RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 CHKB-CPT1BH3BT56 60 aa5.05□□□□□ -1.6
CLRN1-201ENST00000295911 PRO0628Q9UI54 55 aa5.05□□□□□ -1.6
CLRN1-201ENST00000295911 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
CLRN1-201ENST00000295911 A8MUN3 132 aa5.04□□□□□ -1.6
CLRN1-201ENST00000295911 BRK1Q8WUW1 75 aa5.03□□□□□ -1.6
CLRN1-201ENST00000295911 PRR15LQ9BU68 103 aa5.03□□□□□ -1.6
CLRN1-201ENST00000295911 FLG2Q5D862 2391 aaPredicted RBP5.02□□□□□ -1.61
CLRN1-201ENST00000295911 Q75L30 129 aa5.02□□□□□ -1.61
CLRN1-201ENST00000295911 Q5VV11 94 aa5.01□□□□□ -1.61
CLRN1-201ENST00000295911 FAT1Q14517 4588 aa4.99□□□□□ -1.61
CLRN1-201ENST00000295911 KMT2CQ8NEZ4 4911 aaKnown RBP4.99□□□□□ -1.61
CLRN1-201ENST00000295911 SPINK7P58062 85 aa4.95□□□□□ -1.62
CLRN1-201ENST00000295911 HSPG2P98160 4391 aa4.94□□□□□ -1.62
CLRN1-201ENST00000295911 ATP11AUNQ6ZP68 121 aa4.94□□□□□ -1.62
CLRN1-201ENST00000295911 SPTSSBQ8NFR3 76 aa4.94□□□□□ -1.62
CLRN1-201ENST00000295911 A6NED7 52 aa4.93□□□□□ -1.62
CLRN1-201ENST00000295911 MT1HL1P0DM35 61 aa4.92□□□□□ -1.62
CLRN1-201ENST00000295911 A0A1B0GU69 56 aa4.91□□□□□ -1.62
CLRN1-201ENST00000295911 RPL37P61927 97 aaKnown RBP4.91□□□□□ -1.62
CLRN1-201ENST00000295911 TNXBP22105 4242 aa4.91□□□□□ -1.62
CLRN1-201ENST00000295911 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
CLRN1-201ENST00000295911 RYR1P21817 5038 aa4.87□□□□□ -1.63
CLRN1-201ENST00000295911 COX6B2Q6YFQ2 88 aa4.87□□□□□ -1.63
CLRN1-201ENST00000295911 DMBT1Q9UGM3 2413 aaPredicted RBP4.86□□□□□ -1.63
CLRN1-201ENST00000295911 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
CLRN1-201ENST00000295911 FAT3Q8TDW7 4589 aa4.85□□□□□ -1.63
CLRN1-201ENST00000295911 SEC61GP60059 68 aa4.85□□□□□ -1.63
CLRN1-201ENST00000295911 LCA10Q71F78 164 aa4.85□□□□□ -1.63
CLRN1-201ENST00000295911 RYR3Q15413 4870 aa4.85□□□□□ -1.63
CLRN1-201ENST00000295911 TPRXLQ17RH7 258 aa4.82□□□□□ -1.64
CLRN1-201ENST00000295911 LRP1Q07954 4544 aaKnown RBP4.82□□□□□ -1.64
CLRN1-201ENST00000295911 UQCR11O14957 56 aa4.8□□□□□ -1.64
CLRN1-201ENST00000295911 A8MU10 97 aa4.79□□□□□ -1.64
CLRN1-201ENST00000295911 PMAIP1Q13794 54 aa4.78□□□□□ -1.64
CLRN1-201ENST00000295911 SPATA8Q6RVD6 105 aa4.78□□□□□ -1.64
CLRN1-201ENST00000295911 KIAA1109Q2LD37 5005 aa4.77□□□□□ -1.65
CLRN1-201ENST00000295911 MIR22HGQ0VDD5 57 aa4.76□□□□□ -1.65
CLRN1-201ENST00000295911 S4R3F8 94 aa4.71□□□□□ -1.66
CLRN1-201ENST00000295911 A0A1B0GU33 70 aa4.7□□□□□ -1.66
CLRN1-201ENST00000295911 A6NN06 94 aa4.7□□□□□ -1.66
CLRN1-201ENST00000295911 H1FX-AS1Q4G0G2 97 aa4.7□□□□□ -1.66
CLRN1-201ENST00000295911 RBM12B-AS1Q9P1G2 102 aa4.7□□□□□ -1.66
CLRN1-201ENST00000295911 EPPK1P58107 5090 aaKnown RBP4.69□□□□□ -1.66
CLRN1-201ENST00000295911 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
CLRN1-201ENST00000295911 MYCBP2O75592 4640 aa4.66□□□□□ -1.66
CLRN1-201ENST00000295911 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
CLRN1-201ENST00000295911 H0YAA0 97 aa4.61□□□□□ -1.67
CLRN1-201ENST00000295911 CSAG1Q6PB30 78 aa4.59□□□□□ -1.67
CLRN1-201ENST00000295911 KRTAP10-6P60371 365 aaPredicted RBP4.57□□□□□ -1.68
CLRN1-201ENST00000295911 K7ERS5 55 aa4.55□□□□□ -1.68
CLRN1-201ENST00000295911 LRP2P98164 4655 aa4.52□□□□□ -1.69
CLRN1-201ENST00000295911 ADM2Q7Z4H4 148 aa4.52□□□□□ -1.69
CLRN1-201ENST00000295911 ABCA13Q86UQ4 5058 aa4.51□□□□□ -1.69
CLRN1-201ENST00000295911 P0C880 135 aa4.49□□□□□ -1.69
CLRN1-201ENST00000295911 LPAP08519 4548 aa4.49□□□□□ -1.69
CLRN1-201ENST00000295911 M0QZ58 72 aa4.46□□□□□ -1.69
CLRN1-201ENST00000295911 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.69
CLRN1-201ENST00000295911 HERC2O95714 4834 aa4.46□□□□□ -1.7
CLRN1-201ENST00000295911 KRTAP13-4Q3LI77 160 aa4.46□□□□□ -1.7
CLRN1-201ENST00000295911 BIRC6Q9NR09 4857 aa4.46□□□□□ -1.7
CLRN1-201ENST00000295911 A0A0D9SG42 100 aa4.42□□□□□ -1.7
CLRN1-201ENST00000295911 MUC17Q685J3 4493 aa4.42□□□□□ -1.7
CLRN1-201ENST00000295911 KRTAP19-2Q3LHN2 52 aa4.4□□□□□ -1.7
CLRN1-201ENST00000295911 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
CLRN1-201ENST00000295911 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
CLRN1-201ENST00000295911 ROMO1P60602 79 aa4.36□□□□□ -1.71
CLRN1-201ENST00000295911 R4GN34 69 aa4.35□□□□□ -1.71
CLRN1-201ENST00000295911 KRTAP12-1P59990 96 aa4.33□□□□□ -1.72
CLRN1-201ENST00000295911 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
CLRN1-201ENST00000295911 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
CLRN1-201ENST00000295911 SPINT4Q6UDR6 99 aa4.32□□□□□ -1.72
CLRN1-201ENST00000295911 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
CLRN1-201ENST00000295911 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
CLRN1-201ENST00000295911 CRIPTQ9P021 101 aa4.27□□□□□ -1.73
CLRN1-201ENST00000295911 PCLOQ9Y6V0 5065 aa4.27□□□□□ -1.73
CLRN1-201ENST00000295911 LINC01554Q52M75 96 aa4.26□□□□□ -1.73
CLRN1-201ENST00000295911 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
CLRN1-201ENST00000295911 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
CLRN1-201ENST00000295911 HERC1Q15751 4861 aa4.2□□□□□ -1.74
CLRN1-201ENST00000295911 HMCN2Q8NDA2 5059 aa4.19□□□□□ -1.74
CLRN1-201ENST00000295911 UBR4Q5T4S7 5183 aa4.16□□□□□ -1.74
CLRN1-201ENST00000295911 M0R2T5 61 aa4.14□□□□□ -1.75
CLRN1-201ENST00000295911 MT1HP80294 61 aa4.12□□□□□ -1.75
CLRN1-201ENST00000295911 CAMK2N1Q7Z7J9 78 aa4.11□□□□□ -1.75
CLRN1-201ENST00000295911 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
CLRN1-201ENST00000295911 MUC2Q02817 5179 aa4.09□□□□□ -1.75
CLRN1-201ENST00000295911 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
CLRN1-201ENST00000295911 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
CLRN1-201ENST00000295911 PLAC4Q8WY50 150 aa4.03□□□□□ -1.76
CLRN1-201ENST00000295911 RNF213Q63HN8 5207 aa4.02□□□□□ -1.77
CLRN1-201ENST00000295911 KRTAP10-10P60014 251 aa4.02□□□□□ -1.77
CLRN1-201ENST00000295911 MT2AP02795 61 aa4.01□□□□□ -1.77
CLRN1-201ENST00000295911 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
CLRN1-201ENST00000295911 MT1FP04733 61 aa3.98□□□□□ -1.77
CLRN1-201ENST00000295911 NDUFAF8A1L188 74 aa3.96□□□□□ -1.77
CLRN1-201ENST00000295911 MT3P25713 68 aa3.96□□□□□ -1.77
CLRN1-201ENST00000295911 TNP1P09430 55 aa3.95□□□□□ -1.78
CLRN1-201ENST00000295911 KRTAP19-8Q3LI54 63 aa3.93□□□□□ -1.78
CLRN1-201ENST00000295911 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
CLRN1-201ENST00000295911 MT1BP07438 61 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms