96 aa8.94□□□□□ -0.98
T-201ENST00000296946 MUC17Q685J3 4493 aa8.91□□□□□ -0.98
T-201ENST00000296946 RNF213Q63HN8 5207 aa8.89□□□□□ -0.99
T-201ENST00000296946 M0QZ58 72 aa8.88□□□□□ -0.99
T-201ENST00000296946 KRTAP4-1Q9BYQ7 146 aa8.86□□□□□ -0.99
T-201ENST00000296946 SEC61BP60468 96 aaKnown RBP8.82□□□□□ -1
T-201ENST00000296946 LUZP6Q538Z0 58 aa8.71□□□□□ -1.02
T-201ENST00000296946 FAT4Q6V0I7 4981 aa8.67□□□□□ -1.02
T-201ENST00000296946 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
T-201ENST00000296946 R4GN34 69 aa8.54□□□□□ -1.04
T-201ENST00000296946 PLAC4Q8WY50 150 aa8.53□□□□□ -1.04
T-201ENST00000296946 FLGP20930 4061 aaPredicted RBP8.45□□□□□ -1.06
T-201ENST00000296946 LCE2CQ5TA81 110 aa8.42□□□□□ -1.06
T-201ENST00000296946 PP632Q6XCG6 107 aa8.34□□□□□ -1.07
T-201ENST00000296946 MT1HP80294 61 aa8.23□□□□□ -1.09
T-201ENST00000296946 LORP23490 312 aaPredicted RBP8.22□□□□□ -1.09
T-201ENST00000296946 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
T-201ENST00000296946 M0R2T5 61 aa8.11□□□□□ -1.11
T-201ENST00000296946 LCE2AQ5TA79 106 aaPredicted RBP8.01□□□□□ -1.13
T-201ENST00000296946 KRTAP23-1A1A580 65 aa7.97□□□□□ -1.13
T-201ENST00000296946 TNP1P09430 55 aa7.93□□□□□ -1.14
T-201ENST00000296946 KRTAP9-8Q9BYQ0 159 aa7.92□□□□□ -1.14
T-201ENST00000296946 MT2AP02795 61 aa7.87□□□□□ -1.15
T-201ENST00000296946 SPRR5A0A1B0GTR4 108 aa7.86□□□□□ -1.15
T-201ENST00000296946 MT1FP04733 61 aa7.84□□□□□ -1.15
T-201ENST00000296946 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
T-201ENST00000296946 KRTAP19-1Q8IUB9 90 aa7.64□□□□□ -1.19
T-201ENST00000296946 KRTAP9-3Q9BYQ3 159 aa7.62□□□□□ -1.19
T-201ENST00000296946 USH2AO75445 5202 aa7.58□□□□□ -1.2
T-201ENST00000296946 SPRR2GQ9BYE4 73 aa7.58□□□□□ -1.2
T-201ENST00000296946 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
T-201ENST00000296946 LCE2BO14633 110 aa7.49□□□□□ -1.21
T-201ENST00000296946 FSIP2Q5CZC0 6907 aa7.44□□□□□ -1.22
T-201ENST00000296946 KRTAP19-8Q3LI54 63 aa7.39□□□□□ -1.23
T-201ENST00000296946 MT1BP07438 61 aa7.38□□□□□ -1.23
T-201ENST00000296946 LCE3AQ5TA76 89 aa7.37□□□□□ -1.23
T-201ENST00000296946 INE1O15225 51 aa7.34□□□□□ -1.23
T-201ENST00000296946 SSPOA2VEC9 5147 aa7.29□□□□□ -1.24
T-201ENST00000296946 LCE2DQ5TA82 110 aaPredicted RBP7.24□□□□□ -1.25
T-201ENST00000296946 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
T-201ENST00000296946 KRTAP9-2Q9BYQ4 174 aa7.14□□□□□ -1.27
T-201ENST00000296946 MT1XP80297 61 aa7.11□□□□□ -1.27
T-201ENST00000296946 KRTAP10-5P60370 271 aa7.09□□□□□ -1.27
T-201ENST00000296946 KRTAP12-3P60328 96 aa7.04□□□□□ -1.28
T-201ENST00000296946 FCGBPQ9Y6R7 5405 aaPredicted RBP6.98□□□□□ -1.29
T-201ENST00000296946 KRTAP10-12P60413 245 aa6.97□□□□□ -1.29
T-201ENST00000296946 KRTAP19-6Q3LI70 58 aa6.96□□□□□ -1.3
T-201ENST00000296946 KMT2DO14686 5537 aa6.93□□□□□ -1.3
T-201ENST00000296946 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
T-201ENST00000296946 CRCT1Q9UGL9 99 aa6.84□□□□□ -1.32
T-201ENST00000296946 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
T-201ENST00000296946 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
T-201ENST00000296946 MACF1Q9UPN3 7388 aaKnown RBP6.67□□□□□ -1.34
T-201ENST00000296946 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
T-201ENST00000296946 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
T-201ENST00000296946 KRTAP19-5Q3LI72 72 aa6.57□□□□□ -1.36
T-201ENST00000296946 SYNE2Q8WXH0 6885 aaKnown RBP6.55□□□□□ -1.36
T-201ENST00000296946 MUC12Q9UKN1 5478 aa6.42□□□□□ -1.38
T-201ENST00000296946 KRTAP2-3P0C7H8 128 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms