RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 COL5A1-AS1Q5SY13 56 aa8.55□□□□□ -1.04
CXCL3-201ENST00000296026 IMUPQ9GZP8 106 aa8.55□□□□□ -1.04
CXCL3-201ENST00000296026 TRAV22A0A0B4J277 110 aa8.48□□□□□ -1.05
CXCL3-201ENST00000296026 LOC101927531A0A1B0GV80 90 aa8.47□□□□□ -1.05
CXCL3-201ENST00000296026 ETDBQ3ZM63 59 aa8.42□□□□□ -1.06
CXCL3-201ENST00000296026 GTF2H5Q6ZYL4 71 aa8.42□□□□□ -1.06
CXCL3-201ENST00000296026 KMT2DO14686 5537 aa8.42□□□□□ -1.06
CXCL3-201ENST00000296026 F8W1H4 67 aa8.41□□□□□ -1.06
CXCL3-201ENST00000296026 NDUFC1O43677 76 aa8.4□□□□□ -1.06
CXCL3-201ENST00000296026 H0YAA0 97 aa8.39□□□□□ -1.07
CXCL3-201ENST00000296026 KRTAP4-12Q9BQ66 201 aa8.36□□□□□ -1.07
CXCL3-201ENST00000296026 LCE3BQ5TA77 95 aa8.35□□□□□ -1.07
CXCL3-201ENST00000296026 MDN1Q9NU22 5596 aa8.34□□□□□ -1.07
CXCL3-201ENST00000296026 H0Y9P7 68 aa8.32□□□□□ -1.08
CXCL3-201ENST00000296026 UQCRQO14949 82 aa8.31□□□□□ -1.08
CXCL3-201ENST00000296026 ADM2Q7Z4H4 148 aa8.31□□□□□ -1.08
CXCL3-201ENST00000296026 A8MUN3 132 aa8.3□□□□□ -1.08
CXCL3-201ENST00000296026 ATOX1O00244 68 aa8.29□□□□□ -1.08
CXCL3-201ENST00000296026 ACYP1P07311 99 aa8.28□□□□□ -1.08
CXCL3-201ENST00000296026 KRTAP2-3P0C7H8 128 aa8.28□□□□□ -1.08
CXCL3-201ENST00000296026 SPRR2FQ96RM1 72 aa8.28□□□□□ -1.08
CXCL3-201ENST00000296026 KRTAP2-4Q9BYR9 128 aa8.28□□□□□ -1.08
CXCL3-201ENST00000296026 PRO2289Q9P1D8 64 aa8.28□□□□□ -1.08
CXCL3-201ENST00000296026 HIST1H4AP62805 103 aaKnown RBP8.27□□□□□ -1.09
CXCL3-201ENST00000296026 MT1XP80297 61 aa8.25□□□□□ -1.09
CXCL3-201ENST00000296026 ATP5EP2Q5VTU8 51 aa8.24□□□□□ -1.09
CXCL3-201ENST00000296026 KRTAP9-9Q9BYP9 154 aa8.23□□□□□ -1.09
CXCL3-201ENST00000296026 KRTAP9-4Q9BYQ2 154 aa8.23□□□□□ -1.09
CXCL3-201ENST00000296026 SPRR2EP22531 72 aa8.22□□□□□ -1.09
CXCL3-201ENST00000296026 SPRR2BP35325 72 aa8.22□□□□□ -1.09
CXCL3-201ENST00000296026 SPRR2AP35326 72 aa8.22□□□□□ -1.09
CXCL3-201ENST00000296026 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
CXCL3-201ENST00000296026 FAM240AA0A1B0GVK7 77 aa8.18□□□□□ -1.1
CXCL3-201ENST00000296026 KRTAP8-1Q8IUC2 63 aa8.16□□□□□ -1.1
CXCL3-201ENST00000296026 LINC00208Q96KT6 92 aa8.16□□□□□ -1.1
CXCL3-201ENST00000296026 PCP4L1A6NKN8 68 aa8.12□□□□□ -1.11
CXCL3-201ENST00000296026 R4GN34 69 aa8.12□□□□□ -1.11
CXCL3-201ENST00000296026 KRTAP4-8A0A0G2JLE6 195 aa8.09□□□□□ -1.11
CXCL3-201ENST00000296026 KRTAP12-2P59991 146 aa8.09□□□□□ -1.11
CXCL3-201ENST00000296026 P0C880 135 aa8.08□□□□□ -1.12
CXCL3-201ENST00000296026 LCE1AQ5T7P2 110 aa8.07□□□□□ -1.12
CXCL3-201ENST00000296026 MP68P56378 58 aa8.06□□□□□ -1.12
CXCL3-201ENST00000296026 M0QZ58 72 aa8.05□□□□□ -1.12
CXCL3-201ENST00000296026 C20orf197Q8N268 126 aa8.05□□□□□ -1.12
CXCL3-201ENST00000296026 LINC00643Q86TS7 51 aa8.03□□□□□ -1.12
CXCL3-201ENST00000296026 OCR1Q9BZK8 76 aa8.03□□□□□ -1.12
CXCL3-201ENST00000296026 KRTAP2-2Q9BYT5 123 aa7.99□□□□□ -1.13
CXCL3-201ENST00000296026 KRTAP2-1Q9BYU5 128 aa7.99□□□□□ -1.13
CXCL3-201ENST00000296026 LINC01554Q52M75 96 aa7.96□□□□□ -1.14
CXCL3-201ENST00000296026 SPRR2DP22532 72 aa7.95□□□□□ -1.14
CXCL3-201ENST00000296026 DMAC1Q96GE9 116 aa7.93□□□□□ -1.14
CXCL3-201ENST00000296026 H3BPC8 53 aa7.89□□□□□ -1.15
CXCL3-201ENST00000296026 KRTAP10-7P60409 375 aaPredicted RBP7.87□□□□□ -1.15
CXCL3-201ENST00000296026 KRTAP10-12P60413 245 aa7.83□□□□□ -1.16
CXCL3-201ENST00000296026 KRTAP4-7Q9BYR0 210 aa7.81□□□□□ -1.16
CXCL3-201ENST00000296026 LCE1DQ5T752 114 aa7.8□□□□□ -1.16
CXCL3-201ENST00000296026 TRAV7A0A075B6U4 112 aa7.76□□□□□ -1.17
CXCL3-201ENST00000296026 SCGB1A1P11684 91 aa7.75□□□□□ -1.17
CXCL3-201ENST00000296026 MT-ATP8P03928 68 aa7.74□□□□□ -1.17
CXCL3-201ENST00000296026 ACYP2P14621 99 aa7.69□□□□□ -1.18
CXCL3-201ENST00000296026 SPTSSBQ8NFR3 76 aa7.65□□□□□ -1.18
CXCL3-201ENST00000296026 A0A1B0GV90 55 aa7.64□□□□□ -1.19
CXCL3-201ENST00000296026 J3QR89 54 aa7.61□□□□□ -1.19
CXCL3-201ENST00000296026 KRTAP4-9Q9BYQ8 210 aa7.61□□□□□ -1.19
CXCL3-201ENST00000296026 CHKB-CPT1BH3BT56 60 aa7.55□□□□□ -1.2
CXCL3-201ENST00000296026 KRTAP4-2Q9BYR5 136 aa7.51□□□□□ -1.21
CXCL3-201ENST00000296026 LCE4AQ5TA78 99 aa7.49□□□□□ -1.21
CXCL3-201ENST00000296026 SMIM20Q8N5G0 67 aa7.45□□□□□ -1.22
CXCL3-201ENST00000296026 KRTAP13-4Q3LI77 160 aa7.44□□□□□ -1.22
CXCL3-201ENST00000296026 CAMK2N1Q7Z7J9 78 aa7.43□□□□□ -1.22
CXCL3-201ENST00000296026 LCE5AQ5TCM9 118 aa7.38□□□□□ -1.23
CXCL3-201ENST00000296026 KRTAP19-7Q3SYF9 63 aa7.37□□□□□ -1.23
CXCL3-201ENST00000296026 SNURFQ9Y675 71 aa7.37□□□□□ -1.23
CXCL3-201ENST00000296026 MT1EP04732 61 aa7.32□□□□□ -1.24
CXCL3-201ENST00000296026 KRTAP19-3Q7Z4W3 81 aa7.32□□□□□ -1.24
CXCL3-201ENST00000296026 KRTAP4-11Q9BYQ6 195 aa7.32□□□□□ -1.24
CXCL3-201ENST00000296026 SPANXA2-OT1Q8N9U9 137 aa7.3□□□□□ -1.24
CXCL3-201ENST00000296026 DSTQ03001 7570 aaKnown RBP7.27□□□□□ -1.25
CXCL3-201ENST00000296026 KRTAP19-4Q3LI73 84 aa7.26□□□□□ -1.25
CXCL3-201ENST00000296026 A0A0D9SG42 100 aa7.19□□□□□ -1.26
CXCL3-201ENST00000296026 K7ERU9 68 aa7.19□□□□□ -1.26
CXCL3-201ENST00000296026 H3BS24 57 aa7.17□□□□□ -1.26
CXCL3-201ENST00000296026 CYSTM1Q9H1C7 97 aa7.17□□□□□ -1.26
CXCL3-201ENST00000296026 GPR98Q8WXG9 6306 aa7.17□□□□□ -1.26
CXCL3-201ENST00000296026 COA5Q86WW8 74 aa7.13□□□□□ -1.27
CXCL3-201ENST00000296026 MT1GP13640 62 aa7.12□□□□□ -1.27
CXCL3-201ENST00000296026 SEC61GP60059 68 aa7.12□□□□□ -1.27
CXCL3-201ENST00000296026 KRTAP19-5Q3LI72 72 aa7.12□□□□□ -1.27
CXCL3-201ENST00000296026 SERP1Q9Y6X1 66 aa7.12□□□□□ -1.27
CXCL3-201ENST00000296026 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
CXCL3-201ENST00000296026 SPINT4Q6UDR6 99 aa7.11□□□□□ -1.27
CXCL3-201ENST00000296026 SERP2Q8N6R1 65 aa7.11□□□□□ -1.27
CXCL3-201ENST00000296026 PP632Q6XCG6 107 aa7.06□□□□□ -1.28
CXCL3-201ENST00000296026 A0A1B0GU33 70 aa7.03□□□□□ -1.28
CXCL3-201ENST00000296026 KRTAP12-1P59990 96 aa7.03□□□□□ -1.28
CXCL3-201ENST00000296026 MT1MQ8N339 61 aa7□□□□□ -1.29
CXCL3-201ENST00000296026 MT4P47944 62 aa6.98□□□□□ -1.29
CXCL3-201ENST00000296026 KRTAP5-3Q6L8H2 238 aa6.98□□□□□ -1.29
CXCL3-201ENST00000296026 MT1LQ93083 61 aa6.96□□□□□ -1.3
CXCL3-201ENST00000296026 HMCN1Q96RW7 5635 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 432.7 ms